Silurus meridionalis (southern catfish): 124382703
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Entry
124382703 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: germinal-center associated nuclear protein
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124382703
03036 Chromosome and associated proteins [BR:
smeo03036
]
124382703
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
124382703
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
124382703
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
124382703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
SAC3_GANP
CID_GANP
Nup35_RRM_2
RRM_PARP14_3
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124382703
NCBI-ProteinID:
XP_046700825
LinkDB
All DBs
Position
3:complement(22510175..22522413)
Genome browser
AA seq
2074 aa
AA seq
DB search
MNTNNVFGRQQGAFQTPNASQGSGLFQSLGQQGSSGTTPNIGFGQKSPFAQPSAFSQPPV
FAPGSAQPSVFGQTLSFGQPQAFGQGSGLGQSSSSQAPAFGQQSLGQATLGFGASPSSMG
QTPAFGQVQAFGPTSGFGQASGFGQKTSGFGISPSNSQLPSNPVGTGGSQLNFGQPSAFS
TTTSAVSGQSNTQTSGFGSKFSFNSSNETEMLFKPIFSSSPVPPSAQPLPGPESFVSVKP
VTVGSDSSRPGTTGASLFXSVKPSTLDFSFSKPGAVPSAPVPTSSMSKTAGGMMGGNTLQ
FAFSKPANPINSSSIATVAQSTSISSTPSAFSFSAKVIQPQMASDHSSFAFSVSKPEENP
EVKNESSGEAGFANLGKGMKRKEEPSEPNSSQGKSSKVEEAQGESIGPRHPSKRPLIRSR
GATGGLFINALSGLIKTSGSTAKKEARTIDKAPGERPDLPVADVEAPLTPQRPQAPIRHV
LEKGEKPDSEPEGETCTPSRRVAREDSTDSLASLSPSEPSTVIQCKGIPPNLNRKDIVKK
HFGRFGKVHRVYCRPEKNLAIVHFHDHASAAVAKKKGKHFQGTDVHIFWQRKKLSPGTKR
EKPSEVKDVVCAEEESRTEGTHLSPLRKPLPRSPVVSTSLVKGSPSMRSSVAKTLQFDID
PQQDTSSEGQNVERLVAMPLSLQPLIGQIAETAEEKYCLLEQRDKILRQLRPKRTDLDLS
KVFVGTCPDMCPEKERYMRETRKQLSVFELVSDAERVDHCAAVKEYSRSSADQEEPLSHE
LRPLPVLSMTMNYLITQIMDQGEGNYRDWYDFVWNRTRGIRKDITQQHLCDPVTVSLIEK
CTRFHIHCAHHLCQEPMMSFDAKINNENMTKCLQSLKEMYQDLATKEVYCHNEAEFRQYN
VLLKLNDGDILREIQQFRKEVRDSVEVKFAVQAFSALNSNNFVRFFKLVKAASYLSGCIL
HRYFNQVRSAALKALNVAFTVSSQRSTIFPVEDLVQMLMFRNASEATEFLQLYGLSVADG
MVELSRTAYQEPDLPIPSKKSVAIEKKKTVLIGEVVNGGPLPNPPMHKPVCSFDSNNKYR
GDLSSLESLPTATKVKPLVELDSRPQLKPKLLAETKLFMEPPAVVELAQHEVIQDTGESS
QHVVPVLPVNPQLMFQPIAQPQPVRPPTPKRELVYSDQDVMVEVESVVEEILADEVLDVA
KAGAQYVSVALSVSESELQAMVNEVVFQMLRELSTSEITAEKARIAEEKRRLEEERRRKE
REAFLDKLSLELCGEISEEVLTQCTREMAAKEIKLAQEEKAARVAQCTEVVCNNLVEETL
DMEIACLVREVLDAQLRQIQKFIKRWRDVVAVRRQLKRQMRGFPAAPCCVDPRFKLKALV
PSAPSFPSMDTLARGLISLGNAGNMVVSCTRLLKTRNDTIRQMRVDYYYNLLLSERVWSP
LDLPTLVAESTPNPPDRIFWKATLMLPSDQDNDMSSTLTNWLKVKLGGEESMEESMAESE
GKLNTLVISNSLRDIGQKTHKVHLCIKVSYGPLNEEGQSQLEEQNELLGTSSLLMLLPAL
PCSGLDEEDVPLLSALLQLKQVQQASGWNTALPLVLLIPEQLDKKVDDQKLEQVLKLKSL
VQDGLISEYIFIHLTGSVTDLQGSKQIAKAVRWLIAHSPASTVLSSQPLLQFVERGLCRE
FYQRFLHDKHERAKANLPCQEPEAVIHLYNTVLAYLADVVSSESLVGISWPPPEFSFPEN
RELVPHLDWNSPQHLSWLKRAILRLQMPEWEWPPKNAPWTHLCSRIFEYVSQIPSCAQSQ
PLLMSQLEHLLARVRAQHVRRDCEDEECDGPSFNNLPWDDILILCIEHRLRDWHIAESPV
VADAFTDKGEVLVYYYKEQLKDFVPPESWVAAERRTHTEKQQNTVRSKLSSTPILTSAAW
FPRHKLFQSVIETGEKSSVLDISHTPSPQELLPQKLLSSIQQEKAQSQRFEEKLQRWLEV
DPLDSVSIPLFVPSTLLSMPKFLLPKQHPSARAACITQEAEIEDPAAVASANRKKGPVSL
TQRLKELNRLVIANREEELACSLKLNSLLEIIED
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaacaatgtctttggtagacaacaaggtgctttccagacgcctaatgccagt
cagggtagtggcctcttccagtcacttggtcagcaaggttcaagcggcactacaccgaat
attggctttgggcagaagtcaccgtttgctcagccttcagctttcagtcagccaccagtt
tttgctccaggatctgcacaaccatcggtttttggccagacgttatcatttggtcagcca
caggcttttggtcaaggtagtggtttaggacaatcatcctcttctcaagcaccggctttt
ggacagcaatctttgggtcaggcaacacttggatttggagcatcaccatcttctatggga
caaactcctgcctttggtcaggtgcaagcgtttggtccaacctctggatttggtcaggct
tcgggatttggacaaaagacatctggatttggtatttcccccagtaactcacagctgcct
agtaatcctgttggcactggaggctctcagcttaacttcggtcagccatcggctttttct
actacaacttctgctgttagtggccagagcaatacacagacaagtggctttgggtccaaa
tttagctttaattcttcaaatgaaacagaaatgctcttcaaacctattttcagttcgagt
ccagtacctcctagtgcccaacctcttccaggtcctgagtcttttgtttcagttaaacca
gttacagttggttcagacagcagtcgacctggtaccactggtgcctcacttttcnagagt
gtaaaaccaagcactctggattttagcttctccaaacctggagcagttccttctgcacca
gttccaacttctagcatgtctaagactgcaggtggaatgatgggtggaaacactctccag
tttgcgttctctaaaccagccaatcctatcaacagcagcagcattgccactgttgctcag
tccactagcatttccagcactccttctgcatttagcttctcagcaaaagtaattcagccc
cagatggcttctgaccactcatcatttgcatttagtgtttcaaaacctgaagagaacccg
gaggtgaaaaatgagagctcaggggaagcaggttttgcaaatcttgggaagggcatgaaa
cgaaaagaagaacccagtgaaccaaatagtagtcaaggaaaaagttccaaagtcgaggaa
gcacaaggtgaatctataggccctagacacccatccaagcgtccccttattaggagtcgt
ggagctacaggtggactttttataaatgcattgagtggtctaattaagacatcaggaagc
acagctaaaaaagaagcacgaaccattgataaggctcctggagaaagaccagaccttcca
gttgcagatgtggaggctccactgaccccacagagacctcaagctcctattagacatgtt
ctggaaaaaggagagaagcctgattccgagcctgaaggtgagacttgtaccccatctcga
agggttgcccgtgaagacagcaccgatagcctggccagtctttccccctctgaacccagc
actgtcattcaatgcaagggaatcccacccaacctcaaccggaaagacattgtcaaaaaa
cattttggtcgcttcgggaaagtccacagagtgtactgcagacctgaaaagaatctcgct
atcgtgcattttcacgatcacgcatctgcagcagtagcaaaaaagaaggggaaacatttt
caagggactgatgtgcatatattttggcaaagaaagaaactaagcccaggcacaaaaaga
gagaaaccttcagaagtcaaagatgtggtttgtgcagaagaggagtcgaggacagagggc
actcacctcagcccattacgaaaaccgttgcccagatcccctgttgtcagcacctcactt
gttaagggatctccatccatgaggtcctctgtagctaaaaccctccagtttgatattgac
cctcagcaggatacaagctcagagggtcagaatgtagagcgactagtggccatgccgtta
tccctccagcccctgatcggtcaaatagctgaaacagcagaggaaaagtactgccttctt
gaacagagagacaagattcttcgccagttgaggccaaagagaacggacttggacttgtcc
aaagtatttgtgggcacgtgtccggatatgtgcccagagaaggagcgctacatgagagaa
actcgcaaacaactcagcgttttcgagcttgtttctgatgcagaaagggtggaccattgt
gctgccgttaaagaatacagcaggtcctcggctgaccaggaggaacctctctctcatgag
ctacggcctctgccagttctaagcatgacaatgaactacttgatcacacagataatggac
cagggtgaggggaactacagagactggtacgactttgtctggaacagaaccagaggaatt
cgtaaggatattacccagcagcacctctgtgacccagtgactgtgtctctaatagaaaag
tgcactcgatttcacatccactgtgctcatcatctgtgccaggagcctatgatgtccttt
gatgccaagattaataatgagaacatgaccaagtgcctccagagtctgaaagagatgtat
caagacctggcaaccaaggaggtgtattgccataatgaggcagagttccgccagtacaat
gttctgcttaaactcaacgatggtgatattcttcgtgagattcagcagtttcgcaaagag
gtccgtgactctgtggaggtgaagtttgcagtccaagctttttcagctcttaacagcaac
aactttgtccgattcttcaagttggtgaaagcagcatcttatctatctggctgcattctt
cacagatactttaaccaagtaaggagtgctgcactgaaagccttgaatgttgccttcact
gtaagctctcagagatccaccattttccctgtggaagacttggttcaaatgctaatgttt
cgcaatgcttctgaagccactgaatttctgcagctttacggacttagcgtcgcagatggc
atggtcgagctgagccgtactgcatatcaggagccggacttacccattccttcaaagaag
tcagttgccattgagaagaagaaaaccgtgctgatcggggaggttgtgaatggaggccca
ctgcccaacccgccaatgcataaaccagtctgcagctttgactcaaacaacaaatacagg
ggggatttatcttccttggagtcattacccacagccacaaaagtaaaacccctggttgaa
ctggactcaaggcctcagctcaaacccaagttgctggctgagacaaagctgtttatggag
ccccctgctgtggtagagctggcccagcacgaagtgatacaagacactggggagtcctca
caacacgttgtaccagtcctcccagtaaacccacagctcatgttccagcccattgctcag
ccccagcctgtcaggcccccaactccaaagagagaactagtctactcagaccaggatgta
atggttgaagtagagtctgtggtggaggagattctggcagatgaagtcttagacgttgcg
aaagctggtgctcagtatgtctctgtagctttgagtgtgagtgagagtgagctgcaggca
atggtcaatgaggtggtttttcagatgctcagagagctgtctacttcagagatcactgca
gagaaggcgcgaatcgctgaggagaaacgcaggctggaggaagagaggcggagaaaggaa
cgagaggccttcctggacaagctgagcttagagctttgtggtgaaatcagtgaggaggtt
cttacgcagtgcaccagggaaatggctgcaaaggaaataaaacttgcacaggaggagaag
gctgcacgtgtggctcaatgcacagaggtggtgtgcaacaacttggtggaggaaacacta
gacatggagattgcctgcctggtcagagaggtgttggatgcacaattgcgacagatacaa
aagtttattaagaggtggcgtgacgtggttgcagtacgtcgacagttgaagaggcagatg
cgtggattccctgcagccccatgctgcgtcgatccacgtttcaagctgaaagctttggtc
ccgagtgccccatccttcccatctatggacacacttgctcgaggtctcattagcctaggc
aatgcagggaacatggttgtgtcctgcacaaggttactaaaaacaagaaatgacaccatc
cgccagatgcgagtagactactattacaatttgttattaagtgagcgtgtgtggtctcct
ctcgacctgcccactctggtggccgaaagcactcctaatccacctgacagaatcttctgg
aaagccactctcatgcttcccagtgaccaggacaatgacatgagcagcacgctgaccaat
tggcttaaagttaagctaggtggtgaggaaagtatggaggagagcatggcagagtcagaa
gggaaactcaatacactggtcatcagtaacagcttgagagatattggacaaaagacccac
aaggttcacctctgcataaaggtaagctatggtcctctgaacgaggaagggcagagccag
ctggaggaacagaatgagctcctaggtaccagctccctgctgatgctcctcccagctctg
ccgtgcagtgggctggatgaggaagacgtacccctgctctccgcactcctccaactaaag
caggtccagcaagccagcggatggaacactgcactgcccctggtgttgctcattcctgaa
caacttgataaaaaagtcgatgaccagaagttagaacaagttcttaagctgaagtcatta
gttcaagatgggctgatttcagaatacatctttatccatctcacgggtagtgtcactgat
ctgcaaggatccaaacagattgccaaagctgttcgctggctgattgcccactctccagcc
tctacagtcctctcctctcagcctctgctgcagtttgtagaaagagggctgtgtcgtgag
ttttaccagcggttccttcatgacaagcatgaaagagcaaaagccaatctgccatgccag
gagccagaagcagtcatccatctctataacaccgtgctggcctatctggcggatgtggtc
agctctgagagtctagttggaatctcctggcccccacctgaattctcttttcctgagaac
agagagcttgtaccacatctggactggaattcccctcagcacctgtcctggctgaaaaga
gcaatcctcagactgcagatgcctgagtgggagtggcctcctaaaaatgctccatggacc
catttgtgctcacgcatatttgagtacgtctctcagatccccagctgtgcccaaagccag
ccccttctcatgtcacaactggagcacctgctagcaagagtacgtgctcaacacgtgcga
cgagactgtgaggatgaggagtgtgatgggccttcttttaataacctaccctgggatgac
attttgatcctttgcatagagcaccggctgagagactggcatatagctgaaagtccagta
gtagcggacgctttcactgacaaaggagaggttttggtgtactactacaaagagcagctt
aaagactttgttcctccagaaagctgggtagcagcagagagacgcactcacacagagaag
cagcagaacacagtaaggtcaaagctgagctccacgcccattctaacatcagcagcatgg
tttcccagacacaaactgttccagagtgtgatagagacaggggagaagtcctctgtgtta
gacatctcacacactccttcacctcaggagctgttacctcaaaaactgctctctagcatt
cagcaggaaaaggctcaaagtcagaggtttgaagaaaagctgcaacgttggttagaagtg
gatcctctggactcagtctccatacctctgtttgtgccttccacattgttatccatgccc
aagtttcttcttcccaaacagcatcccagtgcacgtgctgcctgcatcacacaggaagca
gaaattgaagaccctgctgcagtggcttccgctaatagaaaaaagggacctgtgtctcta
acacaacgactgaaagagctcaatagactggtgatagcaaatcgagaggaggagctggca
tgcagtctgaagctaaacagcctactggagattatagaggattga
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integrated database retrieval system
