KEGG   Silurus meridionalis (southern catfish): 124384063
Entry
124384063         CDS       T08004                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    124384063 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124384063 (wdr24)
Membrane trafficking [BR:smeo04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    124384063 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 zf-RING_16 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 DUF1290
Other DBs
NCBI-GeneID: 124384063
NCBI-ProteinID: XP_046702551
LinkDB
Position
4:7468263..7474167
AA seq 770 aa
MEKMTSVGTVSGRTMFCLLDAPANAISVCRDATQVVVAGRNIFKIFALEEEGFVERLNLR
VGRKPSLNFSCADVMWHQADESLLATAATNGAVVTWNLLRPCRNKQEHLFAEHKRTVNKV
CFHPSEAHMLLSGSQDGFMKYFDLRKKESVSTFSGQSESVRDVQFSTKDFFTFAASFENG
NVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTNRAKEIY
CVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPYIPFATFEEHKDVATGIVWR
NQHDPDVLLSGSKDSTLYQHMFNDATRPEVRANPEGLSFGLFGDLAFAAKESLMAAEGGR
KPCPGGDRRYPFFFVKRHDVMERFAQVSSVLSVFESDPDSGTRMDWFIETARRYQLSGRP
FGELCDHNAKVAKELNRPQVSTTWTMLRIMYSDTGHPTPPANHNMSKLGNVPLMNSFNLK
DMTAALNERNKENRSDNLETNLNNDENEETEGSDGQAEYLFGEAELDDDDLYSMEHDNQA
AEEAEFSLPQEAFPLRHEIVEHATAPEPPAEKAESPQASGGEAESVCLTPMESFSLISVS
QLLFQPRLPPGFFNAIVKDALAYYAEQGDVQMAVSALVVLGERIRKEVDELTQEHWYMSY
IDLLQRFELWNVSNQVIKLSTCSAITCLNQASTTLHINCSNCKRPMSNKGWICDRCHQCA
SVCAVCHHVVKGLFVWCQGCSHGGHLEHMMEWLKSSNHCPAGCGHLCEYA
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggagaagatgacctcggtcggcaccgttagcgggcggaccatgttctgcctcctggat
gctccggccaacgctatcagtgtgtgtcgggatgccacacaggtggtggtggctgggcgc
aacatcttcaagatatttgcgctcgaagaggaaggcttcgtggagcgcctaaacctgcgt
gtgggccgcaagccatctctgaacttcagctgcgctgacgtcatgtggcaccaggccgac
gagagccttctggcgacagcggcgaccaacggcgcggtggtgacctggaaccttttgcgg
ccgtgccgcaacaagcaggagcaccttttcgctgagcacaagcgcaccgtcaacaaggtg
tgcttccaccccagcgaggcgcacatgctgctctcgggctcccaggacggcttcatgaag
tacttcgacctgcgcaagaaggagagcgtcagcaccttctcgggtcagtcggagagcgtc
cgagacgtgcagttcagcacgaaggactttttcacgttcgcagcgtcgttcgagaacgga
aacgtgcagctgtgggacatccgcagacctgaccggtacgagaggatgttcaccgcgcac
actggccccgtcttctgctgcgactggcaccctgaggacagaggatggttggcgacgggc
gggcgcgacaagatggtaaaagtgtgggacatgacgacgaaccgcgccaaagagatctac
tgcgtgcagaccatcgcctctgtggcgcgggtcaagtggcgtccggaacgtcgctggcac
ctggcaacgtgctccatgatggtcgaccacaacatctacgtttgggacgtacgacggccc
tacatcccattcgccaccttcgaggagcacaaggacgtcgccacgggcatcgtgtggcgc
aaccagcatgaccccgacgtgctgctatccggctcgaaggacagcacgctgtaccagcac
atgttcaacgacgccactcgtccggaggtgcgcgccaacccagagggcctcagcttcggg
ctgttcggggaccttgcgttcgccgccaaagagagcctgatggcggccgagggcgggcgc
aagccgtgcccgggcggggaccgccgctacccgttcttttttgtcaagagacacgacgtg
atggagcgctttgcgcaggtttccagcgtgctcagcgttttcgagtccgacccggacagc
ggcaccaggatggactggttcatcgagacggcgcgcaggtaccagctgagcgggagaccc
ttcggcgagctctgcgaccacaacgccaaggtcgccaaggagctcaacagacctcaggtg
tccaccacatggaccatgctacggataatgtattcggacacgggccacccaacgcccccg
gccaatcacaacatgagcaaactgggaaacgtgcccctcatgaacagtttcaatttgaag
gacatgaccgcagctctaaacgagagaaacaaagagaatcgatcggacaatctggagaca
aacctcaacaatgatgagaatgaggagacggagggcagcgacggccaggcggagtatctg
tttggcgaggccgagttggacgacgacgacctgtacagcatggagcacgacaaccaggca
gcggaggaggcggagttttccctcccccaggaggcgttcccgctgcgccacgaaatcgtg
gaacacgcgacggcacccgagccgccggccgaaaaagccgagtccccgcaggcgagcggc
ggcgaggccgagagcgtgtgcctgacgcccatggagtccttcagcctgatctcggtgtcg
cagctgctgtttcagccgcgtctgccccccggctttttcaacgccatcgtcaaggacgcg
ctggcctactacgccgagcagggcgacgtgcagatggccgtctcggccctcgtcgtgctc
ggggaacggatccgcaaggaggtcgacgagctcacgcaggagcactggtacatgtcctac
atcgacttgctgcagaggttcgagctgtggaacgtgagcaaccaggtgatcaagctgagc
acgtgcagcgccatcacgtgtctcaaccaggcgtccacgacgctgcatatcaactgcagc
aactgcaagcgacccatgagcaacaagggctggatctgtgaccggtgccaccagtgcgcg
agcgtgtgcgccgtgtgtcaccacgtggtgaaggggctgttcgtgtggtgtcagggctgc
agccacggcggccatctggagcacatgatggagtggctcaagagctccaaccactgtcct
gctgggtgtggacatctctgtgaatatgcctga

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