Silurus meridionalis (southern catfish): 124383640
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Entry
124383640 CDS
T08004
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124383640 (cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124383640 (cntn4)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Contactins
124383640 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Others
124383640 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Ig_5
Pur_ac_phosph_N
Ig_4
V-set_CD47
C2-set_2
Tissue_fac
NDNF
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
124383640
NCBI-ProteinID:
XP_046702281
LinkDB
All DBs
Position
1:complement(10598260..10725439)
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AA seq
1021 aa
AA seq
DB search
LIISLISLSLTVDNVLQSPIITKQPGSIVFPVDSLEKSQEVVFSCEAQGQPPPFYRWKLN
GTSIDPTFDSRYTLFGGNLRITQLNKDQDSGIYQCFASNSFGTIVSRKASLTFAYLENFR
THRRSAVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSFVKQDSRRFVSQETGNLYIAK
VEPSDVGNYTCVVTNTVTKTHVHGPPTPLILRTDGVMGEYEPKIEVQFPEVVQVAQGATV
KLECFALGNPVPSIIWRRVDGVPFSRKVDMRKASGVLEIPYFEQDDAGTYECVAENSKGR
NSVQGKLSFYAPPQMIEKPQDMQKAIDDSLVWECMAIGRPKPSYRWMKNGENLEPTEERV
QVVNGALSISHLVMSDAGIYQCVAGNKYGEVYSNAELRVIAVAPDFGANLLKSHILVKEG
GDVLIDCRPKMSPRGLITWKKGSETLRENSRMTVLESGSLRISNAMKSDAGLYTCVARNQ
FGVASSSGTLLVKEATIITTAPSTLDVTVGESIVLPCQVTHDHSLEVKFTWFFNEQLIHF
GSHGGYFEKVGSHSSGDIMIRNIQMKHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSI
HVEELTDSTVSLSWKPGPDNHSPINAYTIQARTPFSLGWQAVTTVPEEVGGRRLTATVIE
LSPWVEYEFRVVAINALGTGEPSKPSKQVRTKEALPKVTPANVSGGGGTRSELVITWEPV
PEELQNGPGFGYVVAFRPYGATGWMQAAVPSPEASKYVFKNESIQPFSKFQVKVGVYNNK
GEGPFGPVVTIYSAEEEPARAPTRIRVQSLSASEVEVTWKTLPWSTSRRRVLGYELRYWE
KKEKEDMASVLRTVGNRTSAIIQGLKGSSTYYITVRAYNTAGAGPPSTVVNVTTKKPPPS
QPPVKVMWNSSNSKIILNWEQVKALENESEVMGYKVLYKQNRHSRPRVMETNTTSVELSL
PPDEEYIIQIKPFGEGGEGSSSKQIIIPRISGPNAIGSASSVSTLSALSTIALSLTARTS
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
cttatcatttctcttatttctctttctctaacagtggacaatgtcttgcagtctcccatt
atcaccaagcagcctggcagcattgtattcccagtggactccttggagaaaagccaagag
gttgtgtttagttgtgaagctcaaggacagcctccaccattttacaggtggaagctcaat
ggcaccagcattgatccaacgtttgattcgcgatacactctctttggtggaaacctccgc
atcacccagctcaacaaagaccaggactctgggatctaccaatgttttgcctccaactca
tttgggaccatcgtaagccgcaaggccagtcttacctttgcatatttggaaaacttcagg
actcatcgaagaagtgcggtatctgtgagggaaggacagggggtggtgcttctgtgtggc
ccgcctcctcactctggagccttgacgttcagctggatttttaatgaatatccatccttc
gtaaagcaggattcacgaaggttcgtgtctcaggagacagggaacctgtacatcgccaag
gtggagccatctgatgtgggcaactacacatgtgtcgtcaccaatacagtcacaaaaacg
catgtccacggtccgcccactcctctgatactgcgcactgatggtgttatgggagaatat
gaaccaaagattgaagtgcaatttccagaggtggtccaggtggctcaaggtgcaactgtg
aagcttgaatgctttgctttgggcaatcctgtaccttccataatatggaggcgtgtagat
ggtgtcccattctcccgcaaggtggacatgaggaaggccagtggtgtcctcgagatccca
tacttcgagcaggatgatgctggtacatacgagtgtgtcgctgagaactctaaagggagg
aactcagtgcagggcaagctctctttctatgctcctccacagatgattgaaaaaccacag
gacatgcagaaggccattgatgactctctagtgtgggagtgtatggccataggcaggccc
aaaccctcttataggtggatgaagaatggagaaaatttggaacctacagaggaaagggtg
caggtggttaatggcgctctgtctattagtcacttggtaatgtccgatgctggaatctac
caatgcgtggctggaaacaaatatggagaggtgtactcaaatgccgagctcagagtgatt
gccgtggctccagattttggagcaaacctcctgaagagccatattcttgtgaaggaaggg
ggtgacgtgctgattgattgcaggcctaagatgtctccccgaggcctgatcacctggaaa
aaaggcagcgagacactccgagagaatagcagaatgactgttctggagagcggaagtctg
cgaatatccaatgccatgaaatcagatgccggcctctacacatgcgtggcgcgcaaccag
ttcggcgtagcaagcagctcagggacgctgctggtgaaagaggccacgatcatcactacg
gctccctcaacgctggatgttacagtgggtgagagcattgttttgccctgtcaggtgacc
cacgaccattcactggaggtcaagtttacatggttcttcaatgagcagctcatccatttt
ggcagtcatggaggatactttgagaaagttggtagtcattcttctggagacatcatgata
cggaatattcagatgaaacatgcagggaagtacacctgtgcagtgcagaccaaggtggac
agcagctctattgccacagacctgattgtcagaggtccccctggcccccctaccagtatt
catgtcgaagagctcacagattcaacagtctctctctcttggaagcctggtcctgataat
cacagtccaattaacgcctacactatccaggctagaacccccttctcactgggatggcaa
gctgtcaccacagttccagaagaagtcgggggtcgccgtctgacagctacagtaattgag
ctcagcccttgggtggagtatgagtttcgagtggtggcaatcaatgcactgggtacaggt
gagcccagcaaaccctccaagcaagtaaggaccaaggaggcacttcccaaggtcactcca
gctaatgtgagtggaggaggtggaactcgatcagaattagttatcacttgggagcctgtt
cctgaagaacttcagaacggcccaggtttcggctatgtggtggcttttcggccatatggt
gccacagggtggatgcaggctgctgtaccatctccagaggcctccaaatatgtgttcaag
aatgaaagcatccaaccattctccaagttccaggtcaaagttggggtctacaacaacaag
ggtgaagggccttttgggccagttgtcacaatctactcagctgaagaagaacctgccaga
gcacctacacgcatacgagttcagagcctttcagcatcagaggtggaagtgacatggaaa
accctaccatggagtaccagcagaaggcgtgttcttggctatgagttaagatactgggag
aagaaggagaaagaggacatggctagtgtgttaaggacggtgggaaatcggacatcagct
attattcaagggttgaaagggagcagcacatattatattacagtgcgcgcctacaataca
gctggagctggaccaccaagtacagtagtgaatgtgaccactaagaaacctcctcccagt
caacctcctgtaaaggtaatgtggaactcatccaactccaagatcatactgaattgggag
caagtaaaggctttggagaatgaatccgaggtcatgggatataaggttttgtacaagcaa
aacagacacagtcgtcctagagtgatggagaccaacaccacatcagtggaattgtctctg
cctccagatgaagaatacatcattcagatcaagccctttggagaaggaggagagggcagc
agcagcaaacaaatcataatccccagaatatctggtcccaacgcaattggatctgcatcc
agtgtatctactctctcagccctcagcacaatagcgctgtcactcacagcccggacgtcc
ttatga
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