Silurus meridionalis (southern catfish): 124382925
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Entry
124382925 CDS
T08004
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124382925 (ttll4)
04812 Cytoskeleton proteins [BR:
smeo04812
]
124382925 (ttll4)
Enzymes [BR:
smeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
124382925 (ttll4)
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124382925 (ttll4)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
124382925 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
124382925
NCBI-ProteinID:
XP_046701225
LinkDB
All DBs
Position
3:complement(21431371..21446676)
Genome browser
AA seq
1108 aa
AA seq
DB search
MASIGDEDLRNGASKPALVVQARSAIVRSSNNHASFAHVERKQHHSLALVNPVPRPNVKV
VHERPHHFSGISSQRASPSVPAGIVHTQSTGALSSSSSCRDTRAHSAISKSSVHIGDPTA
VCQSSCHLEPVIHGYQSHRHLNPLRLRSRLLGKRAFTPPLSIYSHCPSPPKTSLHKASVI
VEKSMPVNQSYPWSRSKLRSNSIGVYRSSTAKLSTVARIETKELKKSCDLIYGKSESKKD
IKKHSQRTVPLEDKYTDVPPNHILDLSEYDTIVAVDSKENEHIVECCVAHGDSEAPRRVR
KVSSEVEFTAAVRKLTKNMGSGSPNGLSGPATANFNSQCKNREVKAGANSAIQVSAVCLI
NGSEEFHMDTHPSSTRCLDENSPCVQMTQDSICAIPDNIDHRTDSNQSPTVYSVMNKISA
IQITKDCCWQTSEEDSSQCSMTVDEERLPDTRGQVNVLRDGEQKELPEELQNVCSSSNDD
GSESDTSSAPSVVSSSNVESMSCELEVDQVVKPALVPSLFPFRPPTLYFSAANEQVELLP
LEQRSLLKWKLSSVTPNVVKNTITRSHFKITKNSHDWLGCWGHHMKSPGFKAIREYQKLN
HFPGTFQIGRKDRLWRNLSKMQKRFGKQEFGFFPRSFVLPQDMKPLRKAWEDGGSRQKWI
IKPPASARGMGIQVIHKWSQMPHKRPLLVQKYLHKPYLISGNKFDLRIYVYVTSYDPLRV
YIFNDGLVRFASCKYSSSMKSLSNKFMHLTNYSVNKKNSEYQTNSDDKACQGHKWALKAL
WHYLESKGINTTLIWDTIKDMVIKTIIASDSYVNTLLKMNLRSAYSCHELFGFDIMLDES
LKPWVLEVNISPSLHSNSALDLSIKGQMIQDVLNLAGFVLPKKEEIILSSSSSCSSTSSL
NEGAWEKSRSDLTTDEKMKRAFYLTQNFGDQDFCSTILEVLTPDDVNVLAESEDELSRLG
DFERIFPSPTTSSYLRFFEQPRYLNLLLNQWEQKYSQNRSKGIILLKSLCQKRVHLGNLA
DSTHNWSSKSKRRHCADRQSTSLAKTVFTKSCARLSRCVRSQLDEDDEWTDHDVQAVTAS
VPDMSGGISDPKLTCGQQQTASPGLPVR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattggagatgaggacttgcgaaacggggcatcaaagccagcccttgttgtc
caagcaagatctgccattgtgcgttcgtccaacaatcatgcatctttcgctcacgttgaa
aggaaacagcatcattctttagccttggttaaccccgtacctcgtcctaatgtgaaagtg
gtacatgagcggcctcatcacttctcagggatttcctcacagcgcgcctctccgtcagtg
cctgcagggattgtacacacccaaagcacaggtgccctttcttctagcagcagttgtagg
gatacaagagcgcacagtgccatttcgaagagctcagttcatatcggtgatcccactgct
gtgtgtcagagcagttgccatttagagccagttattcacggatatcagtcacacaggcac
ctaaacccgctcaggttaaggtcaagacttttaggaaaaagagcttttacacccccgctc
tcaatttattctcattgtccttccccacccaagacatctttgcacaaagcatctgtgata
gttgaaaaaagcatgcctgtgaatcagtcatacccatggtcaaggagcaagcttagaagc
aacagcattggggtttaccgctcctccactgccaagctgtctacagttgccaggatagag
acaaaagagttaaagaagtcttgcgatttgatttatggcaagagcgaaagcaaaaaagac
ataaagaaacacagccaaagaacagtgcctttagaggataaatacacagatgtgcctcca
aaccatattttagacttgtccgagtatgacacgattgttgctgtggattcaaaagagaat
gagcatatagtggaatgctgcgtggcacatggagacagtgaagcacctcggagagtgagg
aaagtcagctctgaggtcgagttcacagcagctgtacgaaagctcactaaaaacatgggc
agtggatcaccaaatggtctgagtgggccagcaacagccaacttcaattctcagtgcaaa
aacagagaagtaaaggcaggtgccaattctgcaatacaagtttctgcagtctgccttatt
aatgggagtgaagagtttcacatggacacgcatccttccagtacccgttgcctagatgaa
aattctccctgtgttcagatgactcaggacagtatatgtgccattccagataacattgat
cacagaacggactctaatcagtctcctacagtttactcagtaatgaacaagatctctgcc
atacaaattacaaaagactgctgttggcaaacctcagaagaggactcaagccaatgttct
atgaccgtggatgaggagaggctccctgataccaggggtcaggtcaacgtgttacgagat
ggtgaacagaaggagcttccagaggagttacagaatgtttgcagtagcagtaacgatgat
ggatcagaatctgatacctcttcagcaccctctgttgtgtcgtcatccaatgttgagtcc
atgagttgtgaattggaggttgatcaggtggtgaagccagcactagtgcccagcctgttt
ccttttagaccccctacattatactttagtgccgccaatgaacaagtggagctgcttcct
ctggagcagaggagtcttctgaaatggaaactaagttctgtcacccctaatgtagtcaag
aacacaatcacaagatctcattttaaaatcaccaagaacagtcatgactggctgggctgc
tggggccatcatatgaaatcacctgggttcaaggctattcgagaataccagaagctgaat
cattttccagggacctttcagatcggacggaaagaccgtctgtggcggaacctgtccaag
atgcagaagcggtttggcaagcaagagtttggcttcttcccacgttcctttgtgctcccg
caggacatgaaaccgctgaggaaggcctgggaggatggaggaagccggcaaaaatggatc
atcaaaccgcctgcttcagcccgaggaatgggtattcaggttattcacaagtggagtcaa
atgccacacaagagaccactccttgtgcagaaataccttcacaagccctacctcattagt
gggaataaatttgatctgcgtatctatgtgtatgtgacttcttatgacccactccgtgtt
tacatcttcaacgatggactcgtccgctttgcaagctgcaaatattcctcttcaatgaaa
agccttagcaacaagttcatgcacttgacaaactacagtgtgaacaagaagaactcagaa
tatcagaccaacagtgatgacaaagcctgccagggccataaatgggcactgaaggcgctc
tggcattatctggagtcaaaaggaataaatactactcttatctgggacacgattaaggac
atggtcattaaaactatcattgcgtcagattcatatgtaaacaccttgctgaagatgaat
ttgcgttccgcgtacagctgccatgagctgtttggatttgatatcatgctggatgagagc
ctgaaaccatgggttcttgaagtcaacatctctcccagcttgcactccaacagcgcacta
gacttgagcattaagggccagatgatccaagatgtgctgaacctagctggttttgtgctc
cctaagaaagaagagattattctctccagcagtagtagctgcagctccaccagcagtttg
aacgaaggagcatgggagaaatctagatctgacttgactactgatgagaaaatgaaacga
gctttttatctcacccagaactttggtgaccaggatttctgctccacgattctggaagtg
ttaacccctgatgatgtgaacgttctggctgagagcgaggatgagctgagtcgccttgga
gactttgaacgcatcttcccttctcctactacctccagctacctccgtttcttcgagcag
cctcgctacctcaacctccttcttaatcaatgggaacagaaatacagtcaaaaccggagc
aaaggtatcatactgctgaaaagtctttgtcagaaaagggtacacttagggaatcttgct
gactctacacataattggtcatcaaaatccaaacgtagacactgtgcagaccgccagagc
acctcacttgccaagacagtgtttacaaaatcatgtgcacgtttgagtcgttgtgtaaga
tcccagctggatgaagatgatgagtggactgaccatgatgtacaggcagtgaccgccagt
gttccagacatgtctggtgggatcagtgaccccaaattgacatgtggccaacagcagact
gcctcaccaggactacctgtgagataa
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