Silurus meridionalis (southern catfish): 124384125
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Entry
124384125 CDS
T08004
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124384125
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124384125
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124384125
Ion channels [BR:
smeo04040
]
Other channels
Mechanosensitive channel (Piezo)
124384125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
124384125
NCBI-ProteinID:
XP_046702649
LinkDB
All DBs
Position
4:31349854..31491650
Genome browser
AA seq
2849 aa
AA seq
DB search
MQKSLGGNYYIIYNNKKIIKRPQRCGQFDEAKGEEDMASEMVCGLIFRLLLPVCLAAACL
FRYNVLSFVYLIYLLLIPLFAEPTKATMQGHTGRLLKSLCFTSLSFLLLHIIFQITINSL
LAGDNIEPNFNCSSWEKSIRQLGFESVRGADAGNGIRVFIPDIGMFIAGLVTYLLCRSLE
KPPGKDVVQHNTDFDMGNQEQDDDEEEEEGEEKDKKLELEPEMHLEEDFELGDEDYEPPD
EELEVGQEELEGFVLEEEESTKLKILRQITEVASRLKQIIGNLIETAGKVVVTILLGLTG
IMLPSLTSAMYFFTFLGLCTWWSFCRSFDALLFSCLCVLMAIFSAGHLIILYLYQFQFFQ
EAVPPGDHYASLFGISPVVLGNCSHTWMFKVNSELAWHHFVNPIMLLVLYYTLATLVRLW
LQEPADTVKEKEGEAELAEEKEEQLPGSTQFPQTAEKKRELWRMARYLPDERKVLIVTSN
GGPMDLVTLSRENRAVPADLYSSPKFKSQDGSSKERMDTSVYELSPVLSGVPGSPEKTVR
VNAMVKIFRFVMKQSYICALIAMMAWSITYVSWLTFVFLIWSCTLWMVRDRRKYAMITSP
FMVFYGDLLIVLQYIWSFQTLQPVPGLFLKKEVPFRELGSKILCLLSFWLLLRQALTERK
ERQRDETQLSDIRVEDSSQEKFMDGEVGGQREMMDVFGSMLMAMLNKYWIYICGGMFFFV
SFEGRIVMYKIIYMMMFLFCVALYQLNYERWRWMLKYFWMSVVVYTMLVLILIYTFQFES
SLHVWSNITGLSKEKLEDLGLERFSVPALFTRIFIPTSFLLVCILHLHYFHERFLQLTDI
KAVADKQKSTISRLVHLDGSLADLSMIKPEITSSVKDKEMEEKINLDEDGDDIKKREEEV
EDISDVFCKPASFSCHIKSEPEPDLGEDLKNKWHLVMDRLTVLFLKFLQYIHQLQLFIWW
LLELHVIKIVSSYIIWVSVKEVSLFNYVFLVSWAFALPFSQFRPLASSVCTVWTCVIIVC
KMLYQLTSIQPSTYSKNCSMPDNYTDVQRLDMARSILYSSPVDPANWVGLKKFSPLLENL
RNNLLMLALLAFEVTVYRHQDFYRMRNNLTAPVTRTIFHNITRQHLDDGIINCAKYFINY
FFYKFGLETCFLLAVSVIGQRMDFCAMLHAFGLIVVLYQRRRKAIAGVWPKYCCFLACML
TYQYLICIGIPPAACSDYPWRHPSSSIDSNVVKWLYLPDFHTKPNPLFLLYDFMLLLCAS
LQRHVFEEENDHAVRLLAGDNVEICRDLDAATFRQHNPVPDFIHCRSYLDMLKVIMFSYL
FWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGGELLLKPIKTILRYWDFLIAYNVFVI
TMKNILSIAACGYIKALVVNHCWLIQLFSLACTIKGYSRPEQQANKQCEPPSDEAGIIWD
SICFASLLLQRQVFMSYYFLHVVADIRSSQVLASRGAELFQATIVKAVKARLEEEKKSMD
LLKRQMDRIKSRQQKFKRGKERMLSLAQESGESQSHSREEVEDDGETSKEMRKGKRKQWW
RPWVDHASMVRSGNYYLFETDSEEEEEEEEKKEEDPPKRSAFQFVYHAWITDSKTAMKER
SKERRRFWQRYTEGRKTKKDQREAVHVAIEVGDQVEDTVEEERSDGPDNILKRVFNIVKF
SWELFLALLDSFTAWLNSMCQEYIDISTVLRTERCMLTHEVKKGNTPSRGIIHMYYQQQL
CRPSSSETVVDGAERLQVQHGSVSVQHEGREDESMDSVQNKNSLTSVYTESTMAYSQSTL
ESSEIGADRMPRTSERLRPKLRRLQGVEFSSSSSSSSAESSASAAVSENTQCTAFCSRQG
TGDIIEEQNHAREHPHCGDSWTSTELPEPSAIRRCSSEVQTLKGGLASEWDRALVSEQTT
WPQLSRFPSEADIPPSYSKATGLDSAGHVEEKNLRINEPNNSTLPSLSHELTASELLRNR
MFYDEELEESERFYCSQPQILQLCYALYNMLVAHSEMVCYLVIILNHMVSASVATLVLPI
LIFLWAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPFNQNIELDKTKPFHPPNII
GVEKKEGYVHYDLVQLLALFFHRSILKCHGLWDEDDTRSEAKMAMYKHSDSDSTEKPPVR
RERSSLTRNTLMETTHVRMPRKLSNTPSTLRRHSSSTGSHISHRSTRSRGGSSVTRSSVS
RAGSVLGVQQKSRKALVLEKFREQLIKARKFTVKITLNIVIPIRQFFCNLIHPEYSAVTD
VYVLMFLADTVDFIIIVFGFWAFGKHSAAADITSSLSEDQVPEAFLVMVLIQFATMVVDR
ALYLRKTVMGKVIFQVILVFGIHFWMFFILPGVTERRFSQNMVAQLWYFVKCIYFGLSAY
QIRCGYPTRVLGNFLTKSYNYVNLFLFQGFRLVPFLTELRAVMDWVWTDTTLSLSSWICV
EDIYAHIFVLKCWRESEKRYPQPRGQKKKKVVKYGMGGMIVMLLICIVWFPLLFMSLVKS
VAGVVNKPLDVSVTITLGGFQPIFTMSAQQNQLKDINEAEFLEFMNSYNYIPSAMQFLEA
YTSEDVTVAELEGSSNSLWTISPPSRKNLMEVLSKEDQFPVTMSWTIQRNLSLGAKAEIA
MDKHVTYLDMNTRQEIIELLNGTRNKAVVIQQVFPCFIRAPSDSNAKPIEQLYKDGDYKD
ILLDLERTNNSSGEIQEWWIVDQPSAEKINIRSGVKAERKGEAGLQLYVFNDKVSPPSLG
FLAGYGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPCVDRILKLCTDIFLVRETGEL
ELEEDLYAKLIFLYRSPETMIKWTREKTK
NT seq
8550 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatctttaggaggaaattattatattatatataataataaaaaaattattaaa
agacctcagaggtgtgggcagtttgatgaagcaaaaggtgaggaagatatggcctctgaa
atggtatgcggactcatcttcagactgcttctgccagtctgccttgctgcagcatgtctg
ttccggtacaacgtgctgtcttttgtctacctcatctacctcctgctcatcccgctgttt
gcagagccgacgaaggcaacaatgcaaggccacacaggacgtctgctgaaatccctgtgc
ttcaccagtttgtccttcctactgctgcacatcatatttcagatcaccatcaacagcctg
ctagcaggagacaacatcgagcccaacttcaattgttcatcatgggagaaatcaataaga
cagctgggctttgaaagtgtccgaggggcagatgcaggcaatggcatccgagtttttatc
ccagacattggcatgttcattgctggtctggtcacctatctcctgtgtcgcagtctggaa
aaacctcccgggaaagacgtagtgcaacataacactgactttgacatgggaaaccaggag
caggatgatgacgaggaggaggaagagggggaggagaaagacaaaaagcttgagctggag
cctgagatgcatctcgaggaagactttgagttgggtgatgaagactatgaaccacctgat
gaggaattagaagtagggcaggaagagctagaggggttcgtgcttgaggaggaagagagc
accaagttgaagatcctacggcagataacggaagtggcatcaagactgaaacaaatcatt
ggaaatctgattgagactgcagggaaagtagttgtaacaatattactgggccttacaggc
atcatgttgccctccctcacctctgccatgtacttctttacttttctgggcctgtgtacc
tggtggtctttctgccgttcgttcgacgctctgctctttagctgcctttgtgtactgatg
gcgatcttcagcgcaggacatttgatcatcctctacctctaccagttccagttcttccag
gaagctgttcctcctggagatcattatgccagtttgtttggtatatctccggtggtccta
ggcaactgttcccacacctggatgtttaaggtgaactctgagcttgcttggcaccacttt
gtcaaccccattatgctcctagtgctgtactacacgctggccacgcttgtacgcctgtgg
ctgcaggaaccagcagatacggtaaaagagaaagagggggaggctgaattagcagaggag
aaggaagaacagcttcctggaagcactcagttcccacagacagctgagaaaaaaagagag
ctgtggaggatggcacgctatctcccagacgagagaaaggtattgattgtgacatccaat
ggaggccccatggatctggtgactctgtcacgggagaacagggcggttcctgcagacctg
tactcttcccctaagttcaaaagccaggatgggtcaagcaaagagagaatggacaccagt
gtgtatgagctcagccctgtgttatcaggagtcccaggttcacctgagaagactgtccgt
gtgaatgccatggtaaagatatttcgctttgttatgaagcagagctacatctgtgccctc
attgccatgatggcatggagtatcacatacgtgagctggctgaccttcgtctttctcatc
tggtcatgcaccttatggatggtacgagataggaggaagtatgccatgattacttctccc
ttcatggtgttttatggggacctgctcatcgtgctgcagtacatctggagcttccagaca
ctacagcctgtcccgggcctcttcctcaagaaggaggtgccctttcgggaactgggctct
aagatcctgtgtcttctaagtttctggctacttctaagacaagctttgacagaacggaaa
gagcgacagagagacgagacacagttatctgatatcagagtggaggacagctcacaagag
aaatttatggatggtgaggttgggggacagagagagatgatggatgtgtttggcagtatg
ctcatggccatgttgaataagtactggatctatatctgtggaggaatgttctttttcgtg
agcttcgagggacgtatcgtcatgtacaagattatctacatgatgatgttcctcttctgt
gtagcactctatcagctgaactatgagcggtggagatggatgctgaaatacttctggatg
tcagtggtggtgtacaccatgctggtgcttatacttatctacacatttcagtttgagtcc
tctttacatgtctggtccaatataactggcttgagcaaagagaagctggaagatctaggc
ctggagaggttctctgttccagctctgttcacacgaatctttatccctacctccttcctg
ctggtgtgtatcctccacctgcactacttccatgaacgcttcttgcagctcactgacatc
aaggcagtcgctgacaagcagaaaagcaccatctccagacttgtacatcttgatggcagt
ttggcagatttatccatgataaaacctgagattacctcttcagttaaagacaaagaaatg
gaggaaaaaattaatcttgatgaagatggggatgatattaagaaaagagaagaagaagtt
gaagatatatctgatgtattctgtaagccggcaagtttttcctgccacataaaatccgaa
ccagagcctgatcttggagaagatctaaaaaataagtggcacctggtaatggacaggctg
accgtgcttttcctcaagtttctgcagtatatccatcagctgcagctcttcatttggtgg
cttctggagcttcacgttatcaagattgtgtcatcttacatcatctgggtttctgtcaaa
gaggtgtccctgtttaattatgttttcttggtgagttgggcttttgctctgcccttcagt
cagtttcgccctctggcctccagcgtgtgcaccgtttggacctgtgtaattattgtgtgc
aaaatgctttaccagcttacttctatccagccttctacatactccaaaaactgttccatg
ccggataactatacagatgttcagaggttggacatggccaggtctattctatacagcagt
ccagtagaccctgctaactgggttggtctcaagaagttctctccattactggagaattta
aggaataacctgttgatgttggccctactcgcatttgaggtaactgtctaccggcaccaa
gatttttaccgtatgagaaacaacctgactgctcctgtcaccaggacaattttccacaac
attacacgccagcacctcgatgatggcatcattaattgtgccaagtactttatcaactac
ttcttctacaaatttggtctagagacatgcttcctgttagctgtcagtgtcattggtcag
cggatggatttttgcgcaatgctgcatgcgttcgggttgattgtagtgctgtatcagcgc
cgaaggaaggccattgctggggtctggcccaaatactgctgcttcctggcctgcatgcta
acctaccagtacttgatatgcattggcatcccaccagctgcctgctcagactatccatgg
agacatccctcatccagcattgactctaatgtggttaagtggctttacctgcctgacttc
cataccaaaccaaaccctctctttctcctctatgattttatgttgctgctgtgtgcatcg
ctgcagagacatgtatttgaggaggagaatgatcacgcagtgcgtctcctggctggtgat
aacgtggagatttgtcgagacttagacgctgccacctttaggcaacacaaccctgttcct
gatttcatccactgcaggtcgtatcttgatatgctgaaggtgatcatgttcagctatctg
ttctggtttgtcctcaccatcatctttattacggggaccacacgcatcagcatcttctgc
atgggttacctggtagcctgtttctacttcttgttgtttggtggagagctgttactcaag
ccaattaaaaccattctgcgttactgggactttttgatcgcctacaacgtgtttgtcata
accatgaagaacatcctttctatagctgcctgtggttatattaaagccctggtggttaat
cactgctggctcatccagctgttcagtctggcatgcacaataaagggctattcacgaccg
gagcagcaggctaataaacagtgtgaaccgcccagtgatgaagcaggtatcatctgggat
agcatctgtttcgcctccctgctactgcagagacaggtcttcatgagttactacttcctg
catgttgtggctgatatccgttcttcacaggttttggcctccaggggagctgagttattc
caggccacaatcgtgaaggctgtgaaagcacgactcgaagaggagaaaaaatccatggac
ctgttaaagcgacagatggaccgaattaagagtcggcaacaaaagtttaagaggggaaag
gagaggatgttgagcttggcacaggaaagtggcgagagtcaatcacattccagagaagaa
gtggaagatgacggagagacgagtaaagagatgagaaaagggaaaaggaagcagtggtgg
agaccctgggttgatcatgcctccatggtgagaagcgggaattattatttgtttgagacg
gacagtgaagaagaagaggaagaagaggagaaaaaggaggaagatccacctaaaagatct
gcatttcaattcgtgtatcatgcgtggatcactgactccaaaacagccatgaaggagcgc
agcaaagagaggcggcgtttctggcagagatacacagagggacgtaaaaccaaaaaagat
cagcgggaggcagttcatgtagccattgaggttggagatcaggtggaggacacagttgaa
gaagagagatcagatgggccagacaacatcctgaagcgtgtgtttaatatagtgaagttt
tcctgggagctcttcctggcattattggacagtttcactgcctggctcaactctatgtgc
caggaatacattgacatctccacagtgctgcgaactgaacgctgtatgctcacacacgag
gtcaaaaagggaaacactccatctcgagggatcatacacatgtattatcagcaacaattg
tgcagaccttcgtcctctgagactgttgtggatggagcagagagactgcaagttcagcat
ggttctgtctcagtacagcatgagggcagagaggacgagagcatggactctgttcagaat
aaaaacagtctgaccagtgtatacactgaatccacaatggcatacagtcagtccactttg
gagtccagtgagatcggcgccgaccgcatgcccaggacgagtgagagacttcgaccaaaa
cttcgccgcttacagggagtggagttctcctcttcctcctcctcatcatctgctgaaagc
tcagccagtgctgcagtcagtgaaaacacacagtgcacagcgttttgctctcgtcagggc
actggtgatatcattgaagagcaaaatcatgctagagaacaccctcactgtggtgacagc
tggacctccactgagctgcctgagccctcagctatccgacgttgtagcagtgaggtgcag
actctcaaaggaggtttggcgtcagagtgggacagagcattggtatccgagcagactaca
tggccacagctcagtaggttcccttctgaggcagatattcctccctcctacagcaaggcc
acaggtctggactcagcaggtcatgttgaagagaaaaacctcagaataaatgaaccaaac
aacagcacacttccctcactgagccacgagcttacagccagtgaactgctgcgcaacagg
atgttctatgatgaagagctggaggaatctgagcgcttttactgctctcagccacagatc
ttacagctgtgctacgctctttataacatgctggtggcccactcggagatggtgtgctac
ctagtaattatccttaatcacatggtctcagcatcagtagccacactggtgctgcccatc
ctcatctttctgtgggccatgctgtctgtaccccgacctagcaaacgcttctggatgacc
gctatagtctacacagaggtgaccatagtgataaaatacttcttccagtttggtttcttc
ccctttaatcagaacatagagttggacaagaccaaaccatttcaccctcctaatataata
ggagtcgagaagaaagagggatatgtccattacgacctggtccaactgctggcactcttt
ttccatcgctcaattcttaagtgtcatggtctgtgggatgaggatgacaccagatcagaa
gcaaaaatggcaatgtacaaacactccgactcagacagcacagagaaacccccagtccgc
agagaaaggagttcactgacccgcaacactttaatggagactacacacgtccgtatgccg
agaaaactctctaacactccctctactttgcgccggcacagttccagtacagggtcacac
atttcccacagatcaacacgttccagaggaggcagttcagtcacgaggtcgagtgtgtca
cgagcgggcagtgtgttaggggttcagcagaagagtcgcaaagcgctagttttggagaaa
ttcagagagcaactcatcaaagccaggaaattcacggtcaaaataaccctgaatatcgtc
attccaattcgtcagttcttctgcaacctgatccatccagaatacagcgcagtgacagat
gtctatgtgctcatgttcctggctgataccgtcgacttcatcatcatcgtttttggattt
tgggcttttgggaaacactctgctgctgcagacatcacatcatctctgtcagaggatcag
gtccctgaagcgttcctcgtcatggtcctcatccagtttgcaactatggtggtggaccgt
gcactctacctgaggaagactgtcatggggaaggtcatctttcaggtcatactggtgttc
ggtatccacttctggatgttctttatacttccaggagtcactgagaggcgtttcagtcag
aacatggtggctcagctctggtactttgtaaagtgcatctactttggtctgtcagcctac
cagatccgctgcggctaccctacacgtgtgctgggcaactttctgaccaaaagctataat
tatgtcaacctttttctcttccaagggttccggttggttccattcctgactgagctgcgg
gccgtgatggactgggtttggacagacactactctgagcctctctagctggatctgtgtg
gaggacatttacgcacacatctttgtgctcaagtgctggagggaatcagagaaacggtac
cctcagccacgagggcaaaagaagaagaaggtggttaaatacggtatgggtggtatgatt
gtcatgctacttatctgcattgtgtggttcccactcctcttcatgtctctggttaaatcg
gtggccggcgtcgtcaacaaacccctagatgtgtcagtcaccatcacgctgggaggattt
cagccaatcttcacaatgagtgcacaacagaatcaactgaaagacatcaatgaggcggaa
ttcctagagttcatgaattcctacaactacattccgagcgcaatgcagtttctggaggca
tacacctcagaggatgtaactgtagctgagttagagggaagttctaactctctgtggacg
atcagcccacccagcaggaagaacctcatggaagtactgagcaaagaggaccagtttcct
gtcaccatgtcttggactatacagaggaatcttagtcttggagcaaaggctgaaattgcc
atggacaagcatgtgacatacctggatatgaatacaagacaagagataatagagttgttg
aatggaacgaggaacaaagctgtagttatacagcaggtctttccatgtttcattcgagca
ccaagcgactcaaatgcaaaacctattgaacagctctataaagatggtgactataaggac
atcctgctggacctggagaggaccaataacagcagtggtgagattcaggagtggtggatt
gtggaccagccatctgcagagaagatcaacatcagatctggggtgaaggcagagaggaag
ggcgaggctgggctgcagctctatgttttcaatgataaagttagtcctcccagcctgggc
ttcctcgctggctatggtatcatgggtctgtatgcctccgtggtgctggtcataggcaag
tttgtgcgtgaattcttcagtggcatctcacactcgatcatgttcgaggagctgccctgt
gtggatcgcatcctcaaactgtgcacagacatcttcctggtgagagagaccggagaacta
gagctggaggaagatctgtacgccaaactcatcttcctctaccgctcacctgagaccatg
atcaagtggaccagggagaagacaaaatga
DBGET
integrated database retrieval system
