Silurus meridionalis (southern catfish): 124383367
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Entry
124383367 CDS
T08004
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00100
Steroid biosynthesis
smeo01100
Metabolic pathways
Module
smeo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124383367 (lss)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
124383367 (lss)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Pec_lyase
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
124383367
NCBI-ProteinID:
XP_046701917
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All DBs
Position
3:complement(22498220..22509920)
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AA seq
741 aa
AA seq
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MTEGTCVRRRGGPYKTTAVTELTNWRLSNVEGRQTWKYLEDGDTEEREQNFLEAHSVGLE
TSKFVSASPAAQTAGEAAHKGMEFYSGLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
SEAWKKEMVRYLRSVQLPDGGWGLHVEDKSTVFGTALNYTTLRIMGVGPDDPDMVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPTWIPAHPSTLWCHCRQVYLP
MSYCYAIRLSAEEDSLVLSLRQELYVQDYSTINWPAQRNNVAASDLYTPHSTLLTVAYSM
LNLYEAHHSTALRGKAVKELYDHIQADDRFTKCISIGPISKTINMLVRWHVDGPTSPAFQ
EHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAIQAFLEAGAQKDPRFTECLIKAHQFLN
ITQVKENPPDYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCSFISEHIP
SQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHHAYPEHRAQEIRSTLQQGLDYCRRMQKPDGSWEGSWGVCFTYGVWFGLEAFACM
GHVFQDGYDGQVCAEVRRACDFLLSKQMEDGGWGEDFESCEQRCYVQSQNSQIHNTCWAL
LGLMAVRYPDIIVIERGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFSVWTL
GRFSRLYPSSSLARKLGSAAK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggaacgtgtgttaggagaagagggggtccctataagaccacagcagtgacc
gagctgaccaactggaggctcagtaatgtggaaggaaggcagacatggaaatacctggag
gatggagacactgaggagagggagcagaacttcttggaagctcactctgtgggtcttgag
acgagtaagtttgtctcagcttccccagcagctcagacagcaggtgaagccgctcataaa
gggatggagttttatagcggtcttcaggctgaggatggccactgggctggagactatgga
ggaccacttttcttgcttccaggtcttctcataacctgccatgttgctaaaatcccttta
tcagaagcctggaaaaaggagatggttaggtatctgcgttcagttcagctaccagatggt
ggctggggtttacatgtagaagacaagtcaactgtatttggcacagctcttaattacacc
acactgagaataatgggagttgggcctgatgacccagacatggttcgggcaaggaacaac
ttacacagcaaaggaggtgctgtgggtataccgtcttggggaaagttctggttggccatc
ctcaatgtgtacagctgggaagggatgaacacactctttccagagatgtggctgtttcca
acttggataccggcacacccgtccactttgtggtgccactgcaggcaggtctaccttccc
atgagctactgttatgccatcagattgtctgcagaggaggactcactggtgctcagcctg
agacaggaactgtatgtccaagattattcaactattaactggccagctcaaaggaacaat
gttgcagcgtcagacttgtacacccctcacagcactctgctcactgtcgcttactcaatg
ctgaacctatatgaggcacatcacagtactgcattgagaggaaaggctgtgaaggaactg
tacgatcatatccaagcagacgatcgctttacaaagtgcattagcatcgggccgatctca
aaaaccattaatatgttggtgcgctggcatgttgatggacccacatcacctgccttccag
gagcatgtggcgaggattccagactacctttggctaggtcttgatggcttgaagatgcag
ggaaccaatggttctcagctatgggatactgcctttgccatacaagcatttcttgaggca
ggtgcccagaaggaccccaggtttacagagtgtttaataaaggcccaccagttcctaaat
ataactcaggttaaagaaaatcccccagactacaagaagtattacaggcaaatgaacaag
ggcggctttccctttagtacacgtgactgtggttggatcgtagctgactgcacagcagag
ggcctgaagtcagtgatgttactgcaggagcagtgcagtttcatctcggagcacattccc
tcacaaagactctttgatgcagtcaatgtgcttttaagcatgagaaattctgatggtggc
tttgctacatatgaaactaaacgtggagggaaactgctggagctactcaacccatcagag
gtgtttggtgatatcatgatcgactacacctatgtggagtgcacatctgctgtgatgcaa
gctctgaagcacttccaccatgcttatcctgagcacagagcacaggagattaggagtaca
cttcagcagggacttgactattgccgaaggatgcaaaagcctgatggttcatgggaaggg
tcatggggtgtgtgctttacatatggagtatggtttggtttggaggctttcgcatgcatg
ggtcatgttttccaggatggatatgatgggcaggtatgtgccgaagtgaggcgtgcctgt
gacttcctgctctctaagcagatggaggatggaggttggggagaggattttgagtcgtgt
gagcagaggtgctatgtccaaagtcaaaattcccagattcataacacctgctgggctctg
ctgggtctgatggcagtcaggtaccctgacatcatcgtcattgagcgtggaatacaagtt
ttgattgacaagcagcttcccaatggagattggccacaagagaacatctctggtgttttt
aacaagagctgtgctatcagttacacgtcctacagaaacgtgttttcagtttggactctg
ggcagattctcacgtctttacccctccagctcacttgctaggaaacttggaagcgctgca
aaatga
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