Silurus meridionalis (southern catfish): 124384077
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Entry
124384077 CDS
T08004
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124384077 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124384077 (prpf31)
Spliceosome [BR:
smeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124384077 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124384077
NCBI-ProteinID:
XP_046702581
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Position
4:7700851..7705017
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AA seq
509 aa
AA seq
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MSLADELLADLEEARDEGEDELYPGGEEQSDGETANREGHGGLEDIPEEMETDFSSTESV
TSIAKLRNSKSFSEIMEQIVQYAENPRKNADVSGPVEADPEYRLIVAANNLTVEIDNELN
IIHKFVRDKYSKRFPELESLVPNTLDYIRTVKELGNNLDKCKNNETLQQILTNATIMVVS
VTASTTQGVLLAEDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTA
AKLMGIAGGLTNLSKMPACNLMLLGSQKRTLSGFSSTTLLPHTGYIYHCDVVQSLPPDLR
RKAARQVSAKCTLAARVDSFHESADGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
ASRTKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAA
EKKVAEANQKYFSNMAEFLKVKKEGGAKA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagacgaactcctggctgatttggaggaggccagagatgaaggagaagac
gaactgtatccgggcggagaagagcagagcgacggagaaaccgcgaaccgagagggacat
ggaggactggaggacattcccgaagagatggagacggacttcagcagcacagagagcgtg
acctctatagcgaaactgcgcaacagcaaatctttttccgagatcatggagcagatcgtg
cagtatgcagagaatccacgtaaaaacgcagacgtttcgggtccagtggaggccgatccc
gagtaccggctcatcgtcgcggccaacaacctcacggtggagatcgataatgagctgaat
attattcacaagtttgtgcgtgataaatactcgaagagattcccggagcttgagtcgctg
gtgcccaacacgctggattacatcaggaccgtcaaggagctcggcaacaacctggacaaa
tgtaagaacaatgaaacactgcagcagattctgaccaatgccaccatcatggtggtcagc
gttaccgcctcgaccacgcagggcgtgctcctggcagaggacgagctccagcggttggag
gaagcctgcgacatggcgctcgagctcaaccaatccaaacaccgcatctacgagtacgtc
gagtccaggatgtccttcatcgctcccaacctgtccatcatcgtcggagcctcgacggcc
gccaaactcatgggaatcgcaggaggtctgactaacctgtctaagatgcctgcgtgtaac
ctgatgctgctgggatcacagaagagaactctgtccggcttcagcagcaccacgctgctc
cctcacacgggctacatctaccactgcgacgtcgtccagtccctgcctccggatctaagg
aggaaggcagcgcgccaagtctcggccaagtgcacactggcagcccgtgtggacagtttc
cacgagagcgcagacggcaaggtcggttacgacctgaaggaggaaatcgagcgcaaattc
gacaagtggcaggagccgccgcccgtcaaacaggtgaagcccctccccgcccctctcgac
gcttcgaggaccaagcgaggaggccgaaggtatcgtaagatgaaggagcggttgggactc
acggagatccgaaagcacgcaaacagaatgacgttcgccgagatcgaagacgatgcgtat
caggaggatctgggcttcagcttggggcagctgggcaaatcgggcagcggcagggtgaga
caggcgcaggtcaacgacgccaccaaagctcgcatctccaaatccctgcagcggacgttg
cagaaacagagcatgacgtacggagggaagtccaccgtcagagacaggtcttcaggaacg
agctccagtgtggcattcactccattacagggtctggagatcgtcaatcctcaggccgcg
gagaagaaggtggccgaagccaaccagaaatatttctccaacatggccgagttcctcaaa
gtcaagaaagagggaggagccaaagcgtga
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