Silurus meridionalis (southern catfish): 124382843
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Entry
124382843 CDS
T08004
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124382843 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124382843 (spopla)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124382843 (spopla)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
124382843
NCBI-ProteinID:
XP_046701087
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Position
3:1433431..1449393
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AA seq
399 aa
AA seq
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MSRVLTPPPPPPPPPSQGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLK
SSTFSSGPTDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREE
TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDETNGLLPDDKLTLFCEVSVVQDSVNISGQ
SNTNMLKVPECQLSDDLGNLWECSRFTDCTLCVGGQEFQAHKSILAARSPVFNAMFEHEM
EESKKNRVDIRDIEPDVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEESL
CSSLCVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKYSNSNHAADIMET
SGWKAMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgtccttactcctcctcctcctcctcctccccctccctctcagggagagatg
agcagcggtccagtggccgagagctggtgctacacgcaagtaaaagtagtgaaattctcc
tacatgtggaccattaacaacttcagcttctgccgagaggagatgggtgaagtactgaaa
agctccaccttctcttcagggcccactgacaagatgaaatggtgcctcagagtaaaccca
aaaggtctggatgatgaaagcaaagactacctgtcactgtatcttctcctggttagctgt
ccaaaaagtgaagtgcgtgcaaagtttaagttttctttactcaacgctaagcgagaggag
actaaagctatggaaagccaaagagcctatcgattcgtccagggcaaagactggggcttc
aagaagtttatccgaagagattttcttctcgatgaaacaaacggccttcttccagatgac
aagctcaccctgttctgtgaggtgagtgtagtgcaggactctgtaaatatctcaggtcag
tcgaacacaaacatgctgaaagttcctgagtgccaactctcagatgatctggggaatctg
tgggagtgttcacgcttcactgactgcacactgtgtgtgggggggcaggagttccaggcc
cacaaatccattctcgcagcgagatctccggtttttaacgccatgtttgagcacgagatg
gaggagagcaagaagaaccgggtggacatcagggacatcgagccggacgtgtttaaagaa
atgatggggtttatatacacggggaaagcgccgaatctggagaaaatggccgacagtttg
ttggcagcggctgataaatacgctctggagcgtttaaaggtgatgtgtgaggagtccctg
tgcagcagcctgtgcgtggagaacgtcgccgacacgctcatccttgccgacctgcacagc
gccgagcagctcaaagctcaagccatcgattttatcaacaggtgcagcgtcctcagacag
ctgggctgcaaggatggaaaatactcgaatagcaaccacgctgcagatataatggagact
tcgggctggaaggcaatgatccagtctcatcctcacttagtggccgaggctttccgagct
ctcgcctcggctcagtgccctccgttcggcctgcccaggaagaggctcaagcagtcctga
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