Silurus meridionalis (southern catfish): 124382839
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Entry
124382839 CDS
T08004
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124382839 (aff3)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124382839 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
124382839
NCBI-ProteinID:
XP_046701071
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All DBs
Position
3:complement(12381142..12400919)
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AA seq
1174 aa
AA seq
DB search
MTHSWPSQQHPVGGGTERFLYSDSKEGKRRNTQHKQVRNDAPIRMPRVAPHKSMLADDLK
LSSDEDESDKGPHQNTSWSENQNLSGQHTHTHGRRARHSSSGSSGSDSSSESRSSSQRSR
SPSPEAETQPEIPSQPLPHAFSKENQDPSLTHWQLDKWLEKVHKTQLSDQDPGGGHSSGA
GFDSDRGPSPGRYWERDSGLGTRESYSPSQSPVPSPKFDYSPRHSHRSSPGYSPCPSPGT
SPVPSPVPSVCPSPGASLRISRSPSPLPLHPPRSPSPGLTSAPASPRITSYTQVHQEHSR
LTTQTTFTSCPERQPKVRPWLPPDHNTQRINESRQKNSRQPVFSQHHSKQSSTIKETPHK
PKFQSSESRSKPRSSPAPHQSHSSSRSHLSPKTKARHLSSTAHIQRSSDHNSKLSQSLNS
QSKPNPTSKLRTETSSHSAHSSSSRPTPRSALDISGRSLSKPSSRLSLSTKPKPKSREES
VPGTKTSQKEQKQREREPDLNSQGKAQVRTHIQSTEVQRHRRLAEEQLTRQRWVQSSGEE
EEEEERRKEQGERERKRRRRKEHNTEWQAVQPKQRPHTSHNSQYQPRPESSGPEREDQKR
KKRRRSSEEHSSNPGVIESNPSPPLSPPSPTPVVRPTRQPVTSSSSSSSSSSSSSSSSES
DSEPRLPPNVAKVPADSTSSQRPAPRQRHQEQCRPSVLRSNDISPDEGQQLPGKHKLYTL
VPFGRTEKSTAVSHRGLRNLVVKIDLSLLSRVPNTSEVPHRGSSSSSSSSSSAKAKEKTS
MRHQYHQDQKSGDAKIKRKAENGETQRESKRSHVHTEKLAVSMHSADTEKQDAHSNRQND
HHADYIYTKKPLSPLSPPSASKMAHSDQQHTNPPRDRDSTVKKTQQIQKARPKVEVECAG
VSGNTQPPSGNWAPSSKEPSYRGTVPYTDVSHHAEYYMHEAKRLKHRADAMVDKLGKAVN
YVDAALSFMECGKAMEEGPLEAKSPYTMYAETVELIRYAMRLKNHTSSGARQEDKQLAVL
CFRCLALLYWQMFRLKKDHALKYSKALTDYFKTLPKLPDMPPPWSDTKKGNGPPTCISPG
GLTGSQPATTFNYPFINIPYRIHQMAANHLNITNSVLYSYEYWEVADTLAKENKEFFNYL
NTLTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacccactcctggccttcccagcagcacccagttggagggggcacagaacggtttctg
tattcagattcaaaagagggaaaacgccgcaacactcagcacaagcaagtaaggaatgat
gcccctataaggatgccacgtgtggctcctcacaaatccatgcttgctgatgacctgaag
ctcagtagtgatgaggatgaaagtgacaagggacctcaccaaaatacatcctggtcagaa
aatcaaaacctgtcagggcagcacacacacacacatggcaggagggcaagacattccagc
tcaggctcctcaggatctgattcctccagtgagtctcggagcagtagccagcggtcacgc
agcccaagcccagaagcagagactcaacctgagatccccagccagccactgcctcatgcc
ttcagcaaagagaatcaggatccctccttgacacactggcagttggacaagtggcttgag
aaagttcacaaaacccaactgtcagatcaagacccaggaggaggtcacagctctggtgca
ggctttgattctgatagaggaccatctccaggaagatactgggagagagattctggcttg
ggaacaagagaaagttatagcccaagccagagccctgtccccagccctaagtttgactat
agtcccaggcacagtcatcgatctagtccgggatatagcccttgtccaagcccaggaact
agccctgtgccaagcccggtgccaagtgtttgtccaagcccaggtgctagtctaagaata
agtagaagtcccagtccgttacctcttcacccacccagaagccctagccctggtctcaca
tctgctcctgcctctccaagaattacgtcttatactcaggttcaccaggagcattccaga
cttactacacagactacatttacttcttgtcctgagcgtcagcctaaggtcagaccatgg
ttgccaccagaccataacactcaacgtattaatgagtctagacaaaaaaattctagacaa
cctgttttctcacagcatcattccaaacaaagctcaactatcaaagagactccacacaag
ccaaaattccaaagcagcgaatctagatcaaaacctaggtctagtcctgctccacatcag
tctcattctagctccaggtcccacctcagccccaaaacaaaggccaggcacttgtcttcc
actgcacatatccaaagatccagtgatcataacagcaaattgagtcagagtttaaattcc
cagtcaaagcccaaccccacatccaaacttaggactgagacaagcagtcactcggctcac
agttccagttctaggccaacacctcggtctgccctagacatttcaggtaggtctctctca
aaacctagctcaagacttagccttagcacaaaaccaaaaccaaaatccagagaagaatct
gtgcctggcactaagacttctcaaaaggagcaaaagcagagggaacgagagccagatttg
aatagccagggtaaggcccaggtaagaactcacatccaatctacagaagttcaaagacat
aggagactggcggaggagcagctaacaaggcaacgctgggttcagagttctggagaagaa
gaggaggaagaggaacggagaaaagagcaaggagagagagaaaggaagaggaggaggagg
aaggaacataatactgaatggcaagcagtacagcccaagcagagaccccacactagtcac
aacagtcagtatcagccccgacctgaaagcagtggacctgagcgggaagaccagaagagg
aagaagaggaggaggagcagtgaagaacactcatccaaccctggagttatagagtccaac
ccttctcctccattatccccaccctctcctactccagttgtccgacctacacggcaacct
gttacctcttcttcttcctcttcttcttcttcgtcttcgtcttcatcttcctccgaatcc
gactctgagcccaggctgcctccaaacgttgccaaagtaccagcagactctacatccagc
cagagaccggcaccaaggcagaggcatcaggagcagtgcagaccctctgtgctgagatca
aatgacatttctcccgatgaagggcaacagcttccaggcaaacacaaactctacacactg
gtgccatttggccgtactgaaaagtccaccgctgtatctcatcgaggactaaggaacctt
gtagtcaaaatagacctctcacttctgtccagagttcctaacacaagtgaggttccacac
agaggatcttcatcatcatcatcatcatcatcatcagctaaagctaaagaaaagacatcc
atgaggcatcagtaccatcaagaccaaaaatctggagatgccaaaatcaaacggaaggct
gagaatggagagactcaaagggagagtaagagaagccatgtgcacaccgaaaagctcgca
gtttccatgcactcagctgacactgaaaagcaggacgctcattccaacagacagaatgac
catcatgcagattatatttataccaagaagccactgtcaccactctctcctccatctgct
tcaaagatggcacattcagatcagcaacacacaaacccaccaagagacagagactccact
gtgaaaaaaacacagcagatacaaaaagctcggcccaaggttgaagtggaatgtgctgga
gtgtcaggaaacacacagcccccttctggaaactgggctccatcctcaaaggaaccatcc
tacagaggaactgtgccttacactgatgtctcacaccatgcagagtactacatgcatgaa
gcgaaaagactgaagcaccgagctgatgctatggtggataaactagggaaagctgtgaat
tatgtggatgctgctttgtcgtttatggagtgtggcaaggccatggaagaagggcccctg
gaagctaagtctccttatacaatgtatgcagaaactgtggagcttattagatatgccatg
aggctaaagaatcacaccagctctggagccaggcaggaggacaaacagctggctgtactt
tgtttccgttgtcttgctcttctgtattggcaaatgtttcggctgaaaaaagaccatgcc
ctgaaatactccaaagctttgacagactacttcaagactttaccaaaactgcctgacatg
ccacctccctggagtgataccaaaaagggaaatggtcctccaacttgcatatcccctggt
ggtttaactgggtcccaacctgccaccactttcaactaccctttcattaacattccctat
cgtatccaccagatggcagcaaatcacctcaatatcaccaacagtgtgctttacagttat
gagtactgggaggtagctgataccttggccaaggaaaacaaagagttttttaactacttg
aacacactgactggacctctgacgctacacagcagcatggctcatattgtccagtacaca
agacaagggctacagtggataaggattagtgccaatttgtcctag
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