Silurus meridionalis (southern catfish): 124384023
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Entry
124384023 CDS
T08004
Symbol
pdcd6
Name
(RefSeq) programmed cell death protein 6 isoform X1
KO
K23902
programmed cell death protein 6
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smeo02044
]
124384023 (pdcd6)
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124384023 (pdcd6)
Secretion system [BR:
smeo02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
124384023 (pdcd6)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
124384023 (pdcd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
DUF5580_M
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
124384023
NCBI-ProteinID:
XP_046702429
LinkDB
All DBs
Position
4:complement(7012273..7016830)
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AA seq
235 aa
AA seq
DB search
MGAGHRPVSAYVISSGGGVASCPRPCVENVTGESETRVREILHLLWVCEKMAYHNQYRAP
QYNSAPPDQAFLWNIFQRVDKDRSGSISDTELQQALSNGTWTPFNPVTVRSIIAMFDRDN
KGGVNFNEFAGVWKYITDWQNIFRTYDRDNSGFIDKTELKQALTGFGYRLSDQFYNTLIE
KFDRQRKGQVAFDDFIQCCIVLQRLTDVFRRYDTDQDGWIQVSYEQYLSMVFNIV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgggacatcgccctgtcagtgcatatgtcataagcagcggtggaggtgtggct
tcatgtccacgcccctgcgtggagaatgtgacgggggagagcgagacacgagtccgggag
atccttcatttgctgtgggtttgtgaaaaaatggcgtaccataaccagtaccgagctcct
cagtacaacagcgcgcctccagaccaggcgtttctctggaacatcttccagcgggtggac
aaagacaggagcgggtccatctcagatacagagctccagcaggctttatcaaacggcaca
tggacaccattcaatcctgtgactgtcagatcgattatagccatgtttgacagagacaat
aaaggcggcgtgaactttaacgagttcgccggcgtgtggaaatacatcaccgactggcag
aacatcttccgcacctacgaccgtgacaactcaggcttcatcgacaagaccgagctgaag
caggctctcaccggcttcggttaccgtctctcagaccagttctataacacgctgatcgag
aaatttgaccggcagaggaaaggacaggtagctttcgatgacttcatccagtgctgcatt
gtactacagaggctaaccgacgtgttccggagatacgacacggaccaggacggctggatc
caggtctcctacgagcagtacctctcgatggtcttcaacatcgtatag
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