Silurus meridionalis (southern catfish): 124384056
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Entry
124384056 CDS
T08004
Symbol
rbm26
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124384056 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124384056 (rbm26)
03041 Spliceosome [BR:
smeo03041
]
124384056 (rbm26)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124384056 (rbm26)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124384056 (rbm26)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124384056 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
RRM_3
zf_CCCH_4
RRM_Thc1
Motif
Other DBs
NCBI-GeneID:
124384056
NCBI-ProteinID:
XP_046702536
LinkDB
All DBs
Position
1:complement(30740660..30752861)
Genome browser
AA seq
1030 aa
AA seq
DB search
MIIENLDALKTWLTKTLEPICDADPSALAKYVVALVKKDKSEKELRALCIDQLDVFLQKE
TQTFVDKLFEAVNTKSYLPQVETMSSTDRSEGHARSEKDEQKKDEPGRDDEREKKFSRRV
NHSPQPGSRYSRDSRRIDERKKDDRSRKREYDRPPLRRDSYRERYNRRRGRSYSRSRSRS
WSKDRVRDRERDRERDRDRERDRERSRTRSRSRSRSREREPGKPKYDHERPEGGAPRPSH
PTPPLASAPSSSHFPVPALSSTITVIAPTHHGNSTTESWSDFHQDQVPYGRAAPPPSRKR
CRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPSILPFPPAPHPVGDGPPPPGLPPPPAL
LPPPPVNLRPPVAPGSLPPVTGPPPPLPALDAPPNSMNNSVPSIVSTSRPLLPQPPLHLV
TSGLRPPLSQPPPPLFTPGKHYNIGAFGNSFEPDVYNPEAPSLNSRPPYRPRVNVQRPNL
IGLTMGEVDRPPRDKMLNSNAARIVLESDFRKRGPGHHDGGLPAKKPWFDKPNFNKPNHH
GYYKKLPLSLPLPLPNTKLAIRQIPPELNNISKLNEHFSKFGKIVNLQVAYKNDPESALI
QFESPEEAKRAIQSTEAVLNNRFIKMHWHRDDGPPGTQTHTPLNMQSVQQPEATSLKQSV
KDRLGPLPSNSTEPLQDATPPSQSSQSAARSSVKDRLGFSKPAAAAEGKVFSTSTGLTKT
FYNPAALKPGQKGGVTGTAASVEDALKKKQEALKLQQDVRKKKQEILEKHIETQKLLISK
LEKNKLMKAEDKAQLMQTLNTLTDSITKLQEEIKSLSSAHTLHGGIKTKAQAQKELLDTE
LDLYKKTQAGEDTAQLKLRYTQLQLEAAKRGILTPGRGRGAHTRGRGTARGRGRGIRGRA
RGVPNHAVVDHRPRALEISAFSEADRVDLLPHFAQFGEIEDCQMEDSSLSAIITFRTRAE
AEQAAVHGVRLNNQELRLSWYKPAVPLSVTDPDEAEPEEDEFQEDTLVDDTLLQDDDEEE
DDNEPRSWRR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgattattgaaaacctcgatgccttgaagacgtggctcaccaaaactctcgaaccaata
tgtgacgccgatccgtctgcgctcgctaaatatgtggtggctttggtgaagaaggacaag
tcggagaaggagctgagagcactatgcatagaccagttggatgtatttctccagaaggag
actcagacattcgtggataaactttttgaagctgtgaacacaaagagctacctacctcag
gttgagacgatgagctccacagacaggtcggagggtcatgcacgctccgagaaagacgag
cagaagaaagacgagccgggtcgggatgatgaacgagagaagaagttctccaggagagtg
aaccacagtccccagcccggctcacgttacagccgagacagcaggaggattgatgaacgt
aagaaagacgatcggtctagaaagcgggagtacgatcgtcctccactcagacgcgactcg
tatcgagagcgctacaaccggcgcagggggcggagctacagccgaagccggagtcgcagc
tggagcaaagacagagtgcgggaccgggaacgagatcgcgaaagagacagagatcgcgag
agggatcgggaacgcagcaggacgcgcagccgatccaggtctcggagtcgagagagggag
cctggaaaaccaaagtatgaccacgagcgaccggagggtggagccccgaggccttcccac
cccaccccaccccttgcctctgctccaagctcctcccattttcccgtacctgctctcagc
agcaccatcacagtcattgctcccactcaccatggcaacagcaccacagagagctggtct
gattttcaccaagaccaagttccatatggtagagcggctccacccccttcacgcaaacgg
tgtcgtgattatgacgagaaagggttctgtatgcggggtgatatgtgtccgttcgaccac
ggcagcgatccagtggtggtggaagacgtcaaccttcccagcatcctccccttcccacct
gcgccgcatcctgtcggggatggtccgccccctccgggtctgccgccacctcccgctcta
ctcccacctccaccggttaacctccggccccctgtggctcctggaagcctcccacctgtc
acaggtcctcctccacctctcccagctctggatgctcctcccaactccatgaacaactct
gtcccctccatcgtctctacgtctcgccccctgctccctcagcctccactgcacctggtc
acttcaggactccgacccccactgtcacagccaccaccgcccctctttacaccgggtaaa
cattataacatcggcgcatttggaaattcatttgaaccggacgtctataaccctgaagct
ccgagtctgaactctcgcccgccgtatagaccccgagtcaacgtgcagagaccgaacctt
atcggcctcactatgggagaagtggatcgtcctccgcgagataaaatgctgaacagcaat
gctgcccggatcgttttggagtctgacttcaggaagagagggccgggccaccatgatggg
ggccttccagctaaaaaaccttggtttgataagccaaacttcaacaagcccaaccatcac
ggatactataagaaactgccgctttcactgccgcttcctctgcctaacactaagctggcc
atccggcagatcccacctgagctgaacaacatcagcaaacttaacgagcacttcagcaaa
tttgggaaaatcgttaacctgcaggtggcatataaaaatgaccccgaaagtgccctgatc
cagttcgagtctccggaggaagcgaagcgcgctatacagagcacagaggccgtcctgaac
aaccgattcatcaaaatgcactggcacagagatgacgggccgcccggcacacaaacacac
accccgctcaacatgcagagcgtacagcagcctgaagccaccagtctgaagcagtcggtg
aaggatcgtctcggccccctgccctcgaacagcaccgagcctctgcaggatgccacgcct
ccatcacagtcttcacagagtgcggctcgatcatcggtcaaggatcgcctgggcttctca
aaaccagcagcggcagctgaaggaaaggtcttctccacctccactggactcacaaagacg
ttttacaacccggccgcactcaagccagggcagaagggtggggtgactggtacagcggcc
agtgtggaggacgcactgaagaagaagcaggaggcactaaaacttcagcaagatgtccgg
aagaagaagcaggagattttggaaaagcacatcgagactcagaagcttctgatttccaag
cttgagaagaacaagttgatgaaagcggaggacaaagcgcagctgatgcagacgctcaac
actctgaccgacagtatcaccaaactgcaggaggagatcaagagcctttctagtgcacac
acactgcatggcggcatcaaaaccaaggcccaggctcagaaggagttattggacactgaa
ctcgatctatacaagaaaacgcaagctggagaagacactgctcagctcaaactcagatac
acgcagctgcagctcgaggcggctaagcgtggcattctgaccccagggcgtgggaggggg
gcccatacccggggtcgcgggacggcgagggggcgtggccggggcattagagggagagcg
agaggggttcctaaccacgctgtggtggatcatcgaccccgcgctctggagatcagcgcc
ttctctgaggctgaccgagtggacctgctgccacattttgctcaatttggggagattgag
gactgtcagatggaggactccagtctcagtgccatcatcaccttcagaacccgagcagag
gctgaacaggcggccgttcacggcgtgaggttgaacaatcaggagctgcgtctctcctgg
tacaaaccagccgtcccgctcagcgtgaccgaccctgacgaggcagagcctgaggaagat
gagttccaggaggacacgctggtagacgacacgctgctgcaggacgacgacgaggaagaa
gacgacaacgagccacgttcatggcgcagatga
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