Silurus meridionalis (southern catfish): 124382854
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Entry
124382854 CDS
T08004
Symbol
dop1b
Name
(RefSeq) LOW QUALITY PROTEIN: protein dopey-2
KO
K26680
protein dopey
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124382854 (dop1b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
Others
124382854 (dop1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOP1
Dopey_N
DOP1_C
TPR_DOP1_M
Motif
Other DBs
NCBI-GeneID:
124382854
NCBI-ProteinID:
XP_046701102
LinkDB
All DBs
Position
3:complement(9824476..9849698)
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AA seq
2285 aa
AA seq
DB search
MMDPEEAELQNDYRYRSYAAVIEKALRNFESSSEWADLISSLGKLNKALQSNLKYSLLPR
RLIIGKRLAQCLHPALPSGVHLKALETYEIIFKIIGTKWLARDLFIYSSGLFPLLSHAAM
TVKMAVLTLYERYFLPLQKALLPSLQAFIMGLLPGLEEGLEVYDRTDALLVKLSLLVGQS
VFYGALWGAALVCPLVRLPASLFIVTHFDRMASSREQKHMLGNDHRLAVKATCLSLQDTN
VLVQRNMLEILLNFFPFAACLDPVTCSVPLKREEMITVVSAASLTLLRRDMSLNRRLYAW
LLGLDIKGGMVAPDTTLYATVEEHTAHYFNTHSREMLVQALVNILQQKDIEKDPDNVMNY
LRPFRIMISLLDKPEIGPLVVSDVLLEVIRTFYSYCQELLGMELLNSSHSGNHLTSKIKE
NKHISEIIKTVNMLVGAMSSEYLWDYMTKRFLTCLSGLSDHTGLSSAKAWSPSPSVSELS
NLIIFLLDVIPLELYAEIQTQYLPQMLGSMLQSVCAHMDSLSLAELTQTLRACFKVLSKI
QMPVSYMDMNVESRTHVKETNVAVSDIKNNETHNHTSDDKFKEDEVAINGQDAQETGPEV
AMFPSLRSEDSGLGLSASPSEQQLPPGRDSSSPASGVCTKAEDVWRKGGSVENMSKCIQD
ILVSVITRHLLVVVDPEKQKKQEEATQAVQGASRRSKTRSSSGSEGNRDLGLIRDRLAEL
FIPGKLREQQAFTDDKGKSSGHELFQWTEGFQPRGKGEISEACRNAFTAACHLLLESTTF
PVYYTEKESQELHSNMFENTTGNKEGSLPEWLRSLMTLCCISKDYQVQHAAISSLLELIN
HSQSLALVIQDKNQRYKRSEANPLSGQLQMVTLPPIYPAVLKTMELHTDFYQRAAQVLWS
QLDTERKEQHISCVELFYRLHCLAPSTAICEDIICMALLSRDKVVCLDALHRFSVLWHLM
REVQMNRSTSLNRSFDRSLFVVLDSLNSQDGSVSAVGQSWLGRALSLGDVVRILEPVLLQ
LLDPRTQRIAIQSAKHNLLVGNWSALIYRDRTNIKSTGNVMNQSEDSMLTHIATVDREAV
WLDLEHHEMPSDTPVISCSESEETDGDDNEAREDGEEGSEHTESADTSGAQNSTETSSSG
SIPPTEICRWRGIVVNGLKRGDSERTQASDSLSSDEDDGQLEEIAKXRLLKQQLERQEAV
DSLFQNVLLYRQTYESGRILYAFAVVETLLRSSAGPFVEALSNTALDCSSTAHLNLIQNL
LERHRQAQEGGNFYGPLQNSTSPKAGPPTFLLEILTCICLRYLRSHFPSYASVNACHVQA
NREVQVKSVEVLTALVEQLVTVAQQAQTGETGASGSLEAIRNLLWGSKLQHYVLLMLSRS
MYVCQRGDGPVPHSLTKNEQSDDVREISEERLVNCGRDGSWAEHPIQIALLKLLKVLIVL
EHCICPANTKKHTQGDNQFQQPVDNIPPSALAREWHTAVMFQQSIKAVCYVASQPITAQG
MFVSAAAQALCPQYGFAMHPAWVTLLCQILPFIGRSLAIIVAPIIKQICRNLDELVKQHE
HDGFKATHGSNLKKENIAPDYPLTLLEGLTAITHYCLLEHKKSAGCDATDMRNACNAILE
GFPHMVSTMALLWGVVKGADSAYSSRSSSTSVYFKSTKILKQKVLGLLMPLTQHYGSQVM
ASVAAVWNSRQSRKRRSNNKILPVASDSQMMIVDLVKSMNTLRTETVLQLIREVVKKPHQ
IKGDQQRPTLVDVPMLQFCYAYIQSLHAQDLQENVMAILSLLKDSVQLNLVPPGHFLLLG
ILNDFVNRLPTMDNKRDSRELQEVTQRILEAVGAVAGSSLEQTSWLSRNLEVKAQPQICL
QDDEDDPEGSEFYESVGQGSAMVSSSAPSVFSVQALTLLAEILAPLLDMVYRSDEKEKAV
PLISRLMYYVFPYLKNHSAYNMPSFSAGAQLLSSLSGYAYTKRAWKKEVLELFMDPLFFT
MEMSCLCHWKAITDHLLTHEKTMFKDLMSMQSSSLKLFNSAEQKAMLLKRQAFTMFSGEM
DQYHLYLPLIQERLTENLRIGQTLSVSAQMFLMFRVLLLRISPQHLTSLWPIMVTELIRI
FARLEKTLLEDKDVSKNKRGGQEKNCPRPFPQAELDLYLSACKFLDTAVSFPPDRMPLFQ
MYRWAFIPEVDVDSYDGPGTTLLEGEHECKPHVVRILEGLHHRYGELNGTVGESECERME
FPLLTFHSLSSITQLVPFFQTLCSSFCSLSPSPHPPAEYPPSSADRVLQCLELITEEEFL
DGMDS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccctgaggaggcagaactccagaatgactaccgttaccgtagttacgcagcc
gttattgagaaagcgttgcgcaattttgagtcttccagcgagtgggctgacctcatctcg
agtcttggaaaactcaataaggccctccagagtaatctgaagtactctttgttgccgagg
cggctgatcattggaaagagactggctcagtgcctgcacccggctctgcctagcggcgtc
caccttaaagcgctggagacctacgagatcatcttcaaaatcattggcacaaaatggcta
gccagagatctgtttatttacagctcaggactgttccctctgctcagccatgcagcgatg
acggtaaaaatggctgtgctgaccctatatgagcgctacttcttgcccctgcagaaagct
ctgctcccaagtctgcaggccttcatcatgggtttgctgcctggcctggaagaaggcctg
gaggtctatgacaggaccgatgcactgctggtgaagttgtccctgctcgtgggtcagtca
gtgttttatggggctctgtggggcgcagcactcgtgtgtcctctcgtacggctccctgct
tcactcttcatcgtcacacactttgaccgcatggccagcagccgtgaacagaaacacatg
ctggggaatgaccaccggctagctgtgaaggcgacctgtctctctctacaggacactaat
gtattggtccagcggaacatgttagagattcttctcaacttctttcccttcgcagcatgt
ctggacccagtgacgtgctctgtccctcttaaacgagaagagatgatcactgtggtctct
gctgcctctctcactctgctcaggagggacatgtcactcaaccgccgactctatgcatgg
cttctaggattagatattaaagggggaatggtggctccagatacaaccctgtatgctaca
gtggaggaacatactgcacactactttaacacacattccagagagatgctggtgcaggcc
ctagtgaatatcctgcagcagaaagacatagagaaagacccagataatgtcatgaactat
cttagaccgttccgcatcatgataagtttactggacaaaccagagattgggccactggtt
gtgtcagatgtcttgctggaggtgatcaggaccttttatagttactgtcaagagttgctt
ggaatggagttgcttaactccagtcactctggcaaccatctcacaagtaaaatcaaagaa
aacaaacatatttctgagatcataaagacggtcaatatgttggtgggagccatgagcagt
gaatacctctgggactacatgaccaagcgcttcctcacctgtttgagtgggctcagtgac
catacagggttgtcttctgctaaagcctggagtccttctccatcagtgtctgagctctca
aacctcatcatctttctcctcgatgttatccctttggagctttatgctgagatccaaaca
cagtatctgccccagatgctgggtagcatgctgcagtctgtatgtgctcacatggattct
ctcagcctagcagagcttacacaaactcttcgagcatgtttcaaagttctgagtaagatc
cagatgccggtgagctatatggacatgaatgtggagtctcgcacacatgtaaaggaaaca
aatgttgcagtgtctgacatcaagaacaatgagactcataaccacaccagtgatgacaaa
tttaaagaagatgaagtagccatcaatggacaggatgcacaagagactggacctgaagtg
gccatgttcccgtccctgcgctctgaagacagcggcctggggctcagcgcctcaccttct
gagcagcagcttcctcctggccgtgactcctccagccctgcttcaggagtttgcaccaag
gcagaagatgtttggaggaaaggagggagtgtggaaaacatgtccaagtgcattcaagac
atactggtgtctgtaattacaaggcatttgctagtagttgtagatccagaaaagcagaag
aaacaggaggaggcgactcaggccgtgcagggtgcctcgaggcggtccaagacacgctcg
tcatctggtagtgagggaaaccgagatctgggactgatcagagacagactggctgagctt
ttcatccctggaaaactgcgagaacaacaagcgtttactgatgataaggggaaaagttct
ggacatgagctctttcagtggactgagggattccagccaagagggaaaggagagatcagc
gaggcttgtcgaaatgcctttactgctgcttgtcaccttctgctggagagcacaactttc
ccagtctactacaccgaaaaggagagccaagagcttcacagcaacatgtttgagaacacc
acaggcaataaagaaggcagccttcctgagtggctgaggtcgttaatgactctctgttgc
atttcaaaagactaccaggttcagcatgcggcgatttcttctcttctggagttaataaac
cactctcagtctttagcgctggtcatccaggataagaaccagcgctataaaagatcagaa
gccaaccccctcagtggacagctacagatggtcactctgcctcccatctacccagcagtg
cttaaaactatggagctccacacagacttttaccagagggcagctcaggtgctgtggtct
cagctggacaccgaacgcaaagagcaacacatttcctgtgtggagcttttctaccgacta
cactgtctggctccatctacagccatctgtgaggatataatctgcatggctttgctgagc
agagacaaggttgtgtgcctggatgctcttcacagattctctgttttgtggcacctgatg
cgagaggtccagatgaatcgcagcacttctctgaaccgctcgttcgacaggtctctgttt
gttgtgttggatagtctaaatagtcaagatgggagcgtcagtgcagtcgggcagagctgg
ctggggcgagctctttctcttggtgatgttgtccgtattttggagcctgttttactccaa
ttgctggacccgaggacacagaggatagccattcagagcgccaagcataatcttttagtt
ggtaattggagtgcattaatttacagagacaggaccaacattaagagcactggaaatgta
atgaaccagtcagaagacagcatgctgactcacattgccacggtagaccgtgaagctgta
tggcttgatctagagcatcacgaaatgccatccgatacccctgtgatatcttgcagtgaa
agtgaggagactgacggagatgataacgaggccagagaagacggagaggaggggagtgag
cacactgagtccgcagacacaagtggagcacagaactccacagaaacctcgagttcaggc
tccatccctcctacagagatctgccgatggagaggcattgtggtcaatggcctgaagcga
ggggactcggagcgtactcaagcttctgattcactatcaagtgatgaggatgatgggcag
ctggaagagatagccaaantccgtctcttaaagcagcaacttgagagacaggaagcagta
gattcactattccaaaatgtgctgctttaccggcagacatatgagagtggacggattctg
tacgcctttgcagtggtggaaacgctgttgaggagcagtgcaggtccatttgtggaggca
ctaagcaacacagctttggattgcagctccactgcccacctgaacctcattcagaaccta
cttgagagacatcggcaagcccaggagggtggcaatttctatggccctctccagaattcc
acttctcctaaagctggtcctcctactttccttctggagattttgacatgcatctgcttg
cggtaccttcgctcccacttcccttcttacgctagtgtgaatgcctgtcatgtccaagcg
aacagagaggtgcaggttaagagtgtggaggtgctcacagcattggtggaacagctagtg
accgtggcccagcaggcccagacaggtgaaactggtgccagtggaagcttagaagccata
cgtaatcttttatggggcagcaagttgcagcactatgtcctacttatgctctctagatcc
atgtatgtctgccagcgtggagatggacctgtcccacactcactgaccaagaatgaacag
agtgatgatgtcagagaaatctctgaagagaggctggttaactgtgggcgagatggcagc
tgggctgaacacccaattcagattgccctcttgaagctgcttaaggtgcttattgttctt
gaacattgtatatgtccagcaaacactaagaaacatacacaaggagataaccagttccag
cagcccgtggataacatccctccttctgccctagcacgagagtggcacactgcagtaatg
ttccaacagtctatcaaggccgtttgctatgtggccagtcaacctattacagcacagggc
atgttcgtgtcagcagcggcccaggctctgtgcccacaatatggctttgccatgcacccg
gcttgggttacattgctctgtcagatactacctttcattggccggtcactggccatcatt
gtggctcccatcatcaaacagatctgcagaaacctagatgagcttgttaaacagcatgag
catgacggattcaaggctacacatggcagtaaccttaagaaggagaacatcgcaccggat
tatcctcttactctgctggaggggcttactgcaatcacacactactgcctcctggaacac
aagaagtctgcaggttgtgatgcaacggacatgcgaaatgcctgcaatgccattctggag
ggatttcctcatatggtcagcaccatggccttgctttggggtgtagtcaaaggtgctgac
tcggcctacagtagcagatcttcctccacctctgtctatttcaaaagcacaaagatccta
aaacagaaggttctggggctactaatgccactgacgcagcactacgggtcacaagtcatg
gcctcggtggctgctgtatggaacagtaggcagagccggaagagacgctccaataacaag
attctgccagtcgccagtgattcccagatgatgattgtagatttagttaagtccatgaac
acactccgcactgaaaccgttttgcagctcatcagggaggtggtgaagaaaccccaccaa
attaaaggagaccagcaaaggccaaccttagttgatgtacccatgctgcagttctgctat
gcctacatacagagtcttcatgctcaggatcttcaggaaaatgtcatggctatcctttct
ctacttaaagattcagtgcagcttaatcttgtcccacctgggcatttcctccttcttggc
atcttgaatgactttgtgaatcgactgcccaccatggacaacaagagagattccagagaa
ctgcaggaagttacccagagaatcctggaggcggtaggagccgtggctggctcatctctg
gaacagaccagctggctgagccgtaacctggaggtaaaggcacagcctcagatctgcttg
caggacgatgaagatgatcctgaaggaagtgaattctatgagtctgttggccaaggaagt
gctatggtgtcatcctcagctccatctgtgttcagcgtacaagcattgactctgctggcc
gagattctagcccctcttctggatatggtgtatcgcagcgatgagaaggagaaagccgtg
cctctcatctcccgcctcatgtattacgttttcccctacctgaaaaaccacagtgcctat
aacatgcccagtttcagtgcaggggctcagctattgagcagcctaagtggttatgcgtac
actaaacgggcctggaaaaaggaagtgctggagctctttatggatcctctgttctttacc
atggagatgtcctgtctttgccattggaaagccatcacagaccatctgctcacacacgag
aagaccatgttcaaagatttgatgagcatgcagagcagttctttgaagctgtttaacagt
gctgagcagaaggccatgttactaaagcgccaggcattcaccatgttcagcggagagatg
gaccagtaccacctctacctgcctctaattcaagagcgcttgacagaaaacctgcggata
ggacagaccctgagtgtgtcggctcagatgttcctgatgttccgtgttctgttgttgaga
atctcgccacagcacctcacctccctctggcctataatggtcacagaactgattcggatt
tttgcacggctcgaaaagactctgctagaggacaaggatgtttcaaagaataagcgaggt
ggtcaggagaagaactgcccgagaccttttccacaagcagaactggacctgtatctttca
gcctgcaagttcttggacactgctgtgtctttcccccctgatcggatgcctcttttccaa
atgtatcgctgggcattcatacctgaagtagatgtagacagctatgatggtccaggcacc
actctgctggagggtgaacatgagtgtaagcctcacgtggtcaggatactggaaggcctt
catcatcgctatggggagctgaacggaacggtgggagagtcagaatgtgagcgtatggag
ttccctctgctcactttccactcgctctcgtccatcacgcagctcgtgccgttcttccaa
accctgtgtagctctttctgcagcttatcaccctctcctcatcctcccgctgaatacccg
ccctccagtgcagacagagtgctgcagtgtttggagctcatcacagaggaagagtttctg
gatggtatggattcataa
DBGET
integrated database retrieval system
