Silurus meridionalis (southern catfish): 124384073
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Entry
124384073 CDS
T08004
Symbol
asic1c
Name
(RefSeq) acid-sensing ion channel 1C isoform X1
KO
K04830
acid-sensing ion channel 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124384073 (asic1c)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
124384073 (asic1c)
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GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
124384073
NCBI-ProteinID:
XP_046702569
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Position
4:complement(7813196..7866863)
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AA seq
542 aa
AA seq
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MTAMKGDSEDSIESIRPSNLQAFANSSTLHGMSHIFAYGHMTFRRILWTLSFLGSLGLLL
VVCMDRVFYYFEFPHVTKLDEVAATNLTFPAITLCNLNEFRFSKMTKNDIYHVGELLALL
NENYQIANPNLAEPEFLAALKEKANFANFNPKQFSMTDFYNRTGHDISDMLLQCTFQGQN
CYHFNFTTIYTRYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDE
TSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCRSSGMDSE
YFSTYSITACRIDCETRYLLENCNCRMVHMPGTSTVCTPEQYKDCADPALDFLVEKDNNY
CVCQTPCNMTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGDNILVLDIFFEALNYEKI
EQKKAYEVAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVFKDKVLGYFLRKGRPRRSAS
DNLGWGQFRFNSANLGLGWRPDARTTLRTPPALVSRLIIPPEHMRHTPESLGQPRIRAER
AT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatgaagggagattcagaggacagcattgagagcatcaggccttcaaacctg
caagctttcgccaactcgtccacgctgcacggcatgagccacattttcgcctacggacac
atgacattccggcgcattttgtggactttgtcgtttctgggctcgctcgggctgttgctt
gtggtctgcatggaccgcgtgttttactacttcgagtttcctcacgtcaccaaactggac
gaggtggcagcgacgaacctcacttttcccgccattactttgtgcaacctcaacgagttc
cgcttttccaaaatgaccaaaaacgacatctaccacgtaggagagctgcttgccctgctc
aacgagaactaccagattgcgaacccaaacctggccgagccggaattccttgctgctctt
aaagaaaaggccaattttgccaactttaatcctaaacagttcagcatgaccgatttctat
aaccgaacgggccacgacatcagtgacatgcttctacagtgcactttccaaggccaaaac
tgctaccatttcaacttcaccacaatttacacgaggtacggcaagtgttacacttttaat
tcgggccttgatggcaacccgctgctgacgacgctgaagggcggaacaggaaacgggctg
gagataatgctggacattcagcaggatgagtacctgcccgtgtggggagaaacagacgaa
acctcgtatgaagcaggcatcaaagtacagatccacagccaggatgaaccgcccttcata
gaccagctgggattcggtgtggcccctggttttcaaactttcgtgtcttgtcagcagcaa
ctgctacagtatctcccaccgccctggggcgactgccgatccagtgggatggactcggag
tacttctccacgtatagcataacagcgtgtcgcatcgactgtgaaacccgctacctgctg
gagaactgtaactgccggatggtgcacatgccaggtacctccaccgtatgcaccccggag
cagtacaaggattgcgccgatcctgccttggatttcctcgtcgaaaaggacaacaattac
tgcgtgtgccagacgccttgcaacatgactcgctacggcaaggagctgtccatggtgaaa
atccccagcaaagcgtctgccaaatacctggccaagaagttcaacaaatcggagcagtac
atcggagataacatattagttctggatatcttctttgaggccctgaattatgaaaagatt
gagcagaagaaggcttatgaagtggctggtctacttggtgacatcggagggcagatgggg
ctgtttataggagcaagtgtcctgaccatactggaaatatttgattatttatatgaggta
ttcaaagacaaagtattgggctactttctacgtaaaggacggccacgtcggagcgcgagc
gataatctgggttggggtcagttcaggttcaattccgcaaatttaggacttggatggagg
cctgatgcaaggacaactctgagaaccccaccagccctggtgtcacgcctaatcataccc
ccagagcacatgcgacacactccggagtcactcggacagcctcggattcgcgccgaacgt
gctacctag
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