Silurus meridionalis (southern catfish): 124384062
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Entry
124384062 CDS
T08004
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124384062 (tmc4)
03037 Cilium and associated proteins [BR:
smeo03037
]
124384062 (tmc4)
Transporters [BR:
smeo02000
]
Other transporters
Pores ion channels [TC:
1
]
124384062 (tmc4)
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124384062 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF4423_like
Motif
Other DBs
NCBI-GeneID:
124384062
NCBI-ProteinID:
XP_046702549
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Position
4:7673178..7680548
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AA seq
781 aa
AA seq
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MYPDVCFSYNSDVAETGFQIPDFLSKPDIMIYKPQLVYFIPNNSNGICTYHFLFLAFLSQ
GPNSGYGSLRLRKGPLNKGIEGTVQFDWNSRPNEDEGEDENADKMQKLRELPLHMGLKKA
IRQVQQMQIPVVSSWGSWRFRSSKTFQRFREDLWSVLYFIELWRKSMHQIGGHFGGGVQS
YFLFLRFLVILNFLSFMLMAGFVIIPSIVFRSNNSSGQLLVPSLNLSGVEVCLLYDVQPQ
PLTIYYTYFLDLLSGTGFMEYSYLFYGFYNNTEVLSNGFSYNIPLAYLLTAAFYFLFCLL
CIVVRMGGVVRLVVAMDGGRLGGYSVLVFTGWDHGLQDPGAAKVKHNNLRYCLQVDLEEE
RIKKKSDSLTLSQVFILYSLRVLLSLIALAMIVGAFFAIGSATLYSQQFPQQDGVVGLLL
QYLPSIVITASNFVVPFLCDQIAKLEKYSPSVTVIFALLRAVFLRFVSLAVLLSTLWEQI
TCKGNAEDQKCSPCSYSYTNYQCWETRVGQEMYKLTLFDFLITIAVLILVEFPRRLMVDH
CSCKLSQWFGRQEFVVPSNVLALVYSQTVVWSGALFCPILPLINTIKFIIIFYCKKVTLF
QNCRPAVRTFRSTSSNFFIFLVLVFGWALSSVVLIYSVASIHPSYGCGPFRFFSSMWAVV
PASFHSLSVTTREFLLYVGSQAFSIPLFILSCVVMCYVAALASVYGKTVDLLKKQHKLEG
RDKQFLIKQIKDLSAKVSRNEHVTKLGEAGNAAPRWEGNYNSAFELNEEDFRNSGYYKRD
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtaccctgacgtttgtttctcgtacaattccgacgtggcggaaacgggcttccagatt
ccagattttctatccaaaccagatataatgatttataaaccccagctagtgtactttata
cccaataacagtaatggtatctgcacctatcacttcctgttccttgcatttctttcccaa
ggtcctaacagcggctacggctcactaaggttacgcaaaggtcccttgaacaaaggtatt
gagggcacagtgcagtttgactggaactcacgtcccaatgaggacgagggcgaggatgaa
aatgcagacaaaatgcaaaagctcagagaactgccgctccacatggggctgaagaaagct
atacggcaggtgcagcagatgcaaattcccgttgtctctagttggggctcctggcgtttc
cgttcctccaagacctttcagcgttttcgcgaggacctgtggagcgttttatatttcatc
gagctctggaggaagtccatgcaccagatcggaggacatttcggaggaggcgtccaatcc
tacttcctgttcttgcgattcctggttattctgaacttcctgtccttcatgttgatggcc
gggttcgttatcatccccagcatcgttttccgctcaaacaactcgagtggtcaattactc
gttccctccctcaacctttcaggtgtggaagtgtgcctgctttacgacgttcagcctcaa
cctctgaccatttactacacctacttcctggatttgctctcaggaactggcttcatggag
tactcgtatttgttctatgggttttataacaacacagaggtcctaagcaatgggttttct
tacaacattccattggcttacctgctcaccgccgctttctacttcctgttttgcttgtta
tgcatcgtggtccggatgggtggagtggtgcggctcgtcgtggcgatggacggcggacga
ttaggagggtacagtgtgcttgtttttacagggtgggatcacggccttcaggatccagga
gctgccaaagttaaacacaacaacctgcgctattgcctacaggtggatctggaggaggag
aggattaagaagaaatctgactcgctcactctgtctcaagtgttcattctttattccctc
cgagtcctcctaagccttattgctttggccatgatagtcggcgccttcttcgccatcggt
tccgccactctgtacagtcagcagtttccgcagcaggacggcgttgtgggattgctgctg
cagtatcttccctccatcgttataaccgccagcaattttgttgttccattcctgtgtgac
cagatcgcaaaactggagaaatattcacctagcgtcactgtgatcttcgctttgctacgg
gccgtgtttctccgatttgtgagtttagctgtactcttgtccactctgtgggaacagatc
acgtgtaaaggaaacgcagaggatcaaaaatgttcaccctgcagttacagttacacaaat
taccagtgctgggagacacgtgttggacaggaaatgtacaaactgacgctgtttgacttt
ctcatcacaatcgcggtgctgatactggttgagtttcctcgcaggctgatggtggatcac
tgctcgtgtaagctgtctcagtggttcgggcgtcaggagtttgttgttccctcaaacgtg
ttagccctcgtttacagtcagactgtagtgtggagcggcgcgttgttctgccccatactg
cccctcatcaacaccatcaagttcatcatcatcttctactgcaaaaaagtcactctattc
cagaactgtcgtccggccgtgaggacgttccgctccaccagctccaacttctttatcttc
ctggttcttgtgttcggctgggcgctctctagtgtggtgctcatttatagtgttgctagt
attcatccgtcctatggatgcgggccgtttcgtttcttctcctccatgtgggctgtggtt
cctgcttcctttcattctctgtccgtcacaacgcgggagtttcttctgtacgtcggctca
caagctttctccatcccgcttttcattttatcatgtgtggtgatgtgttacgtggctgcg
ttggcttcagtttacgggaaaaccgttgacctcctgaaaaaacaacacaaactggaagga
cgagacaaacagttcctgatcaaacagatcaaggatctgagtgcaaaagtttcccgaaat
gagcatgtaacgaaactcggagaagcaggaaatgccgcgcccagatgggaaggaaattac
aattctgcgtttgagttaaatgaagaagactttagaaacagtggatattataagagagac
atttga
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