Silurus meridionalis (southern catfish): 124383976
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Entry
124383976 CDS
T08004
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124383976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124383976
03036 Chromosome and associated proteins [BR:
smeo03036
]
124383976
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
124383976
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124383976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
AT_hook
Motif
Other DBs
NCBI-GeneID:
124383976
NCBI-ProteinID:
XP_046702353
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All DBs
Position
4:complement(28637679..28709087)
Genome browser
AA seq
701 aa
AA seq
DB search
MADFGAIRHPDLECDWNGSRCANSLIGWIRVYRSLMMQGEDRKKRKQILNPRSVSDEYCL
RERPKEDATKMKNKLSTSVAVNSKKRPWSWDQYIDEERAIAAPVKLFTEYQSAPYGKNGF
KMGMRLEGIDPLHSSMFCVLSVAEVIGYRLRLHIDGYSECYDFWVNADSPDIRPAGWCES
TGRKLHPPKGYKMDEFNWEQYLESCNAQAAPKNLFKSQNNTSTASKFEVGMKLEAVDRKN
PCLVCVASVADIVDNRFLVHFDNWDDTYDYWCDATSPHIHPVGWCQDHGRPLTAPQGHPN
PEHFIWEEYLEDNGASAVPSQAFCMRAPHGFQNNMKLEVVDRRNPMLIRVASIVDTEDYR
VKVHFDGWHSKFDFWVDSDLPDLHPVGWCARTGHPLEPPFTNPGPSDLKSSMTQGVCPTP
GCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEVVLPDRLGGEKQITFVPVQFVQKTKRLC
AEQEEEEVVNDKDSHEESREELSGCDSAPRPRGRPPGHATIKREYKEEPSSQGQKAYSPV
GKRNRLTRIAQSTKYLRIKDEEEEIELNSVIAEKNVDSLQQALHQSVFLSAMSAQPGRDL
PLCWEQHCKLLPGVAGVQASRVAHWTVEEVADFIHSLPGCEEQAKQFREEQIDGKAFLLL
TQRDIVKIMSVKLGPALKIYNSILMFKHAEDSQSASSDTNT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttggagcgattcggcatccggacttagaatgtgattggaatgggagtcgg
tgcgccaattccctgatagggtggattagagtctatcgttccctaatgatgcagggagag
gacagaaagaaaaggaaacagattttgaatcctagaagtgtgtcagacgaatactgtctc
cgagaacgtccaaaagaagacgcgacaaagatgaaaaataagctgtccacttcagtcgca
gttaacagtaagaagaggccctggtcatgggatcagtacatagatgaggaaagagccatt
gcagccccggtgaaactctttactgagtaccagtcagctccttatggcaagaatggcttt
aaaatgggaatgaggctcgagggaatcgaccccttgcattcttctatgttctgtgtgctc
tctgtggctgaggtgattggttaccgtctgcgtctgcacatcgatggttactcagagtgc
tatgacttctgggttaatgctgattcccctgatatccggccagccggatggtgcgagtcc
acgggtcgcaagctacatcctccaaaaggttataaaatggatgagtttaactgggaacaa
tacttggagtcttgcaatgctcaggctgcaccaaagaatctgttcaaatcccaaaacaat
actagcaccgcctcgaaatttgaagtgggcatgaagctggaggcagtagacagaaagaac
ccctgcctggtgtgtgtggcaagtgtggccgacatcgttgataaccgctttctggttcac
tttgacaactgggacgacacatacgattactggtgtgatgccactagtccccatatccac
cctgtgggctggtgccaggaccatggacgacctctaacagcacctcagggacacccgaat
ccagagcatttcatatgggaggagtatttggaagacaatggcgcttctgcagttccgagc
caagccttttgtatgagagcccctcatggatttcagaacaacatgaagttagaggtggtg
gacagaagaaaccccatgctgatccgtgtggcctccattgttgatactgaagactacaga
gtcaaggtgcactttgatggctggcactctaagtttgacttctgggtcgactctgacctg
ccagaccttcatcctgtaggctggtgtgcacggacaggtcaccccctggaacctcccttt
acaaatccaggaccttctgacctcaagagctccatgacgcagggagtgtgtccaacccca
gggtgtaggggagtgggccacatcaagggcgcaaaatacacaggacaccacagtgccttc
ggctgtccctactcggacattaacatgaagaaggaggtagtgctgcccgatcggctcggc
ggcgaaaagcaaatcaccttcgtcccagtgcagtttgtgcagaaaaccaagaggctgtgt
gccgagcaagaggaggaggaggtggtgaacgacaaagacagccatgaggagagcagggaa
gagctgtcaggctgtgactcggcgcctcgtcctcgtggtcggcctcctggccatgccaca
ataaaaagagagtacaaggaggaaccttcatctcagggacagaaggcgtactcaccagta
gggaagaggaatcgtctaaccaggattgcacagtcaacaaaatatctgcgcatcaaagat
gaggaggaggagattgagcttaacagtgtgattgcagagaaaaatgtggacagtctccag
caggccctgcatcagtcagtcttcctgtcagccatgtctgctcagcctggtcgtgacttg
ccactatgctgggagcagcactgtaagctccttcccggtgtggccggggtgcaggcaagt
cgtgtcgcccactggaccgttgaggaggttgctgacttcatccactctctcccaggctgt
gaggaacaagccaagcagtttagagaggagcaaatcgacggcaaggcgttcctcctcctc
acacagcgggacattgtgaagatcatgagtgttaagcttggccctgctctcaaaatctac
aattccatccttatgttcaagcacgctgaagacagccaatcggcaagcagcgacaccaat
acatga
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