Silurus meridionalis (southern catfish): 124383301
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Entry
124383301 CDS
T08004
Symbol
wdr75
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124383301 (wdr75)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124383301 (wdr75)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124383301 (wdr75)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_HPS5
WD_LRWD1
WD40_RFWD3
Beta-prop_IP5PC_F
PEP5_VPS11_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
DUF1623
Motif
Other DBs
NCBI-GeneID:
124383301
NCBI-ProteinID:
XP_046701789
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Position
3:2837852..2858624
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AA seq
832 aa
AA seq
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MVECRETRVVRCGGSKISFRAPVITRDSRFLLCASGDSVKVFSTTTEECVHVLEGHTHQI
SGVALNPNNHLQVFSCSLDGTLRLWDFTDGILIKTFTIRQPIFSLYVSEKHLGVVFIIVP
LDTQQNSECFQLVAVHLPKVVEQEVEVKDLSAVLTDISPNPGATAFGREGEYLASVKGLQ
LHVFFFRNQKSFRFNLKANDKKGARNAFTCVACHPKDDCIATGHEDGKIRFWRNFNQKKE
YTYSTVHWHHDAVNTLCFTPEGTHLLSGGVESVLVQWHFAEVNKKEFLPRLGGAISHISV
SADGQTYSTSHSNNKITIIHCSFKVSAVIQGLIHGETVRTGLMIDPRSSALVLSGKPGHL
QFYSLQRDKQLYSLDIVQQEYIYEAGLDQFDVVKAAFDTTGSWLATVEERGARCSSLEFS
LKLWGYDESAQSFELNTTITTAHNDRITAMCFNPASETTMLVTTAKDGKFKVWLLGSVSD
TQKEQASWSCDFVGSYHCFHPTNCCFSADGSLLAVSFGEVVTVWSVDTWGLLTTLCQPPG
LIRDLCFGRLSCSKYLLGTTTKNLLCCWNLLTCTLEWSTSMDVCMLRSDPLSENVAAFCY
HSENTDLFVFKPSEPRPLFTQKAVCSGKVQHSVFAPRDETLDSCDERTQWLNRSRLYFLT
ENMDLLTFSTRAEDERILNLRKQLLVDDSVAVTPFYLLLGKHNPAQEKDDSASGQTADDP
SQLPQGSTTVNELLHTPAHVLPAASVLCSMFVRSLLISTGSRKDEEPLEQEVESEKEEDD
SEEEMETSERQQDVRSLGSVLEPSLQLSKEEERELRRVRKTDFSWVSSCVNC
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtgcagggagacccgcgtggttcggtgcggcggcagtaaaataagtttcaga
gctccggtgatcactcgagactccaggttcttgttgtgtgcttctggagactcggtgaag
gttttcagcaccactacagaggagtgtgtccatgtgctggagggacacacacaccagatc
agtggtgtcgccctgaaccccaacaaccaccttcaggtcttctcctgctcactagatggc
actctgagactgtgggacttcactgatgggatcctcattaagacgtttactatcagacag
ccgatcttctccttgtacgtctctgagaaacacctcggggtcgtctttattattgttcct
ctggacactcagcagaatagcgaatgtttccagttggtagctgtgcatctccccaaggtg
gtggagcaggaagtggaggtgaaggatctctcagctgtgcttactgatatttctccgaac
cctggggctacagcgttcggccgtgagggtgaatatctggcctctgtaaagggtctgcag
ctccacgtgtttttcttcaggaaccaaaagtcgttcaggttcaacctgaaggccaacgat
aagaaaggagccagaaacgcgttcacctgtgtggcctgtcacccgaaagacgactgtatc
gctacgggacacgaggacggcaaaatacgtttctggagaaacttcaatcagaagaaagag
tacacgtattccactgtgcactggcaccatgacgctgtgaacactctgtgtttcactcca
gagggtacacacctgctgagtggaggcgtggagtctgtgctcgtccagtggcattttgcc
gaggtcaataagaaggaattcctcccgcgtctgggcggagccatttctcatatctcagtc
tctgcagatggacagacgtacagcacgagtcactcaaacaacaagatcaccatcatccac
tgcagcttcaaagtgtctgcggttattcaaggtctcatccatggagaaaccgttcgcacg
ggtctgatgattgacccacgcagcagcgctctggtgctgagcggaaagccgggccatctt
cagttttactctctacagcgtgacaagcagctttacagccttgacatagtgcagcaggag
tacatctatgaggcaggcttggaccagtttgacgtggtgaaggcagcgtttgacaccaca
ggctcgtggttggctacggtggaggagagaggcgccagatgctccagtcttgagttttct
ctcaaactttggggatatgacgaaagtgcacaaagctttgaactcaacaccacaataacg
actgcccacaacgacaggattacagccatgtgctttaaccctgcctcagagaccaccatg
ctggtgaccaccgccaaggacggcaagttcaaagtctggctgctcggctcagtctcggac
acacagaaggagcaggcctcctggtcatgtgactttgtgggcagctatcactgctttcac
ccgaccaactgctgtttctcagctgacggctccctgctggctgtgagcttcggggaggtg
gtgactgtgtggagcgtggacacctgggggcttttgaccacactgtgccaacctccaggg
ttaatcagggatctctgctttggacgtctgagctgctccaaatacctgctcggcaccacc
acgaaaaatctgctgtgctgttggaaccttctcacctgcacattggaatggagcacgtcg
atggacgtgtgtatgctgcggtcagatcctctttctgaaaacgtggctgctttttgctac
cactctgaaaacactgacttgtttgttttcaaacccagtgagccgaggcccctgtttacc
cagaaggccgtgtgctcgggaaaagttcagcactctgtgtttgcaccgagagatgagacg
ctggatagctgtgacgagagaacgcagtggctcaacagatctcgcctttacttcctcacg
gagaacatggacttactgaccttcagcaccagagcagaggatgagcgaattctgaacttg
aggaaacagctgctggtcgatgacagtgtggccgttacgccgttttacctgctgctgggg
aaacacaacccggctcaggagaaggacgattcggcttccggtcagactgctgatgatccg
tctcagcttcctcaaggatccacgactgtcaacgagttgctccacactccagctcacgtg
cttcctgcagcctcggtcctgtgctcgatgttcgtcagatctctcctcatctccaccggg
agcagaaaagacgaggagcccctcgaacaggaagtagagagcgagaaggaggaagatgat
tcggaggaagaaatggaaaccagcgagcgtcagcaggacgttcggtctctgggctccgtc
ctggagccgtctctgcagctctctaaagaggaggaaagggaactgaggagagtgagaaag
actgactttagctgggtttcgagttgtgtcaattgttag
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