Silurus meridionalis (southern catfish): 124384026
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Entry
124384026 CDS
T08004
Symbol
cdk13
Name
(RefSeq) cyclin-dependent kinase 13
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124384026 (cdk13)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124384026 (cdk13)
2.7.11.23 [RNA-polymerase]-subunit kinase
124384026 (cdk13)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: CMGC group
CDK family
124384026 (cdk13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
124384026
NCBI-ProteinID:
XP_046702433
LinkDB
All DBs
Position
4:31576178..31591500
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AA seq
1354 aa
AA seq
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MPNPEISHDARGRSPSAQRNRRHERRRKAPGSTGASENAARRERHRDVERRASASRRKRR
NKHGREREARRSPAKLDGNVHGLAVEYDDVSSQSERFSASPSPRAEQWSELAELRDSDVT
PVRKTRREPDSSGGRQDRDPKLKEKKTEREKDALSRSRDQTRNHDSNGKKSSADNKREAK
RHKSRTKSEKETPSAYRDTPQAYRDERDELRSYRRSPGCNKTESPYSSYQYGYQSPSYNQ
FSNYGSKKQSPSSTYYGRDADSYGGYSATKSPSAKRKRSPGSPYAWRRTPSPYEAWEHTS
SPYSRKRSRSPYKKSVSPSPEQRRPAKSRSRSPYTSSRRSRSRSRHRHSRSHSRPSSLSP
STLTFKSSLAAELSKQKRAKAAEAARAKSSSNASTPTKGSSSSSTAPQPSPITNHTVKKT
RPPSPPPPAIEKGPKSPASNQPQSPVDKTTKSSSEVPPSVRVKEEKRKGQAAQGKEKEKT
NAPVSSLSSLPLPNLLDHIDGTDSLKNSTLSGKKKPEKKTRHLLADLPLPPELLGSTLGS
PHSPPEEKKTATLRRRPKICGPRFGEIKETEIDWGKRCVDKFEIIGITGEGTYGQVYKAK
DKDTAEMVALKKVRLDNEKEGFPITAIREIKILRQLNHKSIINMKEIVTDKEDALDFKND
KGAFYLVFEYMDHDLMGLLESGLVHFNESHIKSFMRQLLEGLDYCHKKNFLHRDIKCSNI
LLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCI
LGELFTKKPIFQANQELAQLELISRICGSPCPAAWPDVIKLPYFNTMKPKKQYRRRLREE
FAFIPLTALDLFDHMLALDPSKRCTAEQALLSDFLRDVDPTKMPPPDLPLWQDCHELWSK
KRRRQKQMPEELAAPKVPRKELGLDDSRSNTPQGFPSAGGHKGPSATAAAMLDPKGPTSQ
LTQEQLAVLLNLLQSKSTPAGPLQLSQAAGLKLNSEALQHLAKALLPGAAEPERPPEPPV
PAQSQSKAPKPPLPLPAVGGAPRTPPLPKPPSPPTPQQQGKHDGDVSATATQTAVTMLLA
QFLKVQQGAEVLGTEGADTTVSTAAGTAAAPLPPTEIKLPPEPSPVSPATEGNGSSSRAP
EPISILPPDQRPPEPPEPPPCADLDYRQAPESQTLLSSSCSTSASLGEAARPPEPEYPPP
PPPRSHLPPPPFPPTGFGESYLSHMIGGGIPPHAHAHATSSAPVPFPHGAAPGGSTSGVS
AGASGSMVFSGDKDHRFEYNHSPIPIEGTSHPSSIHLYNPAIGQKDGGAPPPSVPPPPPG
QVWGSPSQSGAPPLPLGYVPHLNTAALRGRGLPY
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatccggagatttcgcacgacgcccggggccggagcccttcggcacaaaggaac
cgccgacacgagaggcggaggaaagctccagggagcaccggcgctagcgagaacgccgcc
cgacgcgagaggcaccgggacgtggagcggcgcgcgtcggcgtcgcgacgcaagaggcgc
aacaagcacggcagggagcgggaagcgcggcgctcgcccgccaagctggacgggaacgtc
cacgggctggcggtggagtacgacgacgtgagttcgcagtcggagcgtttctcggccagc
ccctcgcctagagcggagcagtggtccgagctggccgagttgcgagacagcgacgtgacg
ccggtaagaaaaacgcgccgtgagcccgactcctcggggggccgacaggacagggacccg
aaactcaaggagaaaaaaacggagcgtgagaaggacgcactgtccaggtcgcgggatcag
accaggaaccacgacagcaacggcaaaaagtcgtctgcggacaacaaacgcgaggccaag
cggcacaagagccgaaccaagtcggaaaaagagaccccgtccgcgtaccgagacacgccg
caggcctaccgggacgagcgcgacgagctccggtcctaccgcagaagccctggctgtaat
aaaaccgagagtccgtactcgtcgtaccagtacggataccagtctccgagctacaaccag
ttttcgaactacgggagtaagaaacagtcaccgagctcgacctactacgggcgggatgcg
gactcgtacggcggctacagcgcgaccaagtcgccttcggccaaacggaagcgctcgccg
gggagcccgtacgcgtggcgtcgcaccccgagtccatacgaagcgtgggagcacacttcc
agcccgtacagccgaaaacgctcccggagcccgtacaagaaatcagtcagccccagtcca
gagcagaggcgtccggcgaaatcgcgatcacgcagcccatacacgtcatcacggcgttca
cgttctcgtagtcgtcaccgtcattcacgttctcactcgcgaccctccagcctttcaccc
agcacccttacgttcaaaagcagcctggctgctgagctcagcaagcagaagagggcgaag
gctgctgaggctgcacgtgccaagagctccagcaatgcatcaacaccaaccaagggctca
tcatcctcttccaccgcaccccagccaagccccatcaccaatcacacagtgaagaaaaca
cggcccccgtctccccctccgccggcaattgaaaaaggccccaaaagccctgcatcaaat
cagccacagtcccctgtcgacaagaccaccaaaagcagctcagaggtgcctccgtctgtc
agggtgaaggaggagaagaggaaaggacaagctgctcaagggaaggagaaggaaaaaaca
aatgccccagtgtcctcactgtcatctttgcctctgcccaaccttttagaccacatagat
ggaactgatagcttgaagaactctacactctcagggaagaagaaaccagaaaagaaaaca
cgccacctcctggctgatctcccgctccctcctgaactcctcggcagtacgctcggttca
cctcatagcccaccagaggagaaaaagaccgccacgttaagaaggagaccaaaaatatgt
ggcccacgcttcggtgagattaaggagacggagatcgattggggaaagcgatgtgtggac
aagtttgaaatcattgggatcactggagaaggtacctatggacaagtgtacaaagccaag
gataaagatacagctgagatggtggctctgaaaaaagtgcgattagacaacgagaaagag
ggctttcccatcacggctatcagggagatcaagatcctgcggcagctcaaccacaaaagc
atcatcaatatgaaggagattgtcacagataaagaagatgctctggacttcaagaacgat
aaaggggcattttacttggtgtttgagtatatggaccatgacttgatggggcttttggag
tctggcctagtccattttaacgagagccacatcaaatccttcatgcggcagttgctggaa
ggtctggattactgccacaagaagaactttctgcaccgagacatcaagtgctccaacatt
ctgctcaataacaagggccagataaagctggcggattttggattggctcgactctacaac
tccgaggaaagtcggccctacaccaataaggtgatcactctgtggtaccgtccacctgag
cttctgcttggggaagagcgatacacaccagccattgatgtgtggagctgcgggtgcatt
ctgggtgaactcttcaccaagaaacctatttttcaagccaaccaagaactggcacagtta
gagctaattagccgtatctgtggcagtccttgtcccgctgcgtggcccgacgtcatcaaa
ctgccgtacttcaacaccatgaaaccaaagaaacagtacagacgcaggctccgtgaagag
tttgcttttattcctctaacagccctggacctgtttgatcacatgctggctctggatcct
agtaagcgttgtaccgcagaacaggcgctcctcagcgacttcctcagagatgtggaccca
actaagatgcctccaccagatctccctctgtggcaggattgtcacgagctgtggagcaaa
aaacgtcggcggcagaagcagatgccagaagaactcgctgctccaaaagttccacggaaa
gagctgggactagacgacagccgcagtaacacgcctcagggtttcccttctgctggagga
cacaaagggcccagtgccactgcggctgccatgctggaccccaaaggccctacttcccag
ctgacccaggagcagttggcagtacttttaaacttgctccagtctaagagcaccccagcg
ggacctctgcagctctcccaggccgcgggcctcaagttaaactcagaagcactgcagcac
ctagcgaaggctcttctcccaggggcagctgagccagagagaccaccagaacctcctgtt
cctgcccagtcgcagtccaaagcccccaaacccccactccctcttccagcagtgggcggg
gcacctcgaaccccaccgcttcccaagcctccatcaccccccactcctcagcagcagggt
aaacacgatggagacgtctctgccacagctacgcaaacagccgttactatgctgctcgct
cagtttctcaaggtccagcagggggcagaagtgctcggaacagagggggcggatacaacc
gtttcgacagcggcagggacggctgctgcaccgctcccccccacagagataaaactgcca
ccagagcctagccctgtctcaccagcgactgaggggaacggatcatcctccagagctcct
gagcctatctccattttgcctcctgatcagaggccaccagaacccccagaacctcctccg
tgtgcagacctggactatcggcaagcccctgaaagccagactctcctctcctcttcctgt
tccacttccgcatctttaggagaagcggcacggccgcctgagcctgaatatcctcctcct
cctccaccaagaagccacttgcctcctccaccctttcccccaacaggcttcggagaaagc
tacctcagccacatgataggtggaggaataccccctcatgcgcatgcccacgccacatcc
tctgccccagtgcccttccctcatggagcagcaccgggtggcagcacgagtggagtttct
gcaggagccagtggcagcatggtatttagtggagacaaggaccatcgcttcgagtataat
catagtccaatacccatagagggcacctcccacccctctagtatacatctctacaaccct
gctattgggcagaaggacggaggagcgccacctccttcagttccgccacctcccccaggc
caagtgtggggctccccatcacagtctggggctccaccccttcctcttgggtacgtcccc
catttgaatactgcagcactacggggcagaggacttccatattga
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