Silurus meridionalis (southern catfish): 124382750
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Entry
124382750 CDS
T08004
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124382750 (adarb1b)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124382750 (adarb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
124382750
NCBI-ProteinID:
XP_046700916
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All DBs
Position
3:22797058..22967839
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AA seq
748 aa
AA seq
DB search
MALLLDCPPCVGAYYCLMRTRFKRRRKKRSERKGGAGERQARAQQKLFTMDVDEEENMSS
CSTDVKENRNLDNVSSKEGASMPEQLPNGSGGGGRKRPLEEGNNGHAHPKFRPKKRKKTP
GPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNA
AEKALRSFVQFPNASEAHLAMGRTLTINTDFTSDQADFPDMLFNGFETPAPQEDSFYLGS
NSNGSLNPLGEYPIPPVTGTNSLAQAPLLPPSTFNTSSSGKNPVMILNELRPGLKYEFVS
ESGESHAKNFVMSVTVDSQTFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPRE
GLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVST
GTKCINGEYMSDRGLALNDCHAEIIARRSLLRYLYMQLEYFLSNCKDEHEKSIFTRCEKH
GYRLKDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIP
VRSNNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYFSSIILGSLYH
ADHLSRAMYQRIADIEHLPQQFTLNRPLLSGISNAEARQPGKAPNFSVNWAVGDQALEVI
NATTGKDDMGRPSRLCKHTLYSRWVRLHTKLSSSLRIKVAKPSSYHEAKQAAVEYHDAKQ
TLIKSFQKAGLGAWVKKPIEQDQFSLSS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctactggactgcccgccctgcgtgggtgcctactactgcctcatgaggacc
cggttcaagaggaggcgcaagaaacgatccgagcgcaaaggtggagccggggagcggcag
gctcgggcgcagcagaagctcttcactatggatgtggatgaggaagagaatatgagttcc
tgcagcaccgacgtcaaagaaaaccgcaacctggacaacgtctcctccaaggagggggca
agtatgcccgaacagctccccaacggcagcggaggaggcgggcggaagcgccccttggag
gagggcaataatggtcatgcacaccccaagttcaggcccaagaagcgtaagaaaactcca
gggccagttcttccaaagaacgctcttatgcagcttaatgagatcaagcctggtctgcag
tacaagctactttctcagactgggccagtccatgcccctgtatttgtcatgactgttgag
gtgaatgggcaactttttgaaggttctggccccactaagaaaaaggcaaagctgaacgca
gctgagaaagcactacgctcttttgtgcagttcccaaacgcttcagaggcgcacctggcc
atgggtcgaacactcaccatcaacacagacttcacctcagaccaagccgactttcccgac
atgctctttaatggctttgagactcctgcgccccaggaggactctttttacctgggctca
aactccaatggttccctaaacccacttggagaatacccaattcccccagtgactggtacc
aacagcttggcccaagccccgctgcttcctccctccacttttaacacatcgtccagcgga
aagaaccctgtcatgatcctgaatgaactgcggccgggcctgaagtatgagttcgtgtcc
gagagtggcgagagccacgctaaaaactttgtcatgtccgtgaccgtcgactcccagacc
ttcgagggatcagggaggaataaaaaactggccaaggctcgtgccgctcaagctgcgctc
tctgctctcttcaacatgcagctggaccagacaccatctcgccagccaatccccagagag
ggcctacagctacacctgccccaggttttagcagatgccgtctcacgtctcgttgtggac
aagttcagcgagctcactgacaacttcacctcccctcacgcacggaggaaagtgctggct
ggggttgtcatgacaacaggcactgacgtgaaggaggcccaggtgatctgcgtctccact
ggaaccaagtgcataaatggcgagtacatgagcgaccgtggcctggcacttaacgactgc
catgctgaaatcatcgcccgccgctctctgcttcgctacctatacatgcagctggagtac
ttcctcagtaactgcaaagatgagcacgagaagtccatttttacccggtgtgagaaacat
ggctaccggctcaaggacaacgttcagtttcacctgtacatcagcacgtcaccatgtgga
gacgctcgcatcttctccccacacgaggcaggcgtagaagatcagggagacagacacccg
aaccggaaagctcggggtcaactgagaactaagatcgagtcgggcgagggcaccatccca
gtgcgttccaacaacaccattcagacatgggatggagttctgcagggggagagacttctc
acgatgtcgtgcagtgacaagatcgccaggtggaacgtggtgggaatccagggatcgctg
atgagctacttcactgagcccatctacttctcgagcatcatcctgggcagcctgtaccac
gctgatcatctctctcgagccatgtaccagcgcatcgcagacatcgaacacctgccccag
caatttaccctcaaccgacccctgctcagtggaattagtaatgccgaagcacggcagcca
ggaaaagctcctaacttcagtgtgaactgggcagtgggtgaccaagctttagaggtcatt
aacgccaccacgggtaaggacgacatgggacggccatctcgtctctgcaagcacacgctc
tacagccgctgggttcgactgcacacaaagctctcgtcctccctgcggatcaaagtggcc
aagccgagctcataccatgaagccaagcaagcagcagtggagtatcacgacgccaagcag
acgctcatcaagtccttccagaaagcaggattgggggcctgggtgaaaaagcctatagaa
caggaccagttctctctgagctcctga
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