Silurus meridionalis (southern catfish): 124384027
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Entry
124384027 CDS
T08004
Symbol
zgc:111976
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124384027 (zgc:111976)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
124384027 (zgc:111976)
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Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
124384027
NCBI-ProteinID:
XP_046702434
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Position
4:complement(31542234..31558190)
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AA seq
594 aa
AA seq
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MESKVDVLQKTYLSRLNSKFAEKPWRETFQLVHRCMGKSRTDSQHCEPIMKCLQKLQKAL
NVTSLHAIVTRLETIAKQRGLGSHLSPTETACYLTADLFYVEVLMMPGGEVKDVKFAQHG
EAPESNASLCQLLRMKKFEEFSLKMDDFVSLYNIPGDSDTKLKLYTSLQHLQKDLLKISN
LPRRLIDSDLHVDMVLNGRIGSITLGREGSPMSIEYYISPSDALMKRLHKGESGHSQTAV
VGVGASATTHKLQMESLIPTPPQIDSLGLPLFIPLSETCSEILPAFFLLKIKPPVPMLNS
FIQKISQITDIPPDFDLQGEPLFQLFQSSTLEDKTPYEGKDAQFIVSLPDAEFHSYLFAV
AEWECDFWKGSLVHTVPFTHPAHVPVLLDLLRYQSVINTLLSSCITSLKHQPELACDVSC
EIFPESVCSFSVTFSIPDTDTLAVLLVSVVDYRQLHCRLLIPGTVDHSLDDYISRVLTRC
MSIPITLRAIRKRISSLKPPALPLEPEPARKIERLSSTPPHCAAKNTSAILPSTVLSPEP
MEADSLLLILATMLCLLLLLQQLMVLIQIRLLTVPPVPLWVSFHTGWPATFQLS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaaagtggatgtcctgcagaaaacctatttatcaagattaaactccaaattt
gcagaaaaaccatggcgtgagacctttcagctggtgcacagatgcatggggaaatctaga
acagacagccagcactgtgagccaattatgaaatgcctgcagaaactacagaaagctctg
aatgtgacctctctgcatgccattgtgacccgactagagacgattgctaaacagagaggg
ctgggctctcacttgagtcccacagagactgcatgctatctgacagctgatctgttctat
gtggaggtgctgatgatgcctgggggagaggttaaggatgtgaaattcgcacagcacgga
gaagctcctgagtcaaatgcatcactttgtcagttgctcaggatgaagaaatttgaggaa
ttctcactcaagatggacgacttcgtgtctctttataatataccaggcgacagtgatacc
aagctgaaattgtacacatcccttcagcatctgcagaaagacctattgaaaatttctaat
ttaccaaggcgtttgatagatagtgatcttcatgtcgatatggttctaaatggcagaatt
gggagtattacgcttggcagagaaggaagcccaatgagcattgagtactacatcagcccc
tcagacgcactgatgaagaggttacacaaaggggaaagcggccacagccagactgccgta
gtgggggtaggtgccagtgccactacacacaagttgcagatggagtctctgattcccaca
ccaccccaaatagactcattaggacttccgttgttcatcccgctgtccgaaacctgttca
gagatcctgccagccttctttcttctcaaaatcaagccaccagtgcccatgctcaattcc
ttcatccagaagataagtcaaataacagacattcccccagattttgacctgcagggggag
ccactgttccagttgttccagtccagtactttagaggacaaaacaccatatgaaggaaaa
gacgctcaatttattgtgtctctcccagatgctgagttccacagctatttgtttgctgtt
gctgaatgggagtgtgacttctggaaaggatctctggttcacactgttccttttacccat
cctgctcacgtaccggtcttattggacctcctccggtatcagtctgtcatcaacactcta
ctttcgagctgcattaccagccttaagcaccaaccagagttagcatgtgacgttagctgt
gaaatcttcccggagtctgtctgcagcttttctgtgaccttcagcatcccagacacagac
acactggcagttttgctcgtttctgtggtggattatcgtcagctgcactgcagactccta
attcctggaacagtggatcactctctagatgactatatctccagagtcctcacacggtgc
atgtctatccccattactttaagagctatacggaagaggatctccagcttgaagccacca
gcactaccacttgaacctgaacctgctaggaagattgagaggttatcctctacaccacca
cattgtgctgcaaagaacacttcagccatcctgccttctacagtgctctctcctgagcct
atggaggcggacagtcttcttctaatcctggccactatgttatgtctgttgctgctgctc
cagcagttgatggtgctaatacagatacgattgctaaccgttccccctgtgcctctgtgg
gtgtcttttcacactgggtggccagcaactttccagctgagctga
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