Silurus meridionalis (southern catfish): 124383136
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Entry
124383136 CDS
T08004
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124383136 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124383136 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
124383136 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124383136 (cacna2d2a)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124383136 (cacna2d2a)
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
124383136
NCBI-ProteinID:
XP_046701488
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Position
1:13228845..13452480
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AA seq
1112 aa
AA seq
DB search
MAICAQSSSLFWLFMVQTVLILCVSWPGTATLRFPQHYTMIHWAGRIEKELNKVLPQVTG
VHQMKSIYNEKKSQFEVKRNSPKDLVDRVAKDIAKLLTGKRKALERLAKEAEQIQTLHPW
RDNITASAIEYYDSKAEFEYSEDNTEGSPSDNLKSISLEFVDDPNFKNKVNYSYTAVQIP
TDIYKGSPTILNELNWTQALERVFIDNSREDPSLRWQVFGSATGVTRYYPATPWKAPNKI
DLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVIEMLDTLSDDDYVNVAQ
FNEKADAVVPCFKTLVQANVRNKKIFKEKVMNMHAKGTTDYKSGFQFAFEQLLNETSAPR
ANCNKMIMMFTDGGEDRAQEVFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYY
FEIPSIGAIRINTQEYLDVLGRPMVLAGNRAKQVQWTNVYQDALGLGLVITGTMPVFNLT
TDGASKNQLILGVMGVDVALSEIKQLTPRYKLGANGYTFAIDPNGYVLLHPNLQPKIINF
REPVTLDFLDAELPDNNKEEIRRQMIDGKPGQRKIKTLVKSVDKRYIDQVTRTYIWTPVD
GTDYSLGLVLPTYSENHIRANLSDQILQVQLKDTTDFESLLPHTFESEGHVLIAPREYCK
ELELTGNNTEFLHNFIALMEKVTPDSKKCDNFLLHNLILDTGIIRQLVEKVWKTKDLNTY
GFLAVFAATDGGITRIFPNKAAETWDEDPEPFNASYYRRSLDNKGYIFRAPYRSQNAIFQ
DQENDTIGILVSTAVEITVGSKNIKPAVVGVKLDLEAWTSKFKILASNQTDDTRQGSQMC
GPTSGCEMDCEAHEDLLCYLIDDGGFLIMSNQIQDWNKIGMFFTEVDPALMHVLYNNSFY
NYKESYDYQSVCGPVPNSNTGAAPRGVFVPTIADLVNVAWWTSAAAWSLFQQLLYGFAYH
NWFITDEVDAGESMDPRETSCVTIQKQFYFGNISSAYSIVQDCENCSRLIHAKRLNNTNL
LFVVAEKLPCNTCDIEKLSQAERELKPEDPCLDLPPPRYRKGPSTCFDYNLAENTTDCGR
GFSFRPSIHTLILLQLLVLSLMACPHVLPFSL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctcaagtcttttctggctcttcatggtgcaaacggtgttg
atcctgtgtgtgtcctggcccggaacggcgacgcttcgcttcccgcagcactacacgatg
atccactgggcaggccgtatagagaaggaattgaataaggttctaccacaggtcactgga
gttcaccagatgaaatcaatttacaacgagaagaagagtcagtttgaggtgaagaggaac
tcccccaaggacctggtggacagagtggctaaagacatcgccaagctgctcaccggcaaa
cgcaaagcgctcgagaggctggccaaagaggcggagcagatccagacgttgcacccctgg
cgggacaacattacagcgagcgcaatagagtactacgactccaaggccgagtttgaatat
tctgaagacaatactgaaggaagcccttcggataacttgaagtccatttcactggagttt
gtggacgaccccaatttcaaaaacaaagtcaactactcctacactgccgtgcagatccca
actgatatctacaagggctctcccactattctgaatgagctgaactggacacaggcgctg
gagcgggtttttatagataacagcagagaggacccgtcactgcgctggcaggtgtttgga
agtgccaccggtgttactagatactacccagcgactccatggaaagcacctaacaagatc
gacctgtatgatgtgaggagacggccttggtacattcagggtgcctcttctcctaaagat
atggtcatcattgtggatgtgagcggcagcgttagcggactcactttaaagctgatgaag
acctctgtgattgagatgctggacacactgtctgacgatgattatgtaaatgtagcacag
tttaatgaaaaggcagacgctgttgtcccgtgctttaagacgctggtccaagctaacgtg
cgaaacaaaaagatcttcaaagagaaggtgatgaacatgcacgcgaaggggacgaccgac
tacaaatccggctttcagtttgcctttgagcagctgctaaatgagaccagcgctccaagg
gcaaactgcaataagatgataatgatgttcacagatggaggagaggatcgagctcaagag
gtcttcgagaagtacaactggcccaataaaacagttcgagtttttaccttctccgtgggg
cagcacaactacgatgttactccactgcaatggattgcatgcgccaacaaaggatactac
tttgagatcccatctatcggagcaatcagaatcaacacacaggagtatctagatgtcctg
ggaaggcccatggtgttagcaggcaaccgtgcaaagcaagttcagtggaccaatgtgtac
caggatgctctgggcttgggtttggtcattactggtacaatgccggtcttcaatcttact
actgatggggcctccaagaatcagcttattctaggagtcatgggtgtagatgttgcactt
agtgaaattaagcagctcacaccgcggtataaacttggagccaatggttacacttttgcc
atagaccccaatggctatgttctgttgcaccctaacttacaacctaagatcattaatttt
agagaaccggttacactcgacttcctggatgcagagctgccagacaacaacaaggaggag
atccgccgccagatgatcgacggcaagccgggtcagaggaaaatcaagacgctagttaag
tctgttgacaagcgttatattgaccaggtaacaaggacttatatatggacaccagtagat
ggcacagactacagcctgggtttggtgctgcccacatacagcgagaaccacatcagggcc
aacctcagcgatcagatcctgcaagtccagttaaaagacaccacggattttgaatctctg
ctgccacacacttttgagtcagagggacatgtgttgatagccccaagggaatactgcaag
gagctggagcttactggcaacaacacagagttcctgcacaacttcatcgctctgatggag
aaagtcacgccagactctaaaaaatgtgacaacttccttctgcataacctgatcctggac
acgggcattatcaggcagctggtggagaaagtgtggaaaacaaaggacctcaacacgtat
ggatttttggccgtctttgcagctacagatggaggaatcactcgtatttttcccaataaa
gccgctgagacatgggacgaggatccagagccatttaatgccagttactaccgccgcagt
ctggacaacaagggctatatctttagagcaccctatcgtagtcaaaatgcaatctttcag
gatcaagagaatgacacaattggcatcctggtcagtacagcagtggaaattacggtgggg
tccaaaaacatcaagccagccgttgtgggtgtaaagttggaccttgaagcttggacatca
aagtttaaaatccttgccagcaaccaaactgatgatactcgccagggttctcaaatgtgt
ggaccaaccagtggctgtgagatggactgtgaggcccatgaggacttgctgtgttacctg
attgatgatggtggcttcctcattatgtccaatcaaattcaagactggaacaagatcggc
atgttcttcactgaggtggacccagctctgatgcatgtgctctacaacaactccttctac
aattacaaagagtcttatgactaccagtctgtgtgtggacctgtgcctaacagcaacaca
ggagcagcacctagaggagtgtttgtgcccaccattgcggacctggtaaacgttgcctgg
tggacctcagcagctgcatggtctctgtttcagcagttactttatgggtttgcctaccat
aactggttcattacagatgaagttgatgcaggagagagcatggaccccagagagactagc
tgtgtcacaatacagaagcagttctactttgggaatatcagcagtgcctacagcatagtg
caagattgtgagaactgctccaggttgatccatgccaagagattaaacaacaccaacttg
ctgtttgtggtggctgagaagctgccctgcaacacatgtgacatagagaaactgtctcag
gctgagagagaactaaaaccagaagatccatgtctggacctgccaccacctcggtataga
aaagggccctctacttgtttcgattacaaccttgcagagaacactacagattgtgggcga
ggattctccttccgcccttccatccacactttaatcctcctccagctcctcgtcctctct
ctcatggcctgcccccatgtcttgcctttttccctttaa
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