Silurus meridionalis (southern catfish): 124384101
Help
Entry
124384101 CDS
T08004
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04810
Regulation of actin cytoskeleton
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124384101 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124384101 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124384101 (cyfip1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124384101 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
124384101 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
124384101
NCBI-ProteinID:
XP_046702615
LinkDB
All DBs
Position
1:33503664..33525889
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTTVSLEDALSNVDLLEELPLPDQQPCIEPLPSSLIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKMYLTPGEKHMLLKVMGFGLYLMDGNSSNIYKLDTKKRINLAKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWSCTSTGSSPQYNICEQMIQIREDHMRFI
SELARYSNNEVVTGSGRQEAQKTDTEYRKLSDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSGLEGPTILDIEKFHRESF
FYTHLLNFSDTLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILDMKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVLAGS
LLLDKRLRAECKNQGANISWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSMVELEGLMDINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNSSTNRFVRTVMPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IYGFYRNFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILSRIRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKYQIVNDEIFSILNKYMKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaccgtgtctctggaggacgctctgtccaacgtggacttgctggaggagctt
ccacttccagaccagcagccatgcatcgagcccctgccctcatcactcatataccagccg
aacttcaacaccaactttgaagatcgaaacgcctttgtgacgggaatcgcacgctacatc
gagcaagccactgtccactccagcatgaacgagatgttggaggagggccaggagtacgct
gtgatgctctacacttggagaagctgctcccgagccatcccacaggtgaagtgtaacgag
cagcccaacagggtggagatctacgagaaaaccgtggaggttctggagcccgaggtcacc
aagctgatgaacttcatgtacttccagcgcacggcgatcgatcgtttctgcggcgaggtg
cggcgcctgtgtcacgccgagcgcaggaaagacttcgtatccgaggcttacctgctcacc
ctgggaaagttcatcaacatgtttgccgtgctggacgagctgaagaacatgaaatgcagc
gtcaagaacgaccactcggcctacaaacgagcggcacagttcctgaggaaaatgtctgag
ccatcatctattcaggagtctcagaacttgtcgatgtttctggccaaccacaacaagatc
acacagtctctccagcagcagttagaggtgattaatggttatgaagagctcctggctgac
atagtcaacctctgcgtggactactatgagaacaagatgtacctcacgcctggggagaag
cacatgttgctcaaagtcatgggctttgggttgtacctgatggatggaaacagcagcaac
atctacaaactggacaccaagaagaggatcaacctcgccaaaatcgacaagtttttcaag
cagctgcaggtggttcctctgtttggagacatgcagatcgagctttcacgttacatcaaa
accagcgctcactttgaagaaaacaaatccaggtggtcttgtacatccacaggcagcagt
cctcagtataatatctgcgagcaaatgattcagattcgtgaggatcacatgcgttttatc
tctgaactggctcgctacagcaacaatgaggtggtgacaggatcaggacgccaagaggcc
cagaagacagacactgagtacaggaagttgagtgacctggccttgcagggccttcagctg
ctctctcagtggagtgctcaagtcatggaagtgtattcgtggaagctggtgcatccgaca
gacaaatattccaacaaggactgtcccgacaacgcggaggagtacgaacgggccaccaga
tacaactacaccagtgaagagaagttcgctctggtggaggtcatcgccatgataaagggg
ctgcaggtgctgatgggtcgtatggagagcgttttcaaccatgccatccgccacaccatc
tacgccgccctgcaggacttcgcccaggtcacgctgcgagacccgctgcggcaggctatc
aagaagaagaagaacgtcatccagagcgtcctccaggccatccgtaagaccatctgcgac
tgggagacgggacgagagcctcataacgaccccgctctgcgaggggaaaaggatcccaag
ggaggatttgatatcaaagtgccccgtcgcgccgtgggtccttccagcactcagctgtac
atggtgaggaccatgctggagtctctggttgcggataagagcggctcgaagaagacgctg
cgcagcggcctggaaggaccgaccatcctggacatcgagaagttccaccgggaatccttc
ttctacactcacctgcttaattttagcgacaccctgcagcagtgctgtgatctttcccag
ctctggttccgcgagttcttcctggagctcactatgggccgccgtatccagttccccatc
gagatgtccatgccctggatcctcaccgatcacatcctggacatgaaagaagcctcaatg
atggagtacgttctgtattctctggacctgtacaacgatagcgcacactacgctctcacc
aagttcaagaagcagttcctctacgatgagatcgaggctgaggtgaatctctgctttgat
cagtttgtctacaagctcgcggatcaaatatttgcctactacaaagtcttggcaggaagc
ttactcctggataaaagacttcgagcagaatgtaaaaaccagggagccaatatttcctgg
cctccgtccaaccgctatgagacgctcctgaaacagagacatgtccagctcttgggtcgt
tccattgatctgaaccgcctcatcactcagagagtctccgctgcgctctacaagtccctc
gagctggccatcaatcgcttcgagagcgaggacctcacctccatggtggagttggagggc
ttgatggacattaaccgaatgacccacaagctcctgagtaagttcctgaccctggacagt
atggacgccatgttccgtgaggccaatcacaacgtatctgctccgtacggcaggatcacg
ctgcacgtcttctgggagcttaactacgacttcctgcccaactactgttacaacagctcc
accaacaggtttgttcgtacagtgatgccgttctcacaggagttccagagagacaaaccg
cccaacgctcagcctcagtacctctacggctcaaaggcgttgaacttggcctacagtagc
atatacggtttctacaggaactttgttggtcctcctcatatcaaggccatgtgcagactg
ttggggtaccagggcatcgccgtggtgatggaggagctgctgaaggtggtcaagagcctg
ctccagggcaccattctgcagtatgtgaggactctgatggaggtgatgccaaagatctgc
cgcctgccacgccacgagtacggctctccagggatcttggagttcttccaccaccagctg
aaggacattgtggagtacgctgagctgaagaccgtatgcttccagaacctgagggaggtg
ggcaacgccgtgctcttctgtctgctcagtgaacagagcctgtctcaggaggaagtgtgt
gacctgctgcacgctgcacctttccagaacatcctccccagggttcacgtgaaagagggc
gagcggttggatgccaagatgaagcgtttggaggcaaaatacactgcgctgcacatggtg
cctttaattgagcgcctgggaactccacagcaaattgcgatcgctcgcgagggcgacctg
ctgaccaaagagcgtctgtgctgcggactgtccatgttcgaggtcatcctgtcgcgcatc
cgcggtttcctggacgacccgatttggcgcggcccgttacctagcaacggtgtgatgcac
gtggatgagtgtgtggagtttcacaggctgtggagcgccatgcagttcgtctactgcatc
ccggtcggagcgcacgagttcactgtggagcagtgttttggcgacgggctaaactgggcc
ggctgcatgatcatcaccctgctggggcagcagaggcgcttcgacatcctggactttagc
taccacctgctgaaggtgcagaaacacgacggcaaggacgagatcataaagagtgtgccc
ttgaagaaaatggtggaccgtatccgcaagtaccagatcgtgaacgatgagattttctcc
atcctgaacaagtacatgaaatcgggcgacggtgagaacatgccggtggaacacgtgcgc
tgcttccagccgccgatccaccagtccctggccagcaactga
DBGET
integrated database retrieval system
