Silurus meridionalis (southern catfish): 124384054
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Entry
124384054 CDS
T08004
Symbol
agap3
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124384054 (agap3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124384054 (agap3)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
124384054 (agap3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
Ank
PH
Ank_4
Ank_3
Ank_5
Roc
Motif
Other DBs
NCBI-GeneID:
124384054
NCBI-ProteinID:
XP_046702523
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All DBs
Position
4:complement(7900274..8008010)
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AA seq
1205 aa
AA seq
DB search
MRTDRFPALLQDCSQQRFSGTDINSASNKRTQWIKDFNPASKVGCIPETEYCNGEVTADC
PVVVLRRSTLEVRHVGSSRKTVSMYGSLDEPQQQGYTTVGHEYRSQRPHSVCMLAAAKSS
SVLVTHSSSGKERYSDRLQERRCNRALDGLKQDMPPSFRLPSYSQQEVLPRRTLQTSGKP
RPVSMTVLELKESIRPEDELANRTFSDAASLPRSGFRWRLFGRQAQDKEAVLAPTSTKPD
RPKKRFSSLRRSLSLRLKRNCNPPEQDAVRERTWTTNARDVARPNQPFSYLTGRTLSSAY
EHSEHQRGKQVIEFQTRGKVSVIEVPLAPPKLTKPFKPTSSEPNFWQLITSRFKRKSNKS
EACAESQQSGTGPPAWNKKPQPVTIETLKGIDFSKGQDSFVNSQEWTLSRSVPELKVGIV
GNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWV
DAVVFVFSLEDEISFQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISATNPRVIDDARARK
LSNDLKRSTYYETCSTYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHTSVPA
AAIPSVHLNQATNGGGVPFSDYSSSVPSTPSMGQREMRIETIAASNTPTPIRKQSKRRSN
IFTSRKASEQAKSSECKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGVLT
YHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVATVAPTASPKSNGLTKDRSALQLGI
GATGASHSNSSTSLQSGGVSSGLGVVSGGGAKEGMHQRSFSVSSAEQWNEAVNTSSTSAN
GTLDSLSAATGLGGPTSPKLEPPPSPHANRKKHRRKKSTGITKPDGLSAGTEEQEESFEF
IIVSLTGQMWHFEVTTYEERELWVQAIESQIFASLQSCESSKNKSRLGSQSDAMTIQSIR
NVRGNSFCVDCDSPNPDWASLNLGALICIECSGIHRHLGTHLSRVRSLDLDDWPVELSMV
MTAIGNAMANSVWEGALEGYTKPGADSSREEKECWIRAKYEQKLFLLGLPQSDVPLGQQL
LRAVVEDDLRLVVLLLAHGSKDEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDVK
SRDARGQTPLFFARRAGSQECVDILVQHGCPTDSVGASTPPGTRHNPNANNNNGQCEMNR
SISIM
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaggacagaccggtttcctgcacttctgcaggactgttctcagcagaggttctctgga
acagatattaattcagcctcgaacaagagaacccagtggattaaggactttaacccagcg
tctaaagtgggctgcatacctgaaacggaatattgtaatggagaggtcacagcagattgc
cctgtggtggtcctgcgaaggtctaccttggaggtgcgacacgttggcagcagccggaag
acagtgagcatgtatggctccctggacgaaccccaacaacaaggttacaccacagtgggg
catgagtataggtcacagagacctcacagtgtgtgcatgctggccgccgccaagtcgagc
agtgtgctcgtgactcattcctcgtcaggtaaagagcgatactctgaccgtcttcaggag
cgcagatgcaatcgagcgcttgatggcctcaagcaagacatgcctccgtctttccgcctg
ccgtcatactcgcaacaggaggtgctgcctcgccgtaccctacagacatctggaaaacct
cggcctgttagcatgacagttctagagttaaaggagagtattaggccagaagacgaactg
gctaaccgcacttttagcgatgccgcaagcctgccacgctctggctttcgatggaggtta
tttggacgacaggcacaagataaagaggcagtgctggcacctaccagcaccaaaccagac
aggccaaagaaaaggtttagctctctgcgacggagcctaagcctcaggctcaagcgaaat
tgtaatccaccagaacaagatgctgtacgcgaaagaacatggacaacgaacgcgagagac
gtggcgcgccctaaccagcctttttcatatctgactggtagaacgttgtcttctgcttac
gaacacagtgagcaccagagaggcaagcaggtaattgagttccaaaccagagggaaggtc
tcggttatcgaggttcccttagcaccacctaaactcaccaagccctttaaaccgacgtct
tcagagccgaatttttggcagcttatcactagtcgctttaagaggaaaagcaacaaatcc
gaggcttgtgctgaaagccaacaatctggcacgggtcccccggcctggaataaaaagccg
cagccagttaccatagagactctaaagggcattgatttcagcaaaggtcaagattccttt
gtcaacagtcaggagtggacattgagtagatcagttccagagctcaaagtgggcattgtg
ggtaacctctccagcgggaagtcggccctcgtacaccggtacctgacaggaacatatgtc
caggaagagtctccagagggaggacggtttaaaaaagagatcgtggtggatggacagagc
tacctgctgctaatccgagatgagggaggacctcctgagcttcagtttgccgcctgggtg
gacgctgtggtgttcgtcttcagcctggaagatgagatcagtttccagacggtctacaac
tacttcctgcgcctgtccagctacaggaacacggccgaggtccccatggtgctggtgggc
acgcaggacgccatcagtgccaccaacccgcgagtcatcgacgacgccagagcccgcaag
ctctcaaacgacctgaagcgatccacctactacgagacctgctcaacttacggcctcaac
gtcgagagagtcttccaggacgtcgctcagaaggtggtggctctgaggaagaagcagcag
ttggccatcgggccgtgtaaatccctacccaactctccgagtcacacgtccgtcccggcc
gcggccatcccttccgtacacctcaaccaggctactaacggagggggtgtgccattcagt
gactactcctcctcagtgccctccactcccagcatggggcagcgggagatgcgcatcgag
accatcgcggcctcgaacacgcccacgcccatccgcaagcagtccaaacgccgctccaac
atcttcacatctcggaaagcgagcgagcaggcgaagagctccgagtgtaaaactgacagc
ataggaagtgggagggcgattcccattaaacagggaattctgctgaagaggagcggcaag
tcgctcaacaaagagtggaaaaagaagtacgtgacgttgtgcgacaacggcgtcctcacc
taccaccccagcttacacgattacatgcagaacgttcacgggaaagagatcgatttgctc
cggaccacagtcaaagtgccggggaaaaggccgccccgggccgtggctacggtagccccg
actgcaagtccaaaaagcaacggtttgaccaaggacaggagcgcactgcagctcggcatc
ggagccacaggtgcttcccactccaacagcagtacctctttgcagtctgggggcgtgtcc
agtggactgggtgtggtctccgggggcggggctaaagagggaatgcatcagcgctccttc
tcggtgtccagtgctgagcagtggaatgaagctgttaacacgagcagcacttctgccaat
ggaactttggattctctcagcgccgctactggtctaggtggacccaccagtcccaaactg
gaaccacctccttcgccacatgcgaaccgcaagaagcataggaggaaaaagagtacgggt
atcaccaaacctgacgggctttcagcagggactgaagagcaagaagagtcattcgagttc
atcattgtgtcattgaccggtcagatgtggcacttcgaggtgaccacgtatgaagagaga
gagctgtgggtccaagccattgagagtcagatatttgccagcttgcagtcgtgtgaaagt
agcaagaataagtctcgattagggagccagagtgacgccatgaccatccagtctatcagg
aatgtgagagggaacagtttctgtgtggactgcgactcccccaatcctgactgggcgagt
ttgaacctcggtgctctgatctgtatcgagtgctctgggatccatcggcacctgggcact
cacctgtcccgggtgcgctcgctggacttggacgactggcccgtggagctgagcatggtg
atgacggctatagggaacgctatggcgaacagtgtgtgggagggagcgctggaggggtat
accaaacctggagctgatagcagcagggaagagaaggagtgttggatcagagcgaagtac
gagcagaagctgtttcttttgggcctgccacagtcggatgtacccctggggcagcagctc
ctgcgggccgtagtggaggacgacttgaggctggtggtgttgctcctggctcacggcagt
aaggacgaggtgaacgagacgtacggcgacggggacggccgcaccgccttgcacctctcc
tgcgccatggctaacgtcgtcatcacgcagctgcttatctggtacggagtggacgtgaag
agtcgcgacgcccgaggtcagacgccactcttcttcgcccggcgtgcgggaagccaggaa
tgcgtcgacatcctggtccaacacggctgccctacggactccgtcggtgcgtcgacgcca
cccgggacacgccacaaccccaacgccaacaacaacaatggacagtgcgagatgaatcgc
agcattagcatcatgtag
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