Silurus meridionalis (southern catfish): 124384134
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Entry
124384134 CDS
T08004
Symbol
lmna
Name
(RefSeq) lamin
KO
K12641
lamin A/C
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04210
Apoptosis
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124384134 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124384134 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124384134 (lmna)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
124384134 (lmna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
FKBP15
ATG16
CCDC39
DUF4407
DUF6268
Laminin_II
IFT57
YabA
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
124384134
NCBI-ProteinID:
XP_046702672
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Position
4:19002072..19025822
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AA seq
664 aa
AA seq
DB search
MESPAQKRTTRGGASSMPSPTRITRLQEKEDLCNLNDRLAVYIDKVRSLEVENAGLRLRI
TESETEISRELSGMKAAYENELADARKTLDSVAKERARLQLELSKIREDYKELKARNSKK
EAELESALARLKDLEALLNSKDASLTTALGEKRTLETEVRDLKSQLAKLEGSLNDAKKQL
QDEMLRRVDAENRIQTLKEELEFQKNIYAEELRESKRRHESRVVEIDSGRPQDFESKLAE
ALIELRGQHEDQVRIYKEEIEKTFNAKLENARQSADRNSHLVGAAHEELQQTRVRMESMS
AQLSQLQKQLAAREAKVRELEESLSRERDLMRRRLEEKEKEMADMRHRMQQQLDEYQELL
DIKLALDMEISAYRKLLEGEEERLRLSPSPPPGRVISVTRTSGSGAHTQTRMAQSSTTRT
SSGSAKKRRLNDTDSEASSVTGGTVTRTRISQQASASGRVTVDEVDLEGKYVRLNNKSDQ
DQLLGHWQVKRQVGSGTPIIFKFPPKFTLKAGQTVTIWASGAGGTHSPPSDLVWKGQNSW
GSGDLFQTTLVNSSGEEMAMRKVTRTLFQEDDDEEMAAHSTCGDGEYNLRSRTVICGSCG
QPSDKAAGTCVSASSGVSSASRSYTSGGGGGLPEGLVSHSHSHFIFGNDKPRQGGPKPEN
CSIM
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccagctcagaagcgaacaacccgtggtggggcatccagcatgccctcgccc
acgcgtattactcgcctgcaggagaaagaggacctgtgcaacttgaacgaccgtctagca
gtgtacatcgataaggtgcgctctctggaggttgaaaatgcaggcctgcgactgcgcatc
acggagtcggagacggagatcagccgggagctgagcggcatgaaggcagcatacgagaat
gagctggcggatgctcgcaaaactctcgactcggtggccaaggagagagcccggctgcag
ctagagctcagcaagatccgtgaggactacaaggagctaaaagccaggaacagtaagaaa
gaggctgaactggagtcggctctggccaggctgaaggatctggaagctctcctcaactcc
aaggatgcttctctcaccacagccctgggagagaagaggactctggagactgaagtcagg
gatctgaagtctcagttagccaagttggaaggcagtctgaatgatgctaagaagcagctg
caggatgagatgctgaggagggtggatgcagagaaccgcatccagactttgaaagaggag
ctggagttccagaagaacatctatgctgaggagctgcgcgagtcgaagcgtaggcatgag
tcacgcgtggtggagattgacagcggtagaccgcaagactttgagagcaagctagctgag
gctctgattgaacttcgtggccagcacgaggatcaggtccgcatatacaaggaggagatt
gagaagaccttcaatgccaagctggagaatgcgcgtcagtctgccgataggaacagtcac
ctagttggagcagctcatgaggaactgcagcagacacgtgtgaggatggagagcatgtct
gctcagctgtcccagctccaaaagcagctggctgcccgggaggctaaagtgcgtgagctg
gaagagtctctgtctcgcgagagagatctcatgcgccgtcggttggaggagaaggagaag
gaaatggcagacatgcgccaccgcatgcagcagcagctggatgaataccaggagctgctg
gacatcaagctggctctggacatggagatcagtgcttaccggaaactgctagaaggagaa
gaagagaggctgcgtctctctccaagtcctcctcctggtcgtgtgatatccgtcactcgt
acctcaggctctggcgcacacactcaaacccgcatggctcagagcagcactactcgcact
tcatctggaagcgctaaaaaacggcgcctaaatgacacagacagtgaggcgtccagcgtg
actggtggaacagtgacacgcactcgcatttcccagcaggcatcagccagtggccgagtc
actgtggatgaggtggatctagagggcaaatatgtccgtctcaacaacaagtctgatcag
gaccagcttttgggccactggcaggtgaagagacaagtgggctctggtactccaatcatt
ttcaagttcccacctaaattcaccctcaaagcaggacagaccgttacaatctgggcctca
ggagctggggggacccacagtcctccttctgacctggtatggaagggtcagaactcctgg
ggaagtggagatctcttccagactaccctggtcaactcaagtggagaggagatggcaatg
cggaaagtgacacgcacactgttccaggaagatgatgatgaggaaatggctgctcatagt
acatgtggagatggagagtataacctgcgtagccgcacagtgatctgtggttcatgtggt
cagccatcagacaaggctgcaggcacctgtgtgtcagcgagctctggggtctctagcgcc
tctcgctcttacactagtggaggaggagggggacttcctgaaggcctggtctcccactcc
cactcccactttatatttggcaatgacaaacccagacagggtggtcctaaacctgaaaac
tgctccatcatgtag
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