Silurus meridionalis (southern catfish): 124383118
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Entry
124383118 CDS
T08004
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
smeo04110
Cell cycle
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124383118 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124383118 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124383118 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124383118 (tfdp1a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124383118 (tfdp1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
124383118 (tfdp1a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124383118 (tfdp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
124383118
NCBI-ProteinID:
XP_046701461
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Position
3:complement(15409338..15419313)
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AA seq
407 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPGKGVLSLVTVHPQTVAVGKQLLPKTLGPSNVNIAPQ
VVIGTPQRPSGSSVLLMNSPHTPSSQFITQSQPPDASPWSSGKRSKKGEKNGKGLRHFSM
KVCEKVQKKGVTTYNEVADELVAEFSSGDNHISPNDAQVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQTEQQTNRPPPENSVIHLPFIIINTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVL
KRMGMACGLEVGKCSAEDLKVARSLVPKALEPYVTEMAQGPISNVYMTGTSSANGGRYHI
SSESGADGTMASSSNDSHYSGSRVETPVSYMDDDDDDDDYDENDEDD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgctggtctgattgaggccaatggggagttgaaggttttcattgaccag
aatctgagtcctggaaaaggtgttttgtctttagtgactgttcatccacagacagttgca
gtaggaaaacaacttttgccaaaaacattgggcccttcaaatgtcaacattgctcctcag
gtggtcattgggacacctcaaaggccaagtgggtccagtgtgctcctaatgaacagtccc
cacacacctagttctcagtttatcactcagagccaaccccctgatgcctccccatggtcc
tcagggaaaagaagtaagaaaggagaaaagaatgggaaaggcctgaggcatttttctatg
aaggtgtgcgagaaggtacagaaaaagggtgttacaacatataatgaagtagcggatgag
ctggtggccgaatttagctctggggacaaccacatctccccaaatgatgcgcaagtgtac
gatcagaagaatattaggcggcgtgtatatgatgctctcaatgtgctgatggccatgaac
ataatctcaaaggagaagaaggagatcaagtggattgggcttcctaccaactcggcccaa
gaatgccagaatctggaggtggagaggcaaagacgtttagagagaatcaagcaaaaacag
tcacaactccaagaactcattttacagcaaattgcatttaagaaccttgtgcagcgtaac
cgtcaaacagagcagcaaacaaacagaccaccaccagaaaattcagtcattcacctgcca
tttatcatcataaacaccagcaagaaaacggtcattgactgcagcatctctaatgacaag
tttgagtacctcttcaactttgacagcatgtttgagatacatgatgacattgaagtattg
aagcgcatgggaatggcatgtggcctggaggttggaaaatgctccgctgaagacctcaaa
gtcgccaggagcctggtgcctaaagcactggagccttatgtcacagaaatggcacagggc
cctatcagtaacgtctacatgacggggacctcatctgccaatggaggtcgctatcatatc
agcagtgaaagtggagcagatggaacaatggcctccagctccaatgactctcactacagt
ggttctcgtgtcgaaacccccgtctcttacatggacgatgacgatgacgatgatgactat
gatgaaaacgatgaagatgactaa
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