KEGG   Silurus meridionalis (southern catfish): 124383301
Entry
124383301         CDS       T08004                                 
Symbol
wdr75
Name
(RefSeq) WD repeat-containing protein 75
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124383301 (wdr75)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smeo03009]
    124383301 (wdr75)
Ribosome biogenesis [BR:smeo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    124383301 (wdr75)
SSDB
Motif
Pfam: Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_HPS5 WD_LRWD1 WD40_RFWD3 Beta-prop_IP5PC_F PEP5_VPS11_N Beta-prop_TEP1_C WDR90_beta-prop_4th DUF1623
Other DBs
NCBI-GeneID: 124383301
NCBI-ProteinID: XP_046701789
LinkDB
Position
3:2837852..2858624
AA seq 832 aa
MVECRETRVVRCGGSKISFRAPVITRDSRFLLCASGDSVKVFSTTTEECVHVLEGHTHQI
SGVALNPNNHLQVFSCSLDGTLRLWDFTDGILIKTFTIRQPIFSLYVSEKHLGVVFIIVP
LDTQQNSECFQLVAVHLPKVVEQEVEVKDLSAVLTDISPNPGATAFGREGEYLASVKGLQ
LHVFFFRNQKSFRFNLKANDKKGARNAFTCVACHPKDDCIATGHEDGKIRFWRNFNQKKE
YTYSTVHWHHDAVNTLCFTPEGTHLLSGGVESVLVQWHFAEVNKKEFLPRLGGAISHISV
SADGQTYSTSHSNNKITIIHCSFKVSAVIQGLIHGETVRTGLMIDPRSSALVLSGKPGHL
QFYSLQRDKQLYSLDIVQQEYIYEAGLDQFDVVKAAFDTTGSWLATVEERGARCSSLEFS
LKLWGYDESAQSFELNTTITTAHNDRITAMCFNPASETTMLVTTAKDGKFKVWLLGSVSD
TQKEQASWSCDFVGSYHCFHPTNCCFSADGSLLAVSFGEVVTVWSVDTWGLLTTLCQPPG
LIRDLCFGRLSCSKYLLGTTTKNLLCCWNLLTCTLEWSTSMDVCMLRSDPLSENVAAFCY
HSENTDLFVFKPSEPRPLFTQKAVCSGKVQHSVFAPRDETLDSCDERTQWLNRSRLYFLT
ENMDLLTFSTRAEDERILNLRKQLLVDDSVAVTPFYLLLGKHNPAQEKDDSASGQTADDP
SQLPQGSTTVNELLHTPAHVLPAASVLCSMFVRSLLISTGSRKDEEPLEQEVESEKEEDD
SEEEMETSERQQDVRSLGSVLEPSLQLSKEEERELRRVRKTDFSWVSSCVNC
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggtggagtgcagggagacccgcgtggttcggtgcggcggcagtaaaataagtttcaga
gctccggtgatcactcgagactccaggttcttgttgtgtgcttctggagactcggtgaag
gttttcagcaccactacagaggagtgtgtccatgtgctggagggacacacacaccagatc
agtggtgtcgccctgaaccccaacaaccaccttcaggtcttctcctgctcactagatggc
actctgagactgtgggacttcactgatgggatcctcattaagacgtttactatcagacag
ccgatcttctccttgtacgtctctgagaaacacctcggggtcgtctttattattgttcct
ctggacactcagcagaatagcgaatgtttccagttggtagctgtgcatctccccaaggtg
gtggagcaggaagtggaggtgaaggatctctcagctgtgcttactgatatttctccgaac
cctggggctacagcgttcggccgtgagggtgaatatctggcctctgtaaagggtctgcag
ctccacgtgtttttcttcaggaaccaaaagtcgttcaggttcaacctgaaggccaacgat
aagaaaggagccagaaacgcgttcacctgtgtggcctgtcacccgaaagacgactgtatc
gctacgggacacgaggacggcaaaatacgtttctggagaaacttcaatcagaagaaagag
tacacgtattccactgtgcactggcaccatgacgctgtgaacactctgtgtttcactcca
gagggtacacacctgctgagtggaggcgtggagtctgtgctcgtccagtggcattttgcc
gaggtcaataagaaggaattcctcccgcgtctgggcggagccatttctcatatctcagtc
tctgcagatggacagacgtacagcacgagtcactcaaacaacaagatcaccatcatccac
tgcagcttcaaagtgtctgcggttattcaaggtctcatccatggagaaaccgttcgcacg
ggtctgatgattgacccacgcagcagcgctctggtgctgagcggaaagccgggccatctt
cagttttactctctacagcgtgacaagcagctttacagccttgacatagtgcagcaggag
tacatctatgaggcaggcttggaccagtttgacgtggtgaaggcagcgtttgacaccaca
ggctcgtggttggctacggtggaggagagaggcgccagatgctccagtcttgagttttct
ctcaaactttggggatatgacgaaagtgcacaaagctttgaactcaacaccacaataacg
actgcccacaacgacaggattacagccatgtgctttaaccctgcctcagagaccaccatg
ctggtgaccaccgccaaggacggcaagttcaaagtctggctgctcggctcagtctcggac
acacagaaggagcaggcctcctggtcatgtgactttgtgggcagctatcactgctttcac
ccgaccaactgctgtttctcagctgacggctccctgctggctgtgagcttcggggaggtg
gtgactgtgtggagcgtggacacctgggggcttttgaccacactgtgccaacctccaggg
ttaatcagggatctctgctttggacgtctgagctgctccaaatacctgctcggcaccacc
acgaaaaatctgctgtgctgttggaaccttctcacctgcacattggaatggagcacgtcg
atggacgtgtgtatgctgcggtcagatcctctttctgaaaacgtggctgctttttgctac
cactctgaaaacactgacttgtttgttttcaaacccagtgagccgaggcccctgtttacc
cagaaggccgtgtgctcgggaaaagttcagcactctgtgtttgcaccgagagatgagacg
ctggatagctgtgacgagagaacgcagtggctcaacagatctcgcctttacttcctcacg
gagaacatggacttactgaccttcagcaccagagcagaggatgagcgaattctgaacttg
aggaaacagctgctggtcgatgacagtgtggccgttacgccgttttacctgctgctgggg
aaacacaacccggctcaggagaaggacgattcggcttccggtcagactgctgatgatccg
tctcagcttcctcaaggatccacgactgtcaacgagttgctccacactccagctcacgtg
cttcctgcagcctcggtcctgtgctcgatgttcgtcagatctctcctcatctccaccggg
agcagaaaagacgaggagcccctcgaacaggaagtagagagcgagaaggaggaagatgat
tcggaggaagaaatggaaaccagcgagcgtcagcaggacgttcggtctctgggctccgtc
ctggagccgtctctgcagctctctaaagaggaggaaagggaactgaggagagtgagaaag
actgactttagctgggtttcgagttgtgtcaattgttag

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