Silurus meridionalis (southern catfish): 124383813
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Entry
124383813 CDS
T08004
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124383813 (rhbdl1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124383813 (rhbdl1)
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S54: Rhomboid family
124383813 (rhbdl1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
124383813
NCBI-ProteinID:
XP_046702092
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Position
4:7441793..7461816
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AA seq
372 aa
AA seq
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MDRSSLFQLIQEQLDPEQTGFIAVENFTSLAEQHELQLDPNKLDMLLALVQSDKHGHVCY
QELIELLSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFMAIVTIVQIVVFMCYGVRLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMKCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLHKQCSWWVLVFSFVTFLLFAIFWNIFA
YELLEVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggataggagctcactgtttcagctcattcaggagcagctggaccccgagcagactggt
ttcattgcggtggagaacttcaccagtctggcggagcagcatgagctgcagctggacccc
aacaagctggacatgctgctggccctcgtccagagtgacaaacacggccatgtctgctac
caggagctcatcgaactgctaagcagtaagcgctccagtagtttccggcgcgccatcgct
aatgggcggcgcactctgcagcgtgagatcctattggacgagacggggcttggtgtgtac
aagcgctttgtacgttacgtggcctacgagatcctgccatgtgagacggacagacgctgg
tactttcatcagaacagactctgtcctccacctgtcttcatggccatcgtcaccatagtg
cagattgtggtgtttatgtgctatggggtgcggctcaacaagtgggttctgcagacgtat
cagcctgacttcatgaagagcccgctggtgtatcatccaggacatcgagcccaagtctgg
agattcttcagctacatgttcatgcatgttgggttagaacagctgggctttaacgcccta
ctccagttgatgattggcgttcctctggagatggtgcacgggattctgagaatcagcctt
ctctatatggccggagtggtggcagggtctctcacagtctccatcactgatatgagagct
ccggtggtcggtggttctggaggagtctatgcactctgctctgcccatctcgccaacgtc
gtcatgaattgggctgggatgaagtgtccgtacaagttactgcggatgatccttgcgctg
gtttgcatgagttcggaggtgggccgagccgtgtggctgcgcttctctccaccgttgcct
tcatctgggccgcagccgagcttcatggcccacctgtcgggcgctgtggtgggaatcagc
atgggcctgcttatcctgcgcagctacgaggaatctttgcacaagcagtgctcatggtgg
gttctagtcttctcctttgtcaccttcctactcttcgccatcttctggaacatcttcgcc
tacgagctgttagaagtccagatcccccctccaccctga
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