Silurus meridionalis (southern catfish): 124382641
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Entry
124382641 CDS
T08004
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124382641 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124382641 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124382641 (si:ch211-269e2.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
124382641
NCBI-ProteinID:
XP_046700631
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Position
3:complement(15642840..15661566)
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AA seq
1174 aa
AA seq
DB search
MIAEPTLLSRRVQKENTSVDVPSCTSVNHASGVRNENRKKNVRGKRKARDGSENAKRKLS
KTNHGPFGRVENVQLKDGDMEAFTLFEVVSMGRSAMQAVVDDWIEAYVMDREPALLDLIS
FFIQCSGCKGVVTAEMFQSKEDSDVMSKMVEDLDEGSGLQYKRFLAFPWILTVTWPIDID
NGEYPLVMSGLYWKKFRSHFCEFVSVLISQCQYNVIFDNYLLNTLISLLTELSASHMRAF
RHTCTLAAVKLLSALVNVALNLSVSVENNQKLLEVELAKMSSKRASPRVDKIQKKITELK
DRKLEIEDMMDAIFKGVFLKRYRDVISEIRAICIEELAVWMKLYSAVFLNDTCLKYVGWL
MHDKQPDVRLKCVLGLQGLYQDVNLISKMDLFTSRFKERMISMILDKDHEVALQAMRLLM
TISQFCDDVLTQADYKHMFQFVYSIHRPLAAMAGEFLFTKLLSQPTMPVRRTGLSEEDRH
RELTLARVRALIQFYTENQLHQHVLYLVDSLWESGGPLLKDWAFFTSLLTVHPPLTDQAL
SSTEETLVIEILLASVRQAAEGPPLAGRSLGKKFISTKEKRLQTDDCAKLTEHFLKVLPD
LFSKYSGDAEKLTYFLKITQYFQMETCGDEHKESVQALLAGLEDAVDSHTEAALLEAAVR
SYHNLCANDSPWQHMAASAIGQLIQRWTHTLGSCLEDAVTAGTFIGGGDKNDKILSSLKK
LTAFNNAQDLTKWGTYELVSKLLVVESQNGGVPVEMITEALRCVCCCILWNLNNFGEGVT
SRESALYQRSQLRAFCEKCHRCLSHTEKVVREQAFMCLSDILVAHSYQLQMWDSSAGAPL
FYTPEPRLQKALLSFILEHIFTGPEPHSHSSTGSESKGGVSWPEDLHRRRNLLAAYCKLI
VHSVLEMSMAAEIFKHYMRYYNDFGDIIKETLNRTRQIDKIESARTLVLCLQQLYLRLKQ
EQDTGNMCSSGVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFQGFVQQSE
KHPPPYLSYLTILSEFSSKLLKPDKKTIYSYLQQYIGEQCISNREECWMPLIYYRTSLQG
TAEGEDAVSFISSDTNKQLSLTNRSRSPSIKPTASEGELRISQMSETKASKQQKSCVVLC
VAWSRESQKRLLCSERKRLISSQGSLVKKWTWIQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaccaacattactctcaagaagagtgcaaaaagagaacaccagtgttgat
gtcccttcctgcacatctgtgaatcatgcctctggtgtgagaaatgaaaacagaaagaag
aatgtgagagggaaaaggaaagcccgggatggctcggagaatgctaagcggaagctttca
aagaccaaccatggtccctttggcagagtggagaatgtgcagctcaaagatggagacatg
gaagccttcaccttgtttgaggtggtcagtatgggcaggagtgccatgcaggctgtggtt
gacgactggattgaggcttatgttatggacagagaaccagcacttcttgacctcatcagc
tttttcattcagtgttcaggatgcaaaggggtagtaactgctgagatgttccagagcaag
gaagattctgatgtcatgagcaaaatggtggaggacctggacgagggctcaggtttgcag
tataaaaggtttctggcatttccatggatactgactgtcacttggcccattgacattgac
aatggagagtatcctcttgtcatgtctgggctgtactggaaaaagttccgctctcacttt
tgtgagtttgtctcagtgctgatatcgcagtgtcaatataacgtgatctttgacaactac
ctcctgaacacactcatctctcttctgactgagctctcagcatcacatatgcgtgccttt
agacacacatgcacactggcagcagtaaagttgctcagcgctttagtgaatgtggcgctc
aatctcagtgttagcgtggagaacaaccagaaactccttgaggttgagctggctaagatg
tccagcaagcgagcctcaccacgggtggacaagatacagaagaagattactgagttgaag
gatagaaagctggaaatagaagacatgatggatgctatttttaaaggagtttttcttaaa
agatacagagatgtaatatccgagatcagggcgatctgtatagaagaactggctgtgtgg
atgaagctttacagtgccgtgtttcttaatgatacctgtctgaaatatgtaggatggttg
atgcatgacaagcaacctgacgtgcgcttgaagtgtgttttgggtctgcaaggactttat
caggacgttaatcttatctccaaaatggaccttttcaccagtcgatttaaggagagaatg
atctccatgattttggataaggaccatgaggttgcactgcaggcaatgaggctgctgatg
acaatttcccagttctgtgatgatgtgctgactcaggctgactacaagcacatgtttcaa
tttgtatactctattcatcgaccacttgcagccatggcaggggaatttctcttcaccaag
ttacttagtcagcctacaatgccagtgaggaggacaggattatctgaggaagacagacac
agagagctaactctggccagagtccgagctcttattcagttctacactgagaaccagctg
catcagcatgtgctgtatctagtggacagtctgtgggagagtggtggaccactgttaaag
gactgggccttttttacctctctgctcacagttcatccccccttaacggaccaagcttta
agcagcaccgaagagactctggtgattgagattcttttggcgtcagtaaggcaggctgct
gagggacctccactagcagggagaagcctggggaagaaatttatcagtacaaaagagaag
aggttgcagacagatgactgtgcaaaacttacagaacacttcttaaaggtgctccctgat
ctgttctccaagtactcaggagatgctgaaaaacttacgtatttcctcaaaataactcag
tactttcaaatggaaacatgtggcgatgaacacaaagagtctgtgcaggcactgctcgct
ggattagaagatgcagtggattctcacacagaggcagcactcctagaagcagctgttcgg
tcgtatcataacctctgtgcaaatgattcaccctggcagcacatggcagcttctgctata
ggacaactcatccaacgctggacacacacactgggctcatgcttagaagatgcagtaact
gctggaacttttattggagggggagacaaaaatgacaagattttgtccagtttgaaaaaa
ttaactgctttcaacaatgctcaggacctgactaaatggggaacatatgagctggtctct
aagctccttgtagttgagtcacagaatggaggtgtgccagtagagatgatcactgaggct
ctgcgctgtgtctgctgctgcatcctgtggaacctgaacaactttggagaaggagtgacc
tccagggagtcagctctctatcagaggagtcaactgcgagcgttttgtgaaaaatgccac
cgttgtctttcacacacggaaaaggtggtaagagaacaggcgttcatgtgtttgagcgat
atcctcgtagcccacagttaccagctgcagatgtgggattcatcagcaggtgctcctctg
ttctatacccctgaacccagactgcagaaagcactgcttagcttcattctagagcacatc
tttactggccctgaaccacacagccacagcagcacaggcagcgagagtaagggtggggtg
agctggccggaggacttgcaccggcggaggaatctgttggctgcctactgtaaactgata
gtgcacagtgtgcttgagatgagtatggctgctgagatcttcaagcactacatgaggtac
tacaatgactttggcgatattatcaaagaaactttgaaccgcactcgacaaatagacaag
atcgaaagcgcacgcaccctggtcctgtgccttcagcagctgtacctgcggttaaagcag
gagcaggacactgggaacatgtgcagttcaggagtgcagacctacagcagtatcaaagag
ctggccagacgcttctctctcacctttggctgggatcaaatcaaatcccgcgagtctctg
gccatgatccacagggatggcattgagtttgtttttcagggttttgttcagcagtcagag
aagcacccgccgccatacctctcttacctcaccatcctcagcgagttctccagtaagctg
ctcaaacctgacaagaagaccatatacagctatctgcagcagtacattggtgagcagtgc
atcagtaacagggaggagtgctggatgcctctcatctattacagaacgtctctccagggc
acagctgagggagaagatgccgtgtccttcatcagctctgacactaataaacagctctca
cttactaatcgctccagatcgccctccatcaaaccgactgcatctgaaggggagctacga
atctcacagatgtccgaaactaaagcgagcaaacagcagaagagttgtgttgtcctctgt
gtagcctggagccgagagtcacagaaaagattgctgtgctcagagaggaaacggttgata
tccagccaggggtcactggtgaagaagtggacgtggatacagtag
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