Silurus meridionalis (southern catfish): 124383872
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Entry
124383872 CDS
T08004
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124383872 (pcif1)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124383872 (pcif1)
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Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
124383872
NCBI-ProteinID:
XP_046702174
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All DBs
Position
1:complement(13941421..13954970)
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AA seq
736 aa
AA seq
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MTSENHSTIKGDSGMIMSPTGSSAAQAPPLTPSTSKAIQDLPDELVQAGWAKCWSKRENR
PYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPATGDGTGEAGVGNGQRKRRPSEDTSS
GGPNSFKRPKVEIPVTPTTPTIPISPSTPGAKPWNSTLEEKQAQPSTPGPTPTPAAPAPA
PAPYRPSVIYWDLDIQTNAVIKERAPFNYLPPHPEIELQRAQLTTKLRQHYHELCYQREG
IEPPRESFNRWLLERKVMDKGVDPLLPSECEPVISPSMFREVMNDIPIRLSRIKYKEEAR
KLLFKYAEAAKKMIDSRNATPDSRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQC
GPHVTAVAKDSVEGICTKIYHISAEYVRRIRQAHLNLLKECNITVDGAEAAEVHDRLVYC
YPVRLSIPSPPQPRVELHFENDMACLRYKGEMVKVNRGHFNKLELLYRYSCIDDPRFEKF
LSRVWCLIKRYQVMFGSGVNEGSGLQGALPVQVFEALNKQFGVSFECFASPLNCYFKQFC
SAFPDIDGFFGSRGPFLSFSPVSGSFEANPPFCEELMDTMVTHFEELLENSSEPLSFIIF
VPEWRDPPTPALTRMETSRFRRHQMSVTAFEHEYRSGSQHICKREEMYYKAIHGTAVIFL
QNSAGFAKWEPTSERIQELLAAYKISGRSLSSPGPSSSSSSSSGDRDSKPSFERSASVEA
PVGPESSSPAPETSNI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaaaaccacagtactataaagggagactcgggcatgatcatgtccccgact
gggtcctcagccgcccaagcaccgccactcacgccctccaccagcaaagccatccaggac
ctgccagatgagctggttcaggctggatgggcaaaatgctggagcaagagggagaatcgg
ccgtactattttaaccgtttcaccaaccagtcgttgtgggagatgccggtcctggggcag
catgatgtcatctctgatccactgggcctaaatgcagcacctgctacaggcgatggtaca
ggagaggctggagtgggcaatggacaacgtaagaggcgcccgtcagaggatacctcctca
ggtggtcctaacagcttcaagaggccaaaggttgagattcctgtaacgccaaccacccct
acaatccccatatcaccaagcacccctggcgcaaagccctggaactccactttagaagaa
aaacaagcccagcctagcacccctggtccaactcctactcctgctgctcctgctcctgct
ccagccccataccggccttcagttatttactgggatctggacattcagaccaatgcagta
attaaggaacgggctccattcaactacctcccacctcatccggagatcgagctacagcgt
gcacagctcaccaccaaactccgtcagcactaccacgagctgtgttatcagcgtgaaggg
attgagccaccacgggagtcatttaaccgctggctgttggagaggaaggtgatggataaa
ggagtggatcccctgctgcctagcgagtgtgagcctgtgatctcgccctctatgttcagg
gaggtcatgaacgacatccccatcaggctctcgcgcattaaatacaaagaggaggccaga
aagctgctattcaagtatgcagaagctgccaagaaaatgatcgattccagaaacgctacg
ccagacagcagaaaagttgtaaagtggaatgttgaagatacaatgaactggctcaggaga
gaccactctgctagtaaagaagactacatggatcgtctggagcacttgcggaagcagtgc
ggtcctcacgtgacggctgtagccaaggactcggtggaggggatttgcacgaaaatctac
cacatctcggccgagtatgtgcgccgaatacgtcaggcccacctcaacctgctgaaagag
tgtaacatcacagtggacggggcagaggctgcagaagtgcacgaccggttggtgtattgc
tatccagttcgactgtccattccatcgccaccgcagccccgcgttgaactccacttcgag
aacgacatggcctgtctgcgctacaaaggagaaatggtgaaggtcaaccgtggccacttc
aataaactggagctactatacaggtatagctgtattgatgacccaaggttcgagaagttt
ttgtcacgtgtgtggtgccttataaagagataccaggtgatgtttggatctggtgtgaac
gaaggcagcggcctacaaggggcacttcctgtgcaagtgttcgaggcgctcaacaaacag
ttcggagtcagtttcgagtgctttgcctcgccactcaactgctacttcaagcagttctgc
tcagcctttcctgacattgatggtttctttggatctcgagggccatttctaagcttttca
cctgtcagcgggtcatttgaagccaatcctccattctgcgaggagctcatggacaccatg
gtcacacacttcgaagagcttctagagaactctagcgagcctctgtctttcataattttt
gttcccgaatggcgtgacccgccaaccccagcactgacacggatggagaccagtcgcttc
cgcaggcaccaaatgtcagtgacagctttcgagcacgaataccgcagtggctctcagcat
atctgcaaaagagaggagatgtactacaaagccattcacggcacagcggtgatcttccta
cagaacagtgccggttttgccaaatgggagccaaccagcgagagaattcaagagctgctg
gctgcatataagatctctggacgctcactgtcctctcctggaccttcttcctcttcttcc
tccagcagtggagacagagactccaaaccgagctttgagcgctctgcgagcgtggaagcc
cctgtaggccctgaaagtagcagccctgcacctgaaacatcaaacatataa
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