Silurus meridionalis (southern catfish): 124384064
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Entry
124384064 CDS
T08004
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124384064 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124384064 (arnt)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124384064 (arnt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
bHLH_NCOA
Per3-like_PAS-A
HAUS2
Motif
Other DBs
NCBI-GeneID:
124384064
NCBI-ProteinID:
XP_046702554
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All DBs
Position
4:7759131..7766651
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AA seq
764 aa
AA seq
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MLEISREFGVDVISNLYNDTQHSRFDMADVSPLGMAVAAGSHADVGAVVPKGSNKRAATS
DFDDDDEGGKLFRCDDDSGNSNDKERFARENHSEIERRRRNKMTAYITELSEMVPTCSAL
ARKPDKLTILRMAVSHMKTLKGSGNTSTDGTYKPSFLTDQELKHLILEAADGFLFVVLCE
SGRVAYVSDSVTPVLNQSQSDWLGSSLYDQLHPDDKEKLREQLSTTENNNSGRMLDLKTG
TVKKEGSQSTVRMSMGARRSFICRMRCGNCPMEPMSMNRLGALKSRNRSGLGPGKEGEPQ
FVVVHCTGYIRSWPPAGVSLSEDECESGQGNRCCLVAIGRLQVTCCPNDSSAGSISVPVE
FISRHNCQGAFTFVDHRCVATVGYQPQELLGKNFLELAHPEDQGLLRDSLQQVVKLRGQV
LSVMFRFCTKSGEWILMRTSSFTFQNPYSDEIEYIICTNTNVNKAPNQDALSPLSSPRGA
LPPSMGQNSPSCPPASSPVQIKHSRQLQQQQQAEMEGGGGREEIYEAGQVALPQVQVQSV
GPDPNHSKVLNSNAPPSGQQVYPSSAPFNANSRATEAFRQAPLATQMLSHMSRQSAPSGL
PVNNSSPVQSQSANPVPPAAWAQSRPPFNAQAAKTQSPQFPMQNFSSAPSSSASSSFVQM
GGASSNMAANSANYSQMNPRGHQATNGYGDVNQSGPQFSSRPAEATAWQQWPNQPHTQNA
AESHPHIQNNQPEMFTDVLSMLDSSANFSNEDFTEMPMFPPFPE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatatcgcgagaattcggtgtggacgtaatatcgaatttatataacgataca
caacattcacggttcgacatggccgacgtgtctccgttggggatggcggtggcagccggg
tctcacgccgacgtcggagccgtggtgccgaagggcagcaacaaacgagccgccacctca
gactttgatgacgatgacgaaggagggaagctgttcagatgcgacgacgactcgggcaac
tcgaacgacaaggagcgattcgccagggagaaccacagcgagatcgagcggcgcagacgc
aacaagatgaccgcctacatcacggagctgtcggagatggtgcccacgtgcagcgcgttg
gcacggaaaccagacaagcttaccatcctgcgcatggcggtgtctcacatgaagaccctg
aaaggcagcgggaacacgagcacggacggcacgtacaagccgtccttccttaccgaccag
gagttgaagcatctgattctggaggcggcggacggcttcctgttcgtggtgttgtgcgag
agcgggcgcgtggcgtacgtatcggactcggtgactccggtgctgaaccagagccagtcc
gattggctcggctcgtctctgtacgaccagcttcaccccgacgacaaggaaaagctgaga
gagcagctgtccaccactgagaacaacaacagcggccgcatgctggacctgaagacgggc
acggtgaagaaggagggaagccagtcgacggtgagaatgagcatgggggcgcgccgctcc
tttatctgcaggatgaggtgtggaaactgtcccatggagcccatgtccatgaacagactt
ggcgctctaaagagcagaaacaggagcgggctgggtccggggaaagagggggagcctcag
tttgtggtggtgcattgcaccggatacatccgatcctggcctcccgcaggcgtttctctg
tcggaagacgagtgtgaaagtggacagggcaaccgctgctgtctagtggccatcggaagg
ctgcaggtgacgtgttgtcccaacgacagcagcgctggcagcatcagcgtgccggttgag
ttcatctcgcggcacaactgtcagggagccttcaccttcgtggaccatcgctgcgtagcg
acggtgggctaccagcctcaggaacttctgggaaagaacttcctagagctggctcatcct
gaagaccagggcctcctgagggacagccttcagcaggtggtaaagctccgtggtcaggtc
ctgtccgtgatgtttcggttctgcaccaagtcgggtgagtggatcctgatgcgcacgagc
tccttcaccttccagaatccgtactcggacgagattgagtacatcatctgcaccaacact
aacgtcaataaagctccgaatcaggatgctctctcccctctgtcctcccccaggggggca
ttacccccctctatggggcagaacagccccagctgccccccagcttccagcccagtgcag
ataaaacactccaggcagctccagcagcagcagcaggccgagatggagggaggaggagga
cgagaggagatctatgaggccggacaggtggctcttcctcaggttcaagtgcagtcagta
ggaccagatcctaatcattctaaggttttaaactccaatgcaccccctagtggacagcag
gtttatccctcttctgccccattcaacgctaattcgcgtgccactgaggcgttcaggcaa
gctcctttggcaacccagatgttatcccacatgtcgcgccagagcgccccctctggtctc
ccggtgaacaacagtagcccggttcagagccagagcgcgaaccctgtgcctcctgctgcc
tgggctcaatcacgtcctccattcaatgcacaggcggcaaagacgcagtcaccccaattt
cccatgcagaattttagctccgccccatcctcctcggcttcctcctcttttgtacaaatg
ggcggcgcttcatccaacatggcggccaactcggcgaattactcacagatgaaccctcgc
ggacaccaagccaccaacggatacggtgacgtaaaccagtcagggccgcagttctcctcc
agaccagcggaggcaacagcgtggcagcagtggccaaatcaaccccacacacaaaacgca
gcggaatctcatcctcatatccagaacaaccaaccagagatgtttacagatgttctgtcc
atgttggattcgtctgcaaacttcagcaacgaagacttcaccgagatgcccatgttccct
ccgttccccgagtga
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