Silurus meridionalis (southern catfish): 124383897
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Entry
124383897 CDS
T08004
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124383897 (cicb)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124383897 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
124383897
NCBI-ProteinID:
XP_046702216
LinkDB
All DBs
Position
4:12499293..12550251
Genome browser
AA seq
2561 aa
AA seq
DB search
MRSLKKQRGRSPLSTRAKSVRKRGDKHDRQSQTTPAAVSSQKNAPSKLDNSEGKTAKRSN
TPNKEGLKGQIKGLSVDVDQAEQIVVRVNKMTTPENTNSKTHNITMTNSITSNSLSTNTA
ANSSDKSNSIITNHSPITLSSRKTATFKARVPKKKYMYEHGTVSPSPITPPVPSLAPNSN
HLGKLSNSITPNSLPLANNVVMKDEDVVKTANINNNVLADYKTSTETSSLRGDVGEVIND
EVPCVTKSLVDQMKTVAFGEVAPNSACSSSTETASEKSPVVEPSNVYQNIGTTLNIPKYP
LNRPLSFDPLLTQNNQQPLQESFSEIAEALAKGLKNQRVLARHQRMKEVKGEEAFSECVF
IRGVVRGATKEQLSIELHIDGEEMQLLLPFNTLVNHPDQTIDLILDAPPPGHDPVDVGTH
VCVPYGEDKGKEWYREGVVSQVDSHPAVACPYRVLLQEENNHKKSGNKQDEKQQRTGIQA
VWVSRQSLRLLVPPWEGEVQKKEEKERREDMDVEREMCQISRGMTMGSSRPPQKNSDIGG
QLYEGTPTSSSTPSPAILMSNSALIIVTGREVAEDTDKERAKERERERKQLQTPEVDLEV
LRLNLAPLQDAVGTLVSRVPKSIRPNDHRQLISKPSGYSSPISVVQGLAGTTLGTHLTIP
ISGSTHQPALSAFVGSNGVPLQPLSTTVLPSPNSKRSLIPLDKTSTPSAPTPGSSASSSA
SSSRSRTPLSAAQQIYKKGDVVCTPNGIRKKFNGKQWRRLCSKDSCMKESQRRGYCSRHL
SMRTKEIEGAGGERELKRGGGSSSGTATPSDLRGGASSEFDWEETSRDSSETSSRGTDSR
PRLVLPSLLPQDFSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPTPSPSPSPL
FGFRPANFSPITTLTVLPSRRHRHTSGTSNSKLSTLVAEKDRERIASGIVPPFQTSLTFT
VPVSPNKHKSDTSQPTALVMQDGTKLELDHSTGDLSVGTSFHVLSPLTTTFSHSKRPTSS
TASSLPPSPLTLESGAQRAVPQQTLRDSPVIVRNPEVPLAKFTECPLVKIADKDGINPKH
DSMTGVLSSAGLQMPVPINGAASTNGAVLLHSPSSTLVLVSSISSLPNSNPTSLTTQSSP
TLACISVPSPAPDSASFGSGGGDQGKCGITKLQQPVPCHPAPTALLPLLLPAETLHPVPC
KDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSTQPSEGQQPVNHSQASTLKK
EAQSGTAVKEVAEGASNPALRPAPSIDDLPPARERERETEKERPDSETESDVDDPFLPGV
LPDPPVSASPGKRRSQSLSALPKDDKNSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHP
NQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSESRN
PPGGKDVRERSMSETTEPPSVPMGVELKGMGPGVVGVSERAGGERIARPRAFSQSAMHSL
ERSERGNPQVLAELAQICGDGAQFSGRGGTHSQVQRGVSEDMTSDEERMVICEEEGDDDV
IEDPYPGSSIDLKCKEKVTDSDSENGSGDEVERKRVFAPVICTSGPGHGRSVSLSSYPSS
RHSSESSIKRKRGLEGGEGERRDADGGTSHLLPLSSSGQSISVSTSSTLGAVRVASTIVT
NVVRPVISTPVPITSKSSQDRKATTPQTQLLIGSGVAGSGATLAPAGGGGYYSSSSPSPA
LGGQAGLNLVLGGTFQAPSAVQLISPPPPQNPASPAIVAPTQSNGPAPLPLLQPHILPTA
LPAPSAGQKAVTQVQYILPTLSANNPKSPSPQQPGQPTSIFTLPTAPPTLASVANGKQSG
YTSGPAVGVVSPGVRVQTQSPVLQGKMLVPMATVRTTPALSQQFPLMAPPLPVQNGAQSG
NKIIQIAPMPVVQSPLSSAGSPFPVTMAAATVVAPPGSTPSQAVLLPPPPTRITYVQSTP
GGPSPIPLVSTATGSTSQTAPPTPGSAYVPSPLATFAAIAHPGQTLVQPLIAGQPPLLAP
PQSPNPAITAIYPSTTVTLSTGVVSGATMPPGVVYTVSSPSILPKHTSTTSVTPTSLPAP
DRTGHGPAHAELDRQPDKLPLSHTDRLTKVGSSSAAPPPGPTLPLQPAGLAQPPLAAAIS
KLPSAPAKPPQKVKATVANIPVGCYDGGGRGKEREKDREREKDREKEKDREKEKESSSCF
SFEVDKSRETTPACLASLDDGSSEAEAHSVGEVGSTSTRSKETNAKEAEWKDSTSSSPLP
PSASEPAPPLPQSDKDSPLPKKLKSRPPPLKRPFDSVDNCVVRRVLSEVYFEERFAELPE
FRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTGERDLDSSTDDPISPKRKSRRRSSCS
SEPNTPKSAAKCEGDIFTFDRPGTDGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQE
HGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAVPSEIAGTSDSISLPGPS
GLAASEGGGGSECAEKEAERDEEQSNCDEPRNAGNSLDSTR
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atgagatctctgaaaaaacagagagggcgctctcctctgtccacacgggcaaaaagtgtg
aggaagagaggcgataaacatgacagacaatcacaaactacacctgctgcagtgtcatcc
cagaaaaatgctccgtccaagttggacaactctgaaggaaagacagccaagaggagcaat
actcccaacaaggaagggctaaaaggacagataaaaggactgtctgtagacgtagaccaa
gccgaacaaattgtagtaagggtcaataaaatgactactcctgaaaatactaactcaaaa
acacataatattaccatgacaaacagtataaccagcaactcactcagcacaaacacggca
gccaacagctccgacaaaagcaactctattataaccaatcatagtcccatcacactctcc
agtaggaaaacagctaccttcaaagccagagtgcctaagaaaaagtatatgtatgaacat
ggaactgtcagcccctctccaatcactcctcctgtaccttcgcttgcacctaatagcaat
cacctcggtaaacttagtaactctattactcctaatagcctccctctagctaataatgtt
gtgatgaaagatgaagatgttgtaaagactgctaacataaacaacaacgttttagcagac
tataaaacaagcacagaaacctcatcactgagaggggatgtgggagaggttatcaacgat
gaagttccatgtgttacaaaaagcctagtggaccagatgaaaacagttgcatttggagag
gttgccccaaactcagcttgctcatcgtccacagaaacagccagtgagaaatctccggtg
gtggagccctctaatgtgtaccaaaatatagggactaccttaaacataccaaaataccca
ttaaacagaccactatcctttgatccactccttacccaaaacaaccaacaacctttgcaa
gaaagtttttcggaaatagctgaggcattggctaaaggactcaagaatcagagggtgcta
gctcgtcatcagagaatgaaggaggtaaaaggagaagaggcatttagcgagtgtgttttt
atccgtggtgtggtgcgtggggctaccaaagagcagctcagtatagaattgcatattgat
ggggaggagatgcaacttttgcttccatttaatacactggtaaatcacccagaccaaaca
atagaccttattttagatgcccctccaccaggccatgatccagtggatgtcgggacacat
gtttgtgtgccttatggagaagataaaggaaaggaatggtatagggaaggagtagtgtca
caggtagattcccatccagctgttgcttgcccatacagagtgctactgcaagaagagaat
aatcacaaaaaatcaggaaacaaacaagatgaaaagcaacagagaactggaattcaggct
gtgtgggtctcccgacagagcctgcgccttcttgtcccaccatgggaaggcgaagtgcaa
aagaaagaagaaaaagaaagaagagaagatatggatgtagagagagagatgtgtcagatt
agtaggggaatgactatgggaagttctaggccacctcagaagaattctgatattggtggt
caactgtatgagggcacaccaacttcttcatctacaccctctccagcaattttgatgtca
aacagtgcactaatcatagtgaccggaagagaggtggctgaagacacagataaagaaaga
gcaaaagaaagagagagagaaagaaaacaactacagactccagaggttgatttggaagtt
ttaaggcttaatctggcacctcttcaagatgcagtaggaactttggtttcaagagtacct
aaatcaatcagacccaatgaccatagacaactcatttctaagccttctggatactcaagt
cccatttctgttgtccaaggtcttgctggcacaaccttgggcacccacttgactattcca
atatctggcagcactcatcaacccgctttgtctgcttttgttggctccaatggagttcct
ttgcaacccctttctacaactgtgctgccctcacctaactcaaaacgttctcttataccc
ttggacaagacctccactccatctgcccctaccccagggagttctgcctcatcgtctgcc
tcctcctcacgatcacgaactccactttctgctgctcagcaaatatataagaaaggtgac
gtggtgtgtacacccaatggtattcgcaaaaaatttaatggaaagcagtggcggcgttta
tgttcaaaggacagttgcatgaaagagtctcaacgtaggggctactgctctcgacatctc
tccatgcgcactaaagagattgaaggtgcaggtggagagcgggagctaaagagaggagga
gggagtagttcaggaactgcaaccccttcagacctgcgaggtggggcgagcagtgagttt
gactgggaggagacatcacgagacagtagtgagaccagcagtcggggaactgactcgcga
ccacgtcttgttcttccatcacttttgccacaggatttttcacggtttgactttgatgaa
tgtgaggctgctaccatgctagtgtctttgggaagttcacgatcagggacgccctcattt
tcccctatatcaaatcagtcacctttctctccgactccctctccctccccttctccactc
tttggttttcgtcctgcaaattttagtcctattacaactttaacagtcttgccttctcgt
cgacacagacataccagtggtactagcaactccaagcttagtaccttagtggcagagaag
gatcgggagagaattgcatctggcattgtaccaccattccaaaccagtttaacctttact
gtacctgtaagtcctaacaagcataaatcagatacctcacaacccactgctcttgttatg
caggatggcaccaaacttgaactggaccatagcacaggagatctctcagtaggcacttcc
tttcatgtactttctcctttaacaaccactttctctcacagtaaaaggcccacctcatcc
acagcttcttcactcccaccttctcctttaaccttagaatcaggggcacaacgtgcagtc
cctcagcagacactgcgagactctccagtaattgtacgaaatcctgaggtaccgttggca
aaatttacagaatgtccactggtaaagattgcagataaagatggtataaatcccaagcat
gacagcatgactggtgttttgtctagtgcaggattacagatgcctgttccaattaatggt
gcagcttccactaatggggccgtcttattgcatagcccttcatcaactttggttctggtg
tcttccatctcttcccttccgaattccaaccctacaagcctcaccactcagtctagccct
accttggcttgcatatctgtgcccagtcctgcccctgattcggcttcctttggttcagga
ggaggagatcaaggaaagtgtggaataacaaaattgcagcagccagttccatgtcatcct
gccccaacagctttgttgccacttttacttcctgcagagactttgcatcctgtgccatgc
aaggacatcattatgggacgaccaggaactgtttggactaatgtggagcctcggtcggtt
ccagtgtttccttggcattcgttggtgccattcctggcacctacccaatcagatccatca
acacagcctagtgaaggccagcagcctgtcaatcattctcaggcgagcactcttaagaaa
gaggcccagagcggcacggcggtgaaggaggtcgcagagggagcatcaaaccctgctttg
cgacctgcgccctctatcgatgaccttcctccggcgagagagcgagagagggagacggag
aaagagaggccagacagtgaaacggagagcgatgttgatgatccgtttttaccaggtgtc
cttccagacccgccagtctcagcatctcctgggaaacgccggtctcagtctctgagcgca
ctgcccaaagatgacaaaaacagccctggcaagagggagaaggatcacatccggaggccc
atgaatgccttcatgatcttcagcaagcgtcaccgcgctctcgttcaccagcggcacccg
aatcaggacaaccgcactgttagcaagatcctgggagagtggtggtacgctttgggaccc
aaagaaaaacagaaatatcacgacttagcattccaggtgaaagaagcgcactttaaggcc
caccccgactggaagtggtgtaataaggacaggaagaagtcgagcagcgagagtcgtaac
ccaccaggcggaaaggatgtcagagagagaagcatgtctgagacgacggagcctccatct
gttcccatgggtgttgagcttaaagggatggggccgggtgtggtaggcgtgtccgagcgt
gctggaggagaaaggattgcacgccctcgcgccttctcgcagagcgccatgcacagcttg
gagagaagcgagagaggcaaccctcaggtgcttgcggagctcgcacagatatgtggggat
ggggcccagttttcaggtcgtgggggaacacattctcaagtccagaggggtgtgagtgaa
gacatgaccagtgatgaggaacgcatggtcatctgtgaagaagagggggatgatgatgtc
attgaggacccttatccaggcagctctattgacctgaagtgtaaggagaaagtgaccgac
agcgacagtgaaaatggatctggggacgaagttgaacgcaagagagtctttgcccctgtg
atctgcacgtcagggcccggtcacgggcgcagcgtatctctttcctcctacccttcctcc
agacactcctcagaatcttccatcaagaggaagcgtgggctagagggaggagagggagag
cgtcgggatgctgacggtggtacgtctcaccttcttccgctgtcttcctctggccagtcc
atttcagtcagcacatcttcaactttgggagcagtaagagtagcatcgaccatagtcact
aacgtggtacgtcctgtcataagtacaccagtgccaataaccagtaaatcgtcccaagac
agaaaagccaccactcctcagacgcagcttcttattggatctggagtggcaggaagcggg
gcaactttggcacctgccggagggggcgggtactattcctcgtcctcgcccagtccggca
cttggaggacaagcgggactaaatctagtcttgggaggcacatttcaggcaccatctgca
gtgcagcttatcagtcctcctcctcctcaaaatccagcatcccccgccatagtcgctcct
acacagagtaatggtcctgcacccttgcctctgctgcagcctcacatcctgcctacagcc
ttgcccgcaccctctgcaggccagaaagcagtaacgcaagtacagtacattctgcccact
ctctctgccaacaaccccaagagcccctcgcctcagcagcccggccaaccaaccagtatc
ttcaccctgcctacagctccgcctacacttgcttcagtggcaaatggaaagcagtcagga
tatacatcaggccctgcagtaggcgtggtcagtccaggagttagagtgcaaacacagtcc
ccagtcttacagggcaagatgctggttcccatggcaactgtgcggaccactcctgccctt
tctcagcagtttcccttgatggctccgcctcttcctgtgcagaatggagctcagtcagga
aacaagatcatacagattgcccctatgcctgtcgtgcagtccccgctttcttctgcaggg
agtccattccctgtaaccatggcagcagccacagtggttgcccccccaggctctaccccc
tcacaagctgtgctgctgcctcccccacccacgagaatcacttatgtccagtccactcca
ggagggccctcccctatcccacttgtttccacagcaacaggctccacctcacaaacggcc
cccccaacacccggatcagcatatgtgccgtctcctttggccacctttgcggcgattgct
catccgggacagacactagtgcagccacttattgctggtcagccaccattgttagcaccg
ccccagtctcccaacccagcaatcaccgccatctacccctctactacggtcactctgtcc
accggggtggtgtctggagcaacaatgccacccggcgtggtttatacggtctcaagcccc
tccatccttcccaaacacacttccaccacttccgtgacacctacgtcccttccggcccct
gacaggacgggtcacggtcctgcacacgctgagctggacagacagcccgataaactgcct
ctctctcacaccgacaggctgactaaagtcggcagcagctcggcagctccaccgcctggc
ccgacattgcctctacagcctgctggtttagctcagcccccactcgcagctgccatttca
aaacttccctcagcccctgccaagcctccacagaaggtcaaggccaccgtggccaacatt
cctgtcggctgctacgatggaggagggagagggaaagaaagagagaaagaccgggagaga
gagaaagaccgggagaaagagaaggaccgggaaaaggagaaggagagcagcagttgtttc
tcatttgaggtggataaatctagagaaacgactccagcttgtctcgcctcgctagacgat
ggctcttcggaagctgaagctcatagcgtcggtgaagtgggttccacaagcacacgcagc
aaagagaccaatgctaaagaggctgaatggaaagactctacttcctcttctccattacct
ccgtctgcatcagagcctgccccaccccttcctcagtcagacaaagattctccacttcct
aaaaagctcaagtcccgccccccgccactgaagcgcccattcgactcagttgacaactgc
gttgtgcgcagagtcctatcagaggtgtactttgaggagcgttttgctgaactgccagag
tttcgtcccgaagaggtgcttccatcgccgaccctgcagagcctggccacctctccacgc
gccatcctgggcagctaccgcaggaagaggaagaactcgactggtgagagagatttagac
tcctccacggacgacccgatctcgccgaagagaaagagccggcgcaggtcgagctgcagc
tcagaacccaacacacccaaaagtgctgccaagtgtgagggtgatatatttacctttgac
aggccaggtacagacggggaggacattctgggggagctggagtttgataaggtgccatat
tcctctctgagaagaactctggatcagaggagagctcttgtcatgcagctattccaggag
catggtttcttcccttcagcccaggccactgctgcattccaggcacgatatgctgatatc
ttccctaccaaggtgtgcttgcagttaaagatccgcgaggtccggcaaaagatcatgcaa
acggctgtgcctagtgaaattgcagggacctccgactccatctctttaccgggcccgtct
gggctggcggccagtgagggaggaggcgggtctgagtgtgcagaaaaagaggcggagcga
gacgaggagcaaagcaactgcgatgagcccaggaacgcaggcaattcactggactccacc
agatga
DBGET
integrated database retrieval system
