Silurus meridionalis (southern catfish): 124383398
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Entry
124383398 CDS
T08004
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124383398 (dbr1)
03009 Ribosome biogenesis [BR:
smeo03009
]
124383398 (dbr1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124383398 (dbr1)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
90S particles
RNase
124383398 (dbr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
EB1_binding
Motif
Other DBs
NCBI-GeneID:
124383398
NCBI-ProteinID:
XP_046701958
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All DBs
Position
3:8658017..8666543
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AA seq
510 aa
AA seq
DB search
CALAGGRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVVRYRGIR
IGGLSGIFKTHDYRKGHYEFPPYSQETLRSVYHIRNSDVFKLKQVRMPIDVFMTHDWPRG
IYHYGSTEQLLRKKKFLREEVESGTLGSPAAAELLDHLQPSYWFSAHLHVKFAAMMQHEA
KGNAAPKTTRFLSLDKCLPYRDFLQVVEIADRPGSSEQLEYDPEWLAILKATTRLQKPSP
NIWHPPENNGLHSRWDYSVSEEAMLEIVSALNGDLSIPENFSPTVPAYDPSRPQHHAPPA
YCTNPQTTELCATLGLVDIYALAGQSAQISTSCREEGEDEDDEDNQSSGSTDETSEYPTD
TSMLSNSYNPDEITLEDEWEKGGEEEEEEKDGGEVQKTGTDAVVPEAPLGAQDSDRDSSP
QRDAVGRLVLPAPRNTSETDEPLDMPLRCPPPSAPCFSHTSSEEEGATAPARVPKRHSGE
TKGALTPTGSTPKIKRRNQTIYAAADDEES
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
tgtgcactggctggtggaaggtattattcaggggagaagaaagcgccggtcctgaccatc
ttcatcggtggcaaccatgaagcttcgaaccatctgcaagagcttccgtatggcggctgg
gtggctccgaacatatactatttgggttatgccggcgtcgtgcgctacagaggtatacgg
atcggtggcctttccgggattttcaaaacgcacgattaccgaaaagggcactatgagttt
ccaccatacagccaagaaaccctgcgcagcgtctaccacatccgaaacagcgacgtcttt
aagcttaaacaggtccgcatgcccatagatgtgttcatgacgcacgactggccacgaggc
atctaccactatggaagcacagagcagttactgaggaagaagaagttcctgcgtgaggag
gtggagtcgggcacactgggcagtccggccgccgccgagctcctcgatcacttacagccc
tcctactggttctctgcacatctgcacgtcaaattcgctgcaatgatgcagcacgaggcg
aagggtaatgctgctcctaagacgaccagattcctctctctggacaagtgtcttccttac
agagactttcttcaggtggtggagatcgcagatagacccggctcctctgaacagctggag
tatgatcctgagtggttagctatcttgaaggccaccactcgccttcagaaaccgtcacca
aacatctggcacccgcctgagaataacggccttcactctcgttgggactacagtgtatca
gaggaagccatgttggagatagtgagtgctttaaatggtgatctcagcatccctgagaac
ttcagtccaaccgttcccgcttatgacccttcccgccctcagcaccacgcccctccggcc
tactgcaccaacccccaaaccactgagctgtgtgccaccctgggcctcgtcgacatctac
gccctggcaggccagagtgcgcagatctctacatcctgcagagaggaaggagaagacgag
gacgacgaggacaaccagagctcgggtagcacagacgaaaccagcgagtaccccactgac
acctcgatgctctcaaactcctacaaccctgatgagatcaccctcgaggatgagtgggag
aaggggggggaagaggaggaggaggagaaggatggaggagaggtacagaagaccgggacg
gatgcagtggttcccgaggctccattaggagcccaggacagtgatcgggacagcagcccc
cagcgagacgctgtgggcagactcgttttaccagctcctcgcaacacatccgagacggac
gagcccttagatatgcctctcagatgtcctccgccttctgcaccatgtttctcgcataca
agctcagaagaagagggcgccacagcaccagcgagagtccctaagcgccatagtggagaa
accaagggagcattaacccctacaggcagcaccccaaagatcaaacggcgcaatcagacc
atctatgcagcagctgacgacgaggagagttag
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