Silurus meridionalis (southern catfish): 124382897
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Entry
124382897 CDS
T08004
Symbol
pgap1
Name
(RefSeq) GPI inositol-deacylase
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
smeo01100
Metabolic pathways
Module
smeo_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
124382897 (pgap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124382897 (pgap1)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
124382897 (pgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
Abhydrolase_6
PGAP1_2nd
Hydrolase_4
Abhydrolase_1
DUF676
Palm_thioest
Lipase_3
Motif
Other DBs
NCBI-GeneID:
124382897
NCBI-ProteinID:
XP_046701185
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All DBs
Position
3:28415555..28435105
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AA seq
940 aa
AA seq
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MKALIYGFYAAALGLLLTGLRELLFGFEENRCSMTYMFEYPEYRRVQLPRRVARQYPAYG
LYLYGEGVYAQETRNLKLSGAPVLFLPGNAGSYKQARSLGSVALRKAEGLDGGIHLNVFT
VDFNEELVALYGGSLIRQTRFLHESIKVILQLYKDHPDPPSGVVLVGHSMGGVIARALFA
LPRFNPRLVILILTQASPHLAPVLSLDPFILDFYSSVRRRWIARAEDLRNVTVLSMGGGY
RDYQVRSGLTSLTCPEDDPNKMAVVVTAVPRTWVSTDHLSIVWCKELVLATVRAFFDLID
PETGQFTNDTEKMTSILNHHFIRHPGRLPNEQVNTPVSFSGSLEDWSEVNTLRLFYSAPK
DTRVQYFLFALSSRRKAYTHFYCRNSKLEMSSWIFGCTLMNGSMCVQAVDLSFSTELLPA
YKVLTVKLSELLTVSHLVIDASNTNARQFILECKWQRDESLTIALPVPHVLSFGLTVSEV
TINSSRLLHTLQLQHFHQVYQAFIISVSSQCKTPKERLPSVFRLKVPWFREDSFVTAGIP
SVTEISGMLHTSRQDNTSSALLELHTAPNCQYKISVRSSFPKVLGQILRFCGPAMPVYVA
VALLLALKGQLHSVLRTGRPANVRDAVAKSVQLHKLEPPVLLLHLFLRQGWFQESWSALG
LPAVDYLPLTPFGDLSHDVVGPGHDWPRLVSPLLCILGAAVAFWGSAVLSKSLRVLSFLL
APLHRPSVSRHCGTLRLPAQILLILGLTTLGGVTCGALSVTAVFLLHLYRVLRLQMTERS
LRHMLNLAPQSMQQNSENGCRANESQRRHNDCNGTLLLSESALQEVRDDLQLHLTVSALL
TLPVMLGAPSLIYWSRNFRFSAHLDPDPFWPHTLPLLISSVLVVNCNTLTLYHSKLIRQA
TVCVLLPLSVAMLTFSTLHLYRVTYFLSAALTLLAASCYL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctgatctacggcttctacgcggcggctctcgggctgctcctgaccggcttg
cgggagctgctgttcggcttcgaggagaaccggtgcagcatgacctacatgttcgagtat
ccggagtaccggcgtgtccagctcccacggcgtgtggcacgtcagtaccccgcctatgga
ctctacctgtacggcgaaggcgtgtacgctcaagaaacacggaatctcaaactcagcggt
gctcctgtactcttcttacctggaaacgctggcagctacaagcaagctcgatctctgggc
tcggtggcgttgagaaaagccgaggggttggacggagggatccacctcaacgtcttcacc
gtcgattttaacgaggagctggtggccctgtacggtggaagcctgatccggcaaacccgc
ttcctccatgagagcatcaaggtcatcctgcaactttacaaggaccacccggatcctccg
agcggtgtcgtgttggtgggccactctatgggcggtgtgatcgcgagagctcttttcgcc
ctccctcgcttcaaccctcgcctggtcatcctcatcctcacccaggcctcgcctcacctg
gcccctgttctctccttggatcccttcatactcgatttctattcgtccgtgcgacggcgc
tggatcgcccgagctgaggatttacgcaacgtgacggtcctgtctatgggtggcggatat
cgggactatcaggtccgctccggcttgacctccttgacctgccctgaggatgacccgaac
aagatggccgttgtggtgactgccgttcccaggacatgggtgtctacggatcacctgtcc
atcgtgtggtgtaaggaactggtgctggctaccgttcgagcgttctttgacctcatcgac
cctgaaactgggcagttcacaaacgataccgaaaagatgacgtctatactgaatcatcac
ttcattcgccacccgggacgacttcctaacgagcaagtcaacacaccagtcagcttctca
ggcagcctggaggactggagtgaagtgaacacactccgtctattctacagcgcccccaag
gacacccgggttcagtacttcctgtttgcgctttccagccggaggaaagcctacacccat
ttctactgccgcaacagcaaactggaaatgtccagctggatcttcggctgcaccctgatg
aacggctctatgtgtgtgcaagccgtggatttgtccttcagtacagaacttcttccagct
tataaggtcctaactgtgaaactaagtgagctgttgacggtctctcatctggtcatcgat
gcctcaaacaccaatgcacgacagtttatattggagtgcaagtggcaaagagatgaaagc
ctgaccatcgctcttcctgtccctcatgttctttcttttggattgacagtaagtgaggtc
actatcaactcatccaggctactacacacacttcaactgcagcactttcaccaggtttat
caggcctttataatcagcgtgagcagccaatgcaagaccccgaaagaaagactgccaagt
gtcttcagattgaaggtgccatggtttcgagaagattccttcgtcacggcaggcattcct
tcggtcacagagatcagtggcatgctgcatacaagccgccaagacaatacctcaagtgcc
ctcttagagctccacactgcccccaactgccagtacaagatctcagtgcgcagctccttc
cctaaagtgcttggacagatcctgcgtttctgcggacccgcaatgccggtgtacgttgct
gtggcgctgttgctcgctttgaagggtcagctgcattctgtactgcgaacgggacgaccc
gcgaacgtgagagacgctgtagcgaaaagtgtgcagctacataaactagagcctcctgtc
ttgctgctgcacctgttcctcagacagggctggttccaggaaagctggtctgccctaggg
ctccctgcagtagactacttgcctctaaccccgttcggagacctttcacatgatgtagtg
gggcctgggcatgactggccccgccttgtttcacctctgctgtgcattctgggtgctgcc
gtggcattttggggaagtgctgtccttagcaagtctttacgtgtcctgtctttcctcttg
gctccactgcacagaccttcagtctctcgccactgtggtacacttcgacttcccgctcag
atcctcctcatcctcggtctgaccacgctgggcggagtcacctgcggagccctgtcagtc
accgccgtttttttgctccacctctaccgggtcctccgattacagatgaccgaaaggtct
ttgcgccacatgctgaacctagcaccccaaagcatgcagcagaactctgaaaacggttgc
agggcaaatgaaagccagaggaggcataacgattgtaatggcaccttactgctctcagag
tccgcactgcaagaggtccgagacgacctgcagcttcacctgaccgtgtctgcgttgctg
acgctaccggtgatgctcggcgcaccctcgctcatctactggagtcggaacttcaggttt
tcagctcatctcgatccagacccattctggccccacactttgcctctgctcatctcctct
gtgttagttgtgaattgcaatacgctcactctttaccacagtaagctgatccggcaggcc
accgtatgcgtcctgctccctctcagtgttgccatgttgaccttttccacccttcatctc
tatcgggtcacttacttcctgtccgctgctctgacgctgctggcggcttcctgctacctt
tga
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