Silurus meridionalis (southern catfish): 124382874
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Entry
124382874 CDS
T08004
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124382874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124382874
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124382874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Rho_Binding
Motif
Other DBs
NCBI-GeneID:
124382874
NCBI-ProteinID:
XP_046701140
LinkDB
All DBs
Position
3:26365622..26387950
Genome browser
AA seq
1691 aa
AA seq
DB search
MEKEPEVECGTSASCSGKSKLDTLSKDDLIKFAKKQMAAMQKLKSKCAELEEKTVKAHQA
GASNESVIQELTERLDAVLLEKAETQQMLLVLRKENQNLRNQREESENTVAVLQEKLNDS
EKGHAEKIKLMEEQFEKSHTKYREELEVLKKMAGENEEIQRLRLQEDFNSKNTAVRQEYE
SKIIDLEQNLELAKKEWLTEKESLKEAHQTALQKTQEEIDNFKEMISGLNIQHEEEVRYL
EDQLEINAAQFDMERERLLLIQEELSEQIALKEGYLQDVQEEEEDLTRRSQKPLDLINAS
ESPLLEDPETEVDKLRLALEDLRTQNALLKEEFTFLTNVNTKLDCDLKHLKEEFSMEKEE
LEFKINELQMTKEEGEICPEKEVNIINAEETVTLEEHNQILQKLKELHKTELTELEACLV
SHHEHEKEAIVREARDLQNACKVLSEEKQSIVSEYEHTKEILSNIEKELGDRTSDFVKKY
NAMKEQAAVSVQMLEEKLQEKDGLIEKLKSLEQTQDRSEQKMCCKEDIVPEDKKISGNKA
SLEEMFMYIKQIQNECKQGGKDTAQITIEKFEDLLINLEGALDEKKRLQTCIAELESRLS
FSAREKDQLSRHCNLSVEDLAVSNEKMAELQKEHQSALQEQDTLRNNLKNTNENLLKARK
QVCYVLQQNYSEEMEEEQDISVLLNHLLSRVEEDKSTCIVSNEEKDKLQKDLQALFDEKN
HLKTVLETSERKHIETQRHVCEMLEQNYSVKIDGEVDISVLLNHLQSNIHKDQKSNIMLN
EEKLDQQRDLVNMVEARDDLKERLETHERKLSDVQKNICEMLEQNYSVNVDEDEDISVLL
KQLLLSVQEEKLMLTQQLHEKTVQLSELRDGGLLPKTSLNEEQSDAEHLQRDQNEQAEIT
GRLVGQDHEESAVEGGAQETDDMKRLQQKLSEKESMLVHLKEEISHLQESKLSTLNENMK
RIEFLEKESKEKDERLNKFKAVAVKARKELDSSKKEASRLKEDLEALKSERDKMSDSMKA
IIHGAEAYKNLMIDYDKQTELLDKAKEKLEASEKLAGDLTKRLHVTVEQHKQLSSEREDL
MAHIETLQNNVRQLEAQALDMHKLKSSVDRDLEAERRLKEQKIKEHACAVKEVEELNALL
QKQKQQLQQTVQELEQLRKDAQQNSLMDMEMADYERLVKELNLQLSDKDRLLEEQERQTQ
AQREREEKLEKEIESLKSLVDSGEEKTAKVKQLLVKTKKDLAEAKKEEAAQLILQSSLKG
ELEAIQQQLENHKIQCSELTADRHKLQEQLKSISDQHQKSVTSYQHQVTNLQNDLSSATV
ELESTKSEFESYKVRVHNVLKQQKHKSSSQSDGDFSKQDRENVEAMLEQLRSKLKESQLN
AQSSNSELQQLQTEYDTLLERHNKMLQQTINKEAELRERLLSLHSENVALKSEHSQTVAQ
LTAQTETLRSSLRDQLHHLQDEHRSTVETLQHQINSLETQLFQLQKEPAASAAQPQSKKP
QIDKRLLDLPLFEMNMAREEGEGMETTETESIANAGTPPPSLEQLLTSPDPKHEPFVWQV
EPTKEELTNKLNTASRSMEHMNRLLHESEATNAILMEQINLLKSEMRRLERNQEREKSVA
NLEYLKNVLLQFIFLHAGSEKQALLPVIHTMLQLSPEEKSKLSAIAHGEEEAAASRGSGW
TSYLHSWSGIR
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaccggaagtggagtgtggcacttccgcctcatgtagtggaaaatctaag
ctggacacactgtccaaagatgacctcattaaatttgcaaaaaagcagatggctgcaatg
cagaagttaaagtcaaagtgtgcagaattagaagagaaaacagtgaaagcccatcaagct
ggagcatctaatgaatctgtgatacaggagctgactgagagactggatgctgtattgctt
gagaaagcagagactcaacagatgcttttggtactacgcaaagaaaaccaaaatctgaga
aaccaaagagaagagtcagaaaacacagtagctgttctccaggagaaactgaacgattct
gaaaaaggccatgccgaaaagataaaacttatggaagaacagttcgaaaaatcacacaca
aagtatcgagaggaactggaggttttaaaaaaaatggcaggtgaaaatgaagaaatccag
agacttcgacttcaggaggactttaattctaaaaatacagcagttcgtcaagaatatgag
agcaaaataattgacttggagcaaaatctggaattggctaaaaaagaatggctaactgag
aaggaaagtcttaaggaagctcaccagactgctctacaaaaaacccaagaggagattgac
aactttaaggagatgatttcaggactcaacatacagcatgaagaggaggtcagatatctg
gaagatcagcttgaaatcaatgctgcacagtttgatatggagagagagaggctgttgctg
atccaggaagagctctcagagcaaatagctcttaaagaaggctaccttcaggatgttcaa
gaggaagaagaagacctcaccaggaggagccaaaagccattagatttgattaatgcatcg
gagtccccattattagaagacccagagactgaagtggacaagttgagattagcactagag
gatttgcggacacaaaacgcactgcttaaagaggagttcacctttctcactaatgtgaat
actaagcttgactgcgatttgaaacatttaaaggaggagttcagcatggaaaaagaagaa
ctggagtttaagatcaatgaattacaaatgactaaagaggaaggtgagatttgccctgaa
aaggaggtcaatattataaatgcagaagagactgtaactctggaggaacacaatcagatt
cttcaaaaattaaaagagttgcataaaacagaattgacagaactagaagcttgtcttgtt
tctcatcacgaacatgaaaaagaggcaatcgttcgagaagcacgagatctgcaaaacgca
tgtaaggtgctttctgaggagaaacaatctatcgtcagtgaatatgagcacaccaaagaa
attctgagtaacattgagaaggagcttggtgaccgaacatctgactttgtgaagaaatac
aatgccatgaaggagcaggctgcagtctcggttcagatgttggaggaaaagctgcaggag
aaagatggcctaatagagaaattaaagagtttagaacaaacacaggatcgttcagagcaa
aaaatgtgttgcaaggaggacatcgttccagaggacaaaaaaatcagcgggaacaaggcg
tcactggaagaaatgttcatgtacataaaacaaatccagaatgaatgtaagcagggcggt
aaggacactgcacaaatcacaattgagaagtttgaggacttattaataaacttggaagga
gctttagatgagaagaaaagactgcagacttgtatagctgagctggagagccgtctctct
ttctcagctcgtgaaaaagatcaactgtccaggcattgcaatctttcagtagaagacctg
gctgtgtccaatgagaaaatggctgaactacaaaaagagcaccagtctgcattgcaagag
caggacactttaaggaacaatttgaagaacactaatgaaaatcttttgaaggcacggaag
caagtttgttacgtccttcagcagaattactctgaggaaatggaagaggagcaagacatc
tctgtattgctgaaccatcttctatccagagtggaagaagataaatcaacctgtattgta
tcaaatgaggaaaaggataaactacagaaagacctgcaagctttgtttgatgagaaaaat
catttaaagactgttcttgaaactagtgaaagaaaacatattgaaacccaaaggcatgtc
tgtgaaatgctggagcaaaactactctgtgaaaatagatggagaggtggacatttctgtg
cttctgaaccatcttcagtctaacattcacaaagaccaaaagagcaacattatgttaaat
gaggaaaagttggatcaacaaagagacctggtgaacatggttgaagcaagggatgatcta
aaggagcgtttagaaacccatgaaagaaaactttctgatgtacagaagaacatctgtgaa
atgctggagcaaaactactctgtgaacgtagatgaggacgaggacatctctgtattgctg
aagcaactcctgttaagtgttcaagaagagaaactgatgttaacacagcagttgcatgaa
aaaacagtgcagttgtctgagctcagggatggagggctcttaccgaagacgagcctaaac
gaagaacagtcagatgctgaacatttgcagcgagaccaaaatgagcaggctgaaataaca
gggaggttggtgggccaagaccatgaagaatctgcagttgaaggtggtgctcaggaaact
gatgacatgaaacgtctccaacagaagctaagtgaaaaagaatccatgttagtccatcta
aaggaagaaatttcccatttacaggaatccaagctatctacacttaatgaaaatatgaag
cgaatagaatttttggaaaaagaaagcaaagagaaagacgaacgtttgaataaattcaaa
gctgtagcggtgaaagcgaggaaggaactggacagcagcaaaaaagaggcatctagactg
aaagaagacttggaggctttaaaatctgaaagagacaaaatgtcagactccatgaaggct
atcatccatggtgcagaggcctataagaatcttatgattgattatgacaagcaaactgag
ctgttggataaagcgaaagagaaactggaagcatcagaaaaactggctggtgatttaacc
aaacgtcttcatgtcactgtagaacagcataagcaactttcctctgagagagaagaccta
atggctcatatcgagactctccaaaataatgttcgacagctggaggcacaggctcttgat
atgcacaaactcaaatcctcggtggacagagacttggaagcagaaaggcgtttgaaagag
caaaaaataaaggaacatgcctgtgctgtaaaggaagttgaggagctcaacgctttgcta
cagaaacagaaacagcagttgcaacagacagtgcaagaactcgagcagcttagaaaggat
gcccagcaaaactctttgatggatatggagatggcagattatgagcgtctggtcaaagag
ctcaacctgcaactttctgacaaggacagacttctagaagagcaggaaagacaaacacaa
gctcagagagagagggaggagaaacttgagaaggaaatagagtctttaaagtcacttgtg
gacagcggagaagagaagactgcaaaggttaagcagctgctggtgaaaactaagaaggat
ttagcagaggccaagaaggaagaagcagctcaactgatcctgcagtcttctctgaaaggg
gaattagaggccattcaacagcaattggagaaccacaagattcagtgtagtgaactaact
gcagaccggcacaagctccaggagcagctaaagtcaataagtgatcagcatcagaagtcg
gtcacttcctaccagcaccaagtgaccaatttgcagaatgatctgagctctgcaacggtt
gaacttgagtccacaaagtccgagtttgagagttacaaggtgcgagttcacaatgtgctc
aaacagcaaaaacataagagttcatctcaaagtgatggggatttttccaaacaggacagg
gagaacgttgaggcaatgctagagcagctgaggtccaaactgaaagaaagtcaacttaac
gcacagagtagtaattcagagctgcagcagcttcagactgaatatgacacacttttggag
cgtcacaacaaaatgttgcagcagaccatcaataaagaggctgaactccgagagaggtta
ctgtcgctgcattcagagaatgtagcactaaaatcagagcacagccagacagtggcgcag
ctaacagcacaaactgaaacattacgtagtagtttgcgcgaccagttgcaccacttgcag
gatgaacatcgcagcacagtagagaccctgcaacaccagatcaacagtctggagacccag
ctgttccagctgcaaaaagaacctgctgcatcagctgcacaaccacaaagcaagaagcct
caaatagacaagaggcttttggatctgcctttgtttgagatgaacatggcacgagaggaa
ggagaaggaatggagacaacagaaacagagtctatcgccaatgcagggactcctccaccc
agtctcgagcagctcctcacttcacctgaccccaaacatgagccctttgtgtggcaggtg
gagcccacgaaggaggagttaactaacaaactgaatacagcctcccggagcatggagcac
atgaacagactgctacacgagagtgaagccaccaacgccatcctcatggagcagatcaat
ctcttgaagagtgagatgcgccgtctagagcggaatcaggagcgagaaaaatcggtggca
aacctggagtatctgaaaaacgtgttgctgcagtttatctttcttcatgctggaagtgag
aagcaggccctgctccctgtcatacacacaatgctgcaactcagcccagaagagaagagc
aaactgtccgcaatagcacatggtgaagaagaggctgcagcatctagaggatctgggtgg
acctcatatctccacagttggtctgggatcagataa
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integrated database retrieval system
