Silurus meridionalis (southern catfish): 124383391
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Entry
124383391 CDS
T08004
Symbol
larp4ab
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 4
KO
K18763
la-related protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124383391 (larp4ab)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124383391 (larp4ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Se_S_carrier
SET_assoc
DUF6480
Motif
Other DBs
NCBI-GeneID:
124383391
NCBI-ProteinID:
XP_046701955
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Position
1:complement(35280589..35289480)
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AA seq
682 aa
AA seq
DB search
MLLFVEVTTKGTALNPNAKVWQEVSAPPPQSAEEATGASDWPQEDHTPNEHLDGCKGYEV
AYGDSAPSVDSNQTDLEYSSYHLGEEEMSEESLRESLRKQLEFCFSRENLSKDLYLISQM
DSDQFIPICTIANMEGVKLLTSDLDLIVELLKASPMVQVDEKGEKVRPNHKRCIIILREV
PESTPVEEVEALFKSEKCPRVISVEFAHNNNWYITFQSDTDAQQAYRYLREEVKMFQEKP
IMARIKAINTFFAKSGYAAVDSAAYAGSAQSPYSSPLYLQQVFQPQQYPVCSLIPPSWNP
SSTPYFETPLAPFPNGTFNGFSTIGSYKSGSSSSAGVSRHFPRINRSHMKPQSRADGLQT
DRAGLSGTQSPHISSTGLNSDFITSPESPPSVSENTHNDPGSRTRRGSYRGLRHRREDER
TRSLPAAEVLTPLPKFDLETSNFPPLPGGVTGPSPRGVATWTESVLENCMADVVKGLNRD
KVYCRKQEVNSQAAKEEALSPVSATPISTPVPQDTPSSSVPPPVKNPDVSQMLPDLSPAP
ILTAAQLDSTPKSTHSTPSDVQEPRKLSYAEVCQKPRKDPPPEPASCPSPTPSLDPAQTP
PAASQPLREVGVNKAESEPSRRSEKMFERRLPREQHRRWSSGRGAGFKQLRXAPQGTRSS
PHMGYNNRRSGKEQNIPPRSPK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgttcgtggaggtgaccactaaaggaactgccttgaatcctaatgctaaagtg
tggcaggaagtctcggctcctccccctcagagtgctgaggaggcgacgggggcttctgat
tggccgcaggaagaccacacccctaatgaacatctggacggatgtaaaggatacgaagtc
gcatatggagactccgccccctctgtggactccaaccaaacagacctggagtactcctcc
taccacctgggtgaggaagagatgtctgaggagagtctgagggagtctcttagaaaacag
ttggagttctgcttctccagagagaacctatcgaaggacctgtacctgatctctcagatg
gacagtgatcagttcattcccatctgcaccatcgcgaacatggagggtgtgaagctcctg
acctcagacctggatctgattgtggaattgctgaaagcatctcccatggtccaggtggat
gagaaaggggagaaggtccgacccaatcacaagcgctgcatcatcatccttagagaagtt
cctgagagcacacctgtggaggaggttgaggctctgtttaaaagtgagaagtgtcctcgg
gtcatcagtgtggaatttgctcacaataacaactggtacatcaccttccagtctgatact
gatgctcaacaggcgtacagatatttacgggaggaagtgaaaatgttccaggaaaaaccc
ataatggctcgtattaaggccattaacactttctttgcgaagagcggttacgcggccgtg
gactctgcggcatatgcgggaagcgctcagtctccgtactcgtctccgctctacctgcag
caggtgttccagcctcagcagtatcctgtctgcagcctcatccctccatcctggaacccc
tcatctacaccttactttgaaacaccactggctccttttcccaacggaacctttaatggt
ttcagcactataggaagctataagagtggctcttcttcctcagcaggtgtttcccgtcac
ttcccccgcatcaaccggagtcatatgaagcctcagtcccgtgctgatggtcttcagaca
gacagagcaggattgagtggtacacagagcccccacatctccagcaccggactgaactcg
gacttcattacgtcccctgagtctcctccatctgtcagtgagaacacccacaatgacccg
ggcagcaggaccaggagaggaagttatcgaggcctgaggcacaggagagaggacgagcga
acgaggtctctcccagcagctgaggttctaactccgcttcccaagtttgacctggagacc
tccaacttccctcctctgccggggggcgtgaccgggccgtcaccgaggggcgtggccacg
tggactgagagtgttctggagaattgtatggctgatgtggtgaaaggtctgaacagagac
aaggtgtactgcaggaaacaggaagtgaattcccaagctgctaaagaggaagcgctatct
ccggtttctgccacacccatatccacacctgttccacaggacacgcccagctccagtgtt
ccacctccggtgaagaacccagatgtgtctcagatgcttccagacctcagtcctgctcca
atcctcactgctgctcagcttgactccacccctaaatccacacactccaccccctctgac
gtacaggagcctcggaaactgagctacgccgaggtgtgtcagaaaccccgtaaagaccca
cctccagaacctgcgtcctgcccgagccccacccccagcctcgaccccgcccagactcca
cccgccgccagtcagccgcttcgcgaggtcggagtcaacaaagccgagtcggagccgagc
cgtcgttccgagaaaatgtttgaacgaagattgccgcgtgagcagcaccgccgctggagc
tccggcaggggggcggggtttaaacaactaaganccgcccctcaaggaactcgctcctcc
cctcacatgggctacaataacagacgcagcggcaaagaacagaacatcccgccgagatca
cccaagtga
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