Silurus meridionalis (southern catfish): 124382882
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Entry
124382882 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124382882
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124382882
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124382882
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124382882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
124382882
NCBI-ProteinID:
XP_046701162
LinkDB
All DBs
Position
3:complement(26972915..27001491)
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AA seq
968 aa
AA seq
DB search
MAPVQQELEINLAQRLASNEKSIRSKALKTLRKYINLRSQKIEGGFTAEDLLKIWKGLFY
CLWMQDKPLMQEEISHTISGLIHRFHTTDNQLLYFATFLQTVKREWNGIDRLRMDKFFQL
VRFMFRQVFEILKRREWEFSVVNQFLQIFTKQLLQNTEHVPKGLMLHILDLYMNELAQVG
SAELTAEQNLTFIDPFCKTMAKTKDRLLLTFISKNIFRTIVDHAPYAIEDLMRELQHAGG
DDSDSDQASSEVEEEEIVKKGELKNMAPKETKVKKVNGTPEVVEDSKGSKGDLDLDSMDT
EENDVGPVLQFDYGALADHLFELGSRSNTQSRNRTTMYSLVKTFRDLSAGIFPQIKDNCD
LSDRSDEELFDDKKSEKKKRRNESPRTGDEMVAKKSKAACQDKEKPCALLSQPTKNLKKT
KKGFEENKEFTDTDKAMDTSHIPLETGGTPREQDLRKKGVVDGQLKFSEIADHETVSQCM
ESDSQHHLEAGISLKKRRRSKVLKKISKNLREGTHEFHLNLKESEGEPHTDVCEEAVMKQ
TSFKPMSGIRCTETSTDINGLGQSYANHKPEMTSHLAGSVETQQAKCGIFLTQEKTKNKK
KKMMSVVEKMNPEISGLILENTSEEISLQSQLETSAVAFYKEHNAREKFRKQYTPQKVDK
DDNAAQTQLGTSASQKKVKRKKLKSSSEEEAIRSILEDTNQHNNDEISRHSYPTSEEDCA
TQSRLMARATKKKKGKGKQTFSNQEISKLKTSQPQHGKKIKLKQQESQPVEETKENPIFE
NAANENAESVVPDHSTEMNSVTPMKNGKKKRKLQTDEAVMSQNNEHVGNEMGGKKYKIRG
IVTHKKLKMGKASPKSDFVSFQGLIKPPTPLFCKTKPKHSTPLTSIKKFQTLKTENKKVT
FGLKNNKTTEFKKTDRSLLVSPVGSSRVAFDPKKMPMSGVLKSTSLSPVLTVKNKPAAKK
RATAADFF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtacagcaggaactagagattaacctcgctcaaagactagcatcaaacgaa
aagtctattaggtctaaagccttaaagacgctcaggaagtatattaatctccgatcacaa
aaaatcgaaggtggttttacggctgaagatttgctgaagatatggaaaggacttttttac
tgcctgtggatgcaggacaagcctcttatgcaggaggaaatttcacacacaatctctggc
ctgattcatagattccacactacagacaaccagctactctattttgcaacgtttcttcag
actgtaaagagagaatggaatggcattgacagacttcgcatggacaaatttttccagctg
gttcgcttcatgttccgacaagtgttcgagattcttaagagaagggaatgggagttcagt
gtggtaaatcagtttttacagattttcacaaagcagcttttgcagaacactgaacatgta
ccaaaaggactgatgctgcacattctggacctttacatgaatgagttggctcaggtcggc
tccgctgagctgacagctgaacagaacctgactttcatcgacccattttgcaaaaccatg
gccaagaccaaagatcgcttgctgttgaccttcatctctaagaacatctttaggactatt
gtggatcatgctccttatgcaattgaagacctgatgagggagctgcagcatgcaggaggc
gatgattcagactctgatcaggcgtctagtgaggtggaggaagaagaaatagtaaagaaa
ggggagctgaagaacatggcacccaaagagactaaagttaaaaaggttaacggaacccct
gaagtagtggaagacagcaaaggaagtaaaggtgacctggatttggacagcatggacaca
gaagaaaatgatgttggtcctgttctacagtttgactatggtgcattagctgatcatctt
tttgaattgggaagccgctcgaatacacagagcaggaaccgcacaacaatgtatagcttg
gtgaagacttttcgtgatttaagtgcaggaattttccctcaaataaaggataattgtgac
ctgagtgatagatcagatgaggagttatttgatgataaaaaaagcgaaaagaagaaaaga
agaaatgagagccccagaactggagatgaaatggtggctaagaagagcaaagcagcttgc
caagataaagagaagccatgtgcattgttaagccaacccacaaagaacttaaagaaaaca
aagaaaggttttgaagagaataaagaatttactgatacagacaaagccatggacacatca
catattccactggagacaggtggaactccaagagagcaagatttgagaaagaaaggcgtg
gttgacggccagctgaagttctcggaaatagctgatcatgaaacagtgtcccagtgtatg
gaatcagactcgcaacaccacctggaggctggtatcagtttaaaaaagaggaggagaagt
aaagtcttaaaaaaaatctcaaagaatctgcgagaaggaacacatgaattccatcttaat
ttaaaggaatctgagggagaaccacatactgatgtttgtgaagaagctgtgatgaagcag
acaagtttcaaaccaatgtcaggcattaggtgcactgaaactagcacagatataaatgga
ttaggccagagctatgcaaatcataagcctgaaatgacatcacatttagcaggttctgtg
gaaactcaacaggctaaatgtggtatttttcttactcaggagaaaactaagaataaaaag
aaaaagatgatgagtgtggtagagaaaatgaacccagaaatcagtggattaattctggaa
aatacatcagaagagatttctctccagagccagttggagacttcagcagtagcattttat
aaagaacacaatgctagagagaagttcagaaagcagtacacaccacagaaagtggacaag
gatgacaatgcagcacaaactcaactagggacaagtgcctctcaaaaaaaggtgaaaagg
aaaaaactgaaatccagctcggaggaggaagcaattagatctattttagaagacaccaat
caacacaacaatgacgagatcagcagacattcctatcctacatctgaggaagattgcgca
acacagtctagactgatggcacgtgctaccaagaaaaaaaagggaaagggcaaacagacc
ttttcaaatcaggagatctcaaagctgaaaaccagtcagccacaacatggaaaaaaaata
aaattgaagcaacaagaaagtcagcctgtagaagaaacaaaagaaaaccccatttttgaa
aatgctgcaaacgagaatgcagaatcagttgtaccagatcactctactgaaatgaactcc
gttaccccaatgaaaaatggaaaaaagaaaagaaagctacagacagatgaggcagtaatg
tctcaaaataatgaacatgtaggaaacgagatgggtggaaagaaatataaaatcaggggc
attgtaacccacaagaagctgaagatgggaaaagcctctccaaaatctgactttgtctca
tttcagggtctaataaaacccccaactccacttttctgtaaaaccaaaccaaagcacagc
acacctctgaccagcatcaagaaattccaaacattgaagactgaaaataagaaagtgacc
tttgggctcaagaacaataaaaccactgaatttaagaagactgacaggagcttgttggta
agtcctgttgggtcatctcgtgtggccttcgaccctaagaagatgcctatgtcaggggtt
ctgaagtcaacttcactgtctccagtactgactgtgaaaaataaacctgcagctaagaaa
agagcaacagcagcagatttcttttaa
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