Silurus meridionalis (southern catfish): 124383048
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Entry
124383048 CDS
T08004
Symbol
cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00220
Arginine biosynthesis
smeo00250
Alanine, aspartate and glutamate metabolism
smeo00910
Nitrogen metabolism
smeo01100
Metabolic pathways
smeo01200
Carbon metabolism
smeo01230
Biosynthesis of amino acids
Module
smeo_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
124383048 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
124383048 (cps1)
00220 Arginine biosynthesis
124383048 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124383048 (cps1)
Enzymes [BR:
smeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
124383048 (cps1)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
124383048 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_sm_chain
GATase
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
Motif
Other DBs
NCBI-GeneID:
124383048
NCBI-ProteinID:
XP_046701370
LinkDB
All DBs
Position
3:complement(4563491..4649136)
Genome browser
AA seq
1488 aa
AA seq
DB search
MSNMLTVGRFIRNFASVGWRSAARSLCVKAQTAHLVLEDGTVMKGYSFGNGQSASGELVF
NTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNMQELDEVGLRKNAESDRIQVSGLVV
QDYSHNYSHWNSVKSLSQWLQEEKVPALYGVDTRMLTKIIRDKGTVLGKIEFEGQPVEIT
DPSVRNLVAEVSTKEVKVYGKGNPVKVVAVDCGIKHNIIRLLVKRGAEVHLVPWDQDLTS
LEYDGLFISNGPGNPALAGTLIQNIRKVLESNRPEPVFGICMGNQITALAAGAQSYKLPM
GNRGQNQPVLNVMTGQAFITAQNHGYGIDSESLPLDWSPLFINANDGSNEGIMHNTKPIL
TAQFHPEAKGGPTDTEFLFDAFLSLIKQGKNSSIVSVMPKKPAVPPRVQVSKVLVLGSGG
LSIGQAGEFDYSGSQAVKAMKEENLKTVLMNPNIASVQTNEVGGKQADTVYFLPITPQFV
AEVIKTERPDGILLSMGGQTALNCGVELFQSGVLQEYGVKVLGTPVESIIATEDRQLFAD
KLKEIDERIAPSVAVKSVADALKAADEIGYPVMLRSAYALGGLGSGLCSDKNKLEDTARK
ALAMSTQILVERSLLGWKEVEYEVVRDVADNCVTVCNMENFDPLGIHTGDSIVVAPSQTL
SNEEYHMLRETAIKVVRHLGIVGECNIQYALHPSSLEYCIIEVNARLSRSSALASKATGY
PLAFVAAKLALGIPLPEIKNVVSGKTTACFEPSLDYIVTKIPRWDLDRFHGMSQEIGSAM
KSVGEVMAVGRTFEESIQKALRMCHPSVDGFVPHLPLNRLWSKQQDLLQELAVPSSTRIF
SLAKALHDGVSVDQIHELTAIDKWFLHKLRRITKLEQHLRLYTSSTIPADLLLKVKQEGF
SDRQVGQNLGLSEAEARSLRLRHNIQPWVKQIDTLAAEYPAVTNYLYCTYHGQEHDLDFR
DQSVMVLGCGPYHIGSSVEFDWCAVSSIRTLRQMGKRTVVVNHNPETVSTDFDECDRLYF
EELTLERVLDINHQEGCTGCIVSVGGQIPNNLAMPLHLNGVKILGTNPLQIHRAEERSIF
SSILDELGVAQAPWRALSSLEDAFTFANEVGYPCLLRPSYVLSGSAMNVAYGEEEMKRFL
EEATQVSQEHPVVITKFIRGAREVEVDAVAKSGKVLAHAITEHVEDAGVHSGDATLMLPT
QSISQGALEKVKIATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRASRSFPFVSKTIG
VDLINVATQVMVGEAMNESGLPTLENPIIPVDYVGIKAPMFSWPRLRDADPVLRCEMAST
GEVACFGPNIYSAFLKAMLSTGFKLPQSGILIGIQHSFRPDFLSTAHQLKEEGFKLYATE
ATSAWLNANEVPTMPVSWPSEDGKDNTLPTISNLISDGHIDLVVNLPNNNTKFVKENFLI
RRMAVDHAVPLITNFQVVKLFAKAIKHSSKLDTTSLFHYRQWDAGQQG
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatgctgacagttgggagatttattaggaattttgcgtcagtcggctggaga
tccgcagctcgttctctctgtgttaaggctcagactgctcacctggtccttgaagatggc
acagtgatgaagggatactcctttggaaatggccagtcggcatccggagagctggtcttc
aatacagggcttgtgggatatcctgaggcccttacagaccccagctacagaggtcagatt
cttacacttacctaccccatagtgggcaactatggagtccccaatatgcaggagcttgac
gaagtgggactgagaaagaacgctgagtcggatcgtattcaggtatcagggctagtggtg
caggattacagtcacaactacagccactggaactcggtgaagtctttgtcacagtggctg
caggaggagaaggttccagctttatacggcgtggacactaggatgctgaccaaaatcatc
cgagacaagggaacagttttggggaagattgagtttgaagggcagcctgtagaaattact
gacccgagtgtccggaatctggtggcagaagtttcgacaaaggaagtcaaagtatatgga
aaaggcaatcctgtcaaagtggtggctgttgattgtgggatcaagcacaacattatcagg
ctgctcgtcaagcgcggcgccgaggtgcatttggtgccatgggatcaggacctcacgagc
ctcgagtatgacggcctcttcatctcgaacggccctggaaaccccgctttggctggaacc
ctgatccagaacattcgcaaggtgctggagagcaatcgtccggagcccgtgtttggtatt
tgtatggggaaccagatcacagctttggctgctggtgctcagtcatacaagctgcccatg
gggaacagaggccagaaccagccagtgctgaatgtgatgacaggacaagccttcattaca
gctcagaatcacggctatgggatcgacagcgagtctctgcctctagactggagtccgctc
ttcatcaatgccaacgacgggtccaacgagggcatcatgcacaacaccaagcccatctta
acggcgcagtttcacccagaagcgaaaggtggccccacggatacagagttcctgtttgat
gcgttcctgtctctgataaagcaagggaaaaacagcagcatcgtatcagtgatgccaaag
aaacctgcagttccaccaagagtccaggtgtctaaagtgttggttctcggctccggtggt
ctgtccatcggccaggctggggagttcgactactcgggctcacaggctgtgaaagcaatg
aaggaggagaacctgaagacggtgctgatgaaccccaacatcgcctcggtgcagactaac
gaggtgggaggcaaacaggcagacacggtctacttcctgcccatcacaccccagtttgtg
gctgaggtgatcaaaaccgagaggcctgacggcatcctgctctccatggggggacaaacg
gcactcaactgcggagtggagctgtttcagagcggagtgctgcaggagtacggagtgaag
gttttgggtacacctgtggagtccatcatcgccacagaggaccgacagctgtttgctgac
aagctgaaggagatcgacgagaggatcgcccccagcgtcgctgtgaagtcggtcgcagat
gctctgaaggccgcagacgagatcggatacccggtgatgctgcgttcggcgtatgccctc
ggaggcttgggctccggcctttgcagcgacaaaaacaaactggaagatactgcacgcaag
gctttagccatgagcactcagatcctggtggagaggtctttgctggggtggaaggaagtg
gagtacgaggtggtcagagacgtcgctgataactgcgtcactgtctgcaacatggagaac
ttcgaccccctgggaatccatacaggtgactccattgtagtggcacccagccagactctg
tccaacgaggagtaccatatgctgcgggagacagctattaaagtcgtccgccacctcggc
attgtgggagagtgcaacatccagtacgccctgcacccttcatctcttgagtactgcatc
atcgaggtcaatgcccggctgtccagaagctcagcactggcatctaaagctacagggtac
cctctggcgtttgtagcagcaaaactggcgctgggtattcctcttcctgagattaagaac
gtcgtgtcgggaaaaaccacggcctgcttcgaacccagtctggactacattgtgacaaag
atcccacgctgggacctggatcgcttccatggcatgtcacaggagatcggtagtgccatg
aaaagtgtaggagaggtaatggcggtgggtcgtacattcgaagagagcatccagaaggcg
ctgaggatgtgccacccctccgtggacggctttgtgccacacctgcccttgaatcgactc
tggagcaagcagcaagacctgctccaggagctggcagttccctccagcactcgcatcttc
tcgctagcgaaggcgctgcatgacggagtcagcgtggatcagattcatgagctcacagct
atcgataaatggtttctgcacaaactgaggcgcattacgaagctggagcagcacttgaga
ctgtacaccagctccaccattccagctgatctgttgctgaaggtcaagcaggagggcttt
tcagaccgtcaggtgggccagaacctcggcttgtcagaggcagaggcacggtctctgaga
ctgagacacaacatccagccctgggtcaaacagatcgacacactggctgcagaatatcct
gccgtcactaactatctgtactgcacctaccatggccaggaacatgacctcgacttcaga
gatcagagtgtgatggttttaggttgtggtccttatcacatcggtagcagtgtggagttc
gactggtgtgctgtgtccagtatccgcaccctcagacagatgggcaaacgcacagtggtg
gtaaaccacaacccggagacggtcagcaccgactttgacgagtgcgaccgcctctatttt
gaggagctcacgcttgagcgtgttctggatatcaaccatcaggagggctgtacaggctgc
atagtctcagtgggagggcagattcccaataacctggccatgccgctgcacctgaacggt
gtgaagattctgggcacgaacccgctgcagatccaccgggccgaggagagatctatattc
tccagcatattggatgagctgggagtggcacaggcgccctggagagccctgagctcactg
gaagatgctttcacattcgctaatgaagtgggttacccctgcctcctcagaccctcgtat
gtattaagcggttctgcgatgaacgtggcctacggcgaggaggagatgaagcgattcttg
gaggaggcgacccaggtgtctcaggagcatcctgtggtcattacgaagttcattcgtgga
gccagagaagtggaagtggacgcagtggccaaatcaggcaaggttctagctcacgccatt
acggagcatgtggaggacgccggagttcactcaggagatgccactttaatgcttcccacg
cagtcaatcagtcaaggagctctggagaaggtgaagatcgccacacggaaaattgcaaag
gcgttcgagatttcagggccatttaacactcaatttctggtgaaaggcaacgatgtcatg
gtgatcgagtgtaacctgcgtgcctcgcgttccttcccgttcgtctccaaaaccatcggc
gtggatttgattaacgtggcgacccaggtgatggtgggagaagcgatgaacgagtcaggg
ctccctactctagagaaccccatcattcctgtagactatgttggcattaaggctccgatg
ttttcctggccgcgtctgagagatgccgaccctgtcctgcgctgtgagatggcctccacc
ggagaggtggcttgctttggaccaaatatctactctgcatttttgaaggcgatgctctcc
acagggtttaagcttcctcagagtggaatcctcatcgggatccagcattctttcaggcca
gacttcctgtccactgctcaccagctgaaggaggagggatttaaactgtatgccacagaa
gcgacctccgcttggctcaatgccaacgaagtgcccacaatgccagtctcctggcctagt
gaggacggaaaagacaacacgttaccgacgataagcaatctgatcagtgatggccatata
gacctggtggtaaatcttcccaacaacaacaccaagttcgtgaaggagaacttcctcatt
cgcagaatggctgtggatcacgccgtacccctcatcactaacttccaggtggtgaagcta
ttcgccaaagccattaagcattcaagcaaactggacaccaccagtctcttccactatcgc
cagtgggacgctggacagcagggttag
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integrated database retrieval system
