Silurus meridionalis (southern catfish): 124383331
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Entry
124383331 CDS
T08004
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04148
Efferocytosis
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124383331 (rab5b)
04145 Phagosome
124383331 (rab5b)
04137 Mitophagy - animal
124383331 (rab5b)
04148 Efferocytosis
124383331 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124383331 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124383331 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124383331 (rab5b)
04031 GTP-binding proteins [BR:
smeo04031
]
124383331 (rab5b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
124383331 (rab5b)
Endosome - Lysosome transport
124383331 (rab5b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124383331 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
124383331 (rab5b)
Exosomal proteins of colorectal cancer cells
124383331 (rab5b)
Exosomal proteins of melanoma cells
124383331 (rab5b)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
124383331 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
124383331
NCBI-ProteinID:
XP_046701835
LinkDB
All DBs
Position
3:complement(8669834..8678161)
Genome browser
AA seq
214 aa
AA seq
DB search
MSTRANPRTNGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKSDLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgtgcgaaccccaggaccaacgggaacctgccccagaccaagatctgccag
tttaagctggtgctgctaggggacatggcagtgggcaagtccagcctggtcttgcgcttc
gtcaagggccagtttgatgagttccaggagaccaccatcggagctgctttcttggctcag
tcagtttgcctggacgataccacggtgaagttcgagatttgggacacagccggacaggag
cgctaccacagcctggcccctatgtactatcgcggggcccaggcagctatcgtagtgttt
gatattacaaaaccggagacgtttgagcgagcaaaggcctgggtgaaggaactccagagg
caggcaagtcccaacatcgtcatcgcgctggcaggaaacaagtccgacctcgcggagaag
agactggtggagtacgaggaggctcagacgtacgctgaagacacaggcttgttgttcatg
gagacgtcggccaagaccgctatgaacgtgaacgatctattcctggccattgcaaagaag
atgccgaaaacagacactcagaacccgacgcacgccgcccggcacaggggagtcaacctg
caggacccggacgcccagtccacccgaagctgctgtgggaactaa
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