Silurus meridionalis (southern catfish): 124383963
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Entry
124383963 CDS
T08004
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
smeo
Silurus meridionalis (southern catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
124383963
NCBI-ProteinID:
XP_046702318
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All DBs
Position
4:19542102..19666113
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AA seq
1057 aa
AA seq
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MRLVLGLRPLLALTFILTGLLLLSNVVTPFPQDLEPISIVGSEYSYLYPGFQGNMSDNDT
ARLGLDFQRMLRINHMLYIAARDHVFVVNLSTSTEQIVPQQKLTWKTKDVDKCTVRGKNS
DECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMATLEQVGEEVVGQARCPFESRQSNV
GLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVY
FFFSEIAVEYTTLGKVVFSRVGRVCKNDNGGSPRVLEKYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIERVFSGKFKEQKTSESAW
TPVPDEQVPKPRPGSCAGDGSAAVYKSSTSFPDETLTFIKSYPLMDEAVPSVNGRPCFTR
TTSRFKLTQLAVDTAAGPYKNHTVLFLGSENGHIQKILASMHPNSTYSTQLLEDIDVYNP
NKCNIRGEDRRILGLELDKDHHALFVAFSSCVVRVPLSRCADYGTCKKSCLSSRDPYCIW
LKTGSCATVAPGLKSGFEQDVENGFSQFPDSCHDVLATTRKQNPALDSAYGKTSPTSASP
TIQGPALPKGPSVSEKGTHPAEGKRGGQGSPGLEPISVEMEGVRRPPEVDKSNHSVHYTL
LIACVLVAFVLGAFLSGFLVSCYCNYNVNKTKRLAKDPEAPIPHALSLRSLAKLNGLLEN
QGKDEKLEVSSPKLYNAFFQNGKDHSGRRHGHHGVMAELIHPHHHHSSELSGLPTPDSTP
ELPIKSMKAFKNQWEKNQNCNNAKEPKSHNMAGSRPSSGIPQQVFPFTHGLASRQPLSGS
VHLEERKIHNSERVPSQPQHCYPHKIVDVTSLDELLKHIHEINVATGKSPTVLTSSISAN
SGQMAFANRVQPQIPETESAPYYSSSTLPRDSLTRRMDVPPEMPSQHQSTLERVSRHASQ
RHSLMSAGGAVCREPSFSRRSHHPPLLARVNSTGGCDARHPLIPNGYLTRQHSYSEQPEL
QRGAVVRRTASLKPDVPPKPLFIPATSPVNQAGKFNY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcggttggttttggggttgcggcccctcctggccctgacctttatccttactggcctg
ttactgctgtccaatgttgtcacaccctttccccaggacctggagccaatcagcatagtc
gggagtgaatactcctacctgtaccctggtttccagggcaacatgtcagataatgacaca
gcgaggctcggtctggacttccagagaatgttgcgtataaaccacatgctgtacattgct
gccagggatcacgtctttgtcgtcaatcttagtacttcgactgagcaaatcgtccctcag
cagaaactgacatggaagacaaaggatgtagataaatgcacagtgaggggcaagaacagc
gatgagtgctacaactacatcaaagtgctggtgcctcgtaatgatgaaacactgtttgca
tgtgggaccaacgcgttcaaccccacctgtcgcaactacaagatggccactctggagcag
gttggagaggaggtggttggtcaggcgcggtgcccttttgaatcgcgccaatccaacgtt
ggcctgtttgctggtggtgatttttactcagcaacaatgacagattttttagccagtgat
gcagtgatctaccgaagtttgggggaaagtagtccagtcctgcgaaccgtgaagtacgac
tctaaatggctgcgagagcctcattttcttcatgcaattgagtatgggaactatgtgtac
tttttcttcagtgagattgcagtggagtacacaactcttggcaaggtggtgttttccagg
gtgggtcgggtgtgcaagaatgataatggaggttctcctagggttctggagaagtactgg
acatcatttcttaaagcccggctgaactgttctgttcctggcgattcgttcttctacttt
gatgttctgcaatccttaacaaatgtgatgcagattaaccacaggcctgctgtgctggga
gttttcaccacacaggccaacagtatcactggctccgctgtttgtgctttctacatggac
gacattgagcgagtgtttagtggcaagtttaaagaacagaagaccagtgagtcggcctgg
acccctgtacctgatgagcaagtacccaaacccaggccaggttcctgtgctggagatggt
tctgcggcagtgtacaagtcctcgacttcctttcccgatgagactctcacctttatcaag
tcttatccgctcatggacgaagctgtgccttcagtgaacgggcggccatgcttcacgaga
actacgagcagatttaagttgacccagttagcagtggatacggccgctggaccttacaag
aaccacacggtcctgttcctgggttcggaaaacgggcacattcagaagatcctcgccagc
atgcaccctaactccacctacagcacccaactcctggaagacattgacgtgtacaacccg
aacaaatgcaatatacgtggggaagaccggaggattctgggactggagctggataaggac
catcatgccctgtttgtggccttctctagctgtgtggtacgtgtacctctgagtcgatgt
gctgactacggaacctgcaagaaaagctgtttgtcctcacgagacccttactgtatttgg
ctgaagacgggaagttgtgccactgtggcgccaggactaaaatcagggtttgagcaggat
gtggagaatggcttctcgcagtttcccgacagctgccacgatgtcttggcaaccactcga
aagcagaaccctgcactggattcagcgtacggaaagacctcacccacaagcgccagccca
accattcagggaccagctctgcctaaagggccaagtgtctctgaaaaaggtacccaccct
gcggaggggaagcggggagggcagggctcccctggcttggagccaatcagtgtggagatg
gagggagtccgtcgtcctcctgaagttgacaagtctaaccacagtgttcattacactctg
ctaatagcatgtgtgcttgtggcatttgtcttgggtgccttcctctctgggttccttgtg
tcctgttactgcaactacaatgttaacaagactaagagactggccaaggacccggaggct
cctatccctcatgctctgtctctgcgaagtctggctaagctgaatggccttctggaaaac
cagggcaaggatgagaagctggaggtatcttctccaaagctatataatgccttctttcaa
aatgggaaggatcattcagggcggagacatggccaccatggtgttatggcagagctgata
catccgcatcaccaccactcttctgagctgtctgggcttccaacccctgattcgacacct
gaactgccaatcaagagcatgaaggccttcaagaaccagtgggagaagaatcaaaattgt
aacaatgccaaagagcccaagtctcacaatatggctggctctaggcctagctctggaatt
cctcagcaggtctttccatttacccatggtctggctagccgacagcctttgagtgggtct
gtgcatctggaagagcgcaagatacacaactctgagcgtgtcccaagtcagccacaacac
tgctacccacacaagattgtggatgtgacctcacttgatgagctcctcaagcacattcat
gagattaatgttgcgactggaaagagccccactgtgcttacctcatccatatccgctaac
tcgggccagatggcatttgccaaccgcgtgcagccacagatccctgaaacagagtcagct
ccctactatagctcctccaccctgcccagagacagcctgacacgtcgcatggatgtgcca
ccagagatgccctcccagcaccagtctacactggagagggtttcacgtcatgcctcccag
cgccattcgctcatgtcagctggaggagccgtttgccgagaaccaagctttagccgtcgc
tcacaccatcccccacttcttgcccgggtcaactctaccggaggctgcgatgcacgtcac
ccactcatacccaatggctacctgacacgtcagcacagctacagcgagcagcctgagctc
cagcgtggagctgtggtacgtcgcacagcctcactaaaacctgatgtccctcctaaacca
ctctttattcctgccacctcacctgtaaatcaggctgggaagttcaactactga
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