Silurus meridionalis (southern catfish): 124382642
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Entry
124382642 CDS
T08004
Symbol
ppp2r3b
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124382642 (ppp2r3b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124382642 (ppp2r3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124382642 (ppp2r3b)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124382642 (ppp2r3b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124382642 (ppp2r3b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124382642 (ppp2r3b)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124382642 (ppp2r3b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124382642 (ppp2r3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
124382642
NCBI-ProteinID:
XP_046700635
LinkDB
All DBs
Position
3:15620876..15641981
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AA seq
573 aa
AA seq
DB search
MPSHQGLQPVLKMKVDELFLNWLSEPNIQEMLKDYLRKVKNGDELELGKDNINLTENNNV
DSNYNMAERTSASFSAPCSPPSATLPSGSGIGSRAGPSSRAPRRSVSIKKAQLKKEEAVS
PALSETIPKFYFPRGQPKANINIDNLISKIEKIFSQFPSERVTIEDMGKVAKACECPLYW
KAPLFFAAGGDRRGYVSVHKFVAMWRKVLQTCHDDASKFLHLLAKPGCSYLEQEDFIPFL
QDVVDSLAGLAFLKEASDFHSRYITTVIQRIFYSVNRSWTGKITCSELRRSSFLQNVALL
EEEEDVNQLTEYFSYEHFYVIYCKFWELDTDHDLYIDQRDMARHNDQAISHRMIERIFSG
TVTRDRKVHKEGRLSYADFVWFLISEEDKKSETSIEYWFRCMDLDGDGILSMYELQYFYQ
EQCQKLETMAIEPLPFEDCLCQMLDLVRPETTGKITLRDLKRCKLAHIFFDTFFNIEKYL
DHEQRDPFMVAKDAESLGQEISDWERYAAEEYDILVAEEAANEQYNDGYENPLMPIDCLS
SEFDLYSEKRHLFEFTNPHCDLDLDEYKYADDF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcaccaaggattgcagccggtcctgaagatgaaggtggacgagctcttcctg
aattggttgagtgagcccaacatccaagagatgctaaaagactaccttaggaaggtcaag
aatggagacgagcttgagcttggaaaggacaacattaatttgactgaaaacaacaatgtt
gattcaaactataacatggccgagcggacttctgcatcttttagtgctccctgtagccct
ccttcagccaccctgccatctgggagtggcatcggtagcagagcaggaccaagcagcaga
gcaccgagacgctccgtcagcattaaaaaggctcagcttaagaaagaggaggccgtttca
ccagcattaagcgaaaccattccgaagttctatttccctcgagggcagcccaaagccaat
atcaacattgacaatctcatttccaagatagagaaaatattttctcagtttcccagtgaa
agagtaactattgaggatatggggaaggttgccaaggcctgtgaatgcccactctattgg
aaggctccattgttcttcgctgctgggggagacaggaggggatatgtgtctgttcacaaa
tttgtggcgatgtggagaaaagtgctacagacctgtcatgatgatgcctccaaatttcta
caccttctggccaagcctggctgctcttatttggagcaagaggactttattccatttctt
caggatgtggtggattcacttgcaggccttgcttttttgaaggaggcttcagactttcac
tcacgctacattaccacagtaattcagaggatattttatagcgtcaaccgatcatggacg
ggaaaaataacatgttcagagctgcggagaagcagttttcttcagaatgtggcactactg
gaagaggaggaagatgttaatcagctgactgagtacttttcctatgagcatttctatgtc
atctactgtaaattctgggagctggacactgaccacgatctgtatatagaccagagggac
atggcacggcacaacgatcaagccatctcccacagaatgattgaaagaatattctcagga
actgtaactagagacaggaaggttcataaagaaggccggttgagttatgctgactttgtg
tggtttctaatctctgaggaagacaaaaagtctgaaaccagcatagagtactggttccgg
tgtatggacctggatggtgatggaattctgtccatgtacgaattgcagtacttctatcag
gagcagtgtcagaaactggagaccatggccattgaaccactaccatttgaagactgcctc
tgccaaatgcttgatctggtcaggcctgagacaacgggaaaaatcacactccgtgacttg
aagagatgcaaactagctcatatattctttgacactttcttcaatatcgagaagtatctg
gatcatgagcagagggatccattcatggtggcaaaggatgctgagagcttgggacaggag
atttcagactgggaaagatatgctgcagaggagtatgatattttggtggccgaggaagct
gccaacgagcagtacaatgatggctatgagaaccccctgatgcccatcgactgcctctcc
agtgagtttgacctgtacagtgagaagaggcacttgtttgagtttactaaccctcactgt
gacctggacttggacgagtacaaatatgcagatgatttttga
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