KEGG   Silurus meridionalis (southern catfish): 124382843
Entry
124382843         CDS       T08004                                 
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
  KO
K10523  speckle-type POZ protein
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    124382843 (spopla)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124382843 (spopla)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     124382843 (spopla)
SSDB
Motif
Pfam: MATH_2 BTB BACK_BPM_SPOP MATH BTB_2 BTB_KLHL33 CR_prot_dom_plant
Other DBs
NCBI-GeneID: 124382843
NCBI-ProteinID: XP_046701087
LinkDB
Position
3:1433431..1449393
AA seq 399 aa
MSRVLTPPPPPPPPPSQGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLK
SSTFSSGPTDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREE
TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDETNGLLPDDKLTLFCEVSVVQDSVNISGQ
SNTNMLKVPECQLSDDLGNLWECSRFTDCTLCVGGQEFQAHKSILAARSPVFNAMFEHEM
EESKKNRVDIRDIEPDVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEESL
CSSLCVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKYSNSNHAADIMET
SGWKAMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtcacgtgtccttactcctcctcctcctcctcctccccctccctctcagggagagatg
agcagcggtccagtggccgagagctggtgctacacgcaagtaaaagtagtgaaattctcc
tacatgtggaccattaacaacttcagcttctgccgagaggagatgggtgaagtactgaaa
agctccaccttctcttcagggcccactgacaagatgaaatggtgcctcagagtaaaccca
aaaggtctggatgatgaaagcaaagactacctgtcactgtatcttctcctggttagctgt
ccaaaaagtgaagtgcgtgcaaagtttaagttttctttactcaacgctaagcgagaggag
actaaagctatggaaagccaaagagcctatcgattcgtccagggcaaagactggggcttc
aagaagtttatccgaagagattttcttctcgatgaaacaaacggccttcttccagatgac
aagctcaccctgttctgtgaggtgagtgtagtgcaggactctgtaaatatctcaggtcag
tcgaacacaaacatgctgaaagttcctgagtgccaactctcagatgatctggggaatctg
tgggagtgttcacgcttcactgactgcacactgtgtgtgggggggcaggagttccaggcc
cacaaatccattctcgcagcgagatctccggtttttaacgccatgtttgagcacgagatg
gaggagagcaagaagaaccgggtggacatcagggacatcgagccggacgtgtttaaagaa
atgatggggtttatatacacggggaaagcgccgaatctggagaaaatggccgacagtttg
ttggcagcggctgataaatacgctctggagcgtttaaaggtgatgtgtgaggagtccctg
tgcagcagcctgtgcgtggagaacgtcgccgacacgctcatccttgccgacctgcacagc
gccgagcagctcaaagctcaagccatcgattttatcaacaggtgcagcgtcctcagacag
ctgggctgcaaggatggaaaatactcgaatagcaaccacgctgcagatataatggagact
tcgggctggaaggcaatgatccagtctcatcctcacttagtggccgaggctttccgagct
ctcgcctcggctcagtgccctccgttcggcctgcccaggaagaggctcaagcagtcctga

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