Silurus meridionalis (southern catfish): 124384176
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Entry
124384176 CDS
T08004
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04540
Gap junction
smeo04814
Motor proteins
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124384176 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
124384176 (tubb5)
09142 Cell motility
04814 Motor proteins
124384176 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124384176 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124384176 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124384176 (tubb5)
04147 Exosome [BR:
smeo04147
]
124384176 (tubb5)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
124384176 (tubb5)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
124384176 (tubb5)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124384176 (tubb5)
Exosomal proteins of colorectal cancer cells
124384176 (tubb5)
Exosomal proteins of bladder cancer cells
124384176 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
124384176
NCBI-ProteinID:
XP_046702775
LinkDB
All DBs
Position
4:11990211..11995297
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGDEVA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgttcatatccaggccggtcagtgcggtaaccagattggtgccaagttc
tgggaggtgatcagcgacgaacatggcatcgacccaacaggaacctaccacggggacagc
gacctgcagctcgacagaatcagcgtctactacaacgaggctacaggaggtaaatatgtg
ccccgagctattctagttgatctggagccggggaccatggactcagtccgttctggacca
ttcggacagatcttcagacctgacaactttgtgtttggtcagagtggtgctggtaataac
tgggctaaaggccactacacagagggagcagagttggtggattctgttctagatgtggtg
cgtaaggagtccgagagctgcgattgcctccagggcttccagctcacccactctctgggc
ggcggcactggctctggtatgggaaccctgcttatcagcaagatccgtgaggagtatccc
gaccgcattatgaacaccttcagcgtggtgccttctcctaaagtgtccgacaccgtggtg
gagccctacaatgccacgctgtccgtccatcagctggtggaaaacacagacgagacctac
tgcattgacaacgaagctctgtacgacatctgcttccgcaccctgaaactaaccactccc
acttacggcgacctgaaccacctcgtctctgctaccatgagcggtgtcactacgtgcctg
cgtttccccgggcagctcaatgccgacctgcgcaagctggccgtcaacatggtacccttc
ccacgtctgcatttctttatgcctggtttcgcacctctgaccagcagggggagccaacag
tatcgcgcactcactgtgcccgagctcacacagcaggtattcgacgctaagaacatgatg
gctgcctgtgacccacgccacggtcgttacctgaccgtcgccgccgtgttccgtggccgc
atgtccatgaaggaggttgacgaacagatgctcaacgtgcagaacaagaacagcagctac
ttcgtcgaatggatccccaacaacgtcaagactgccgtttgtgacatcccaccacgcggg
ctcaagatggctgtcacctttatcggtaacagcaccgccatccaagagctgttcaagcgc
atctccgagcagtttaccgccatgttccgacgcaaggccttcctgcactggtacaccgga
gagggcatggatgagatggagttcaccgaggccgagagcaacatgaacgacctggtatct
gagtatcagcaataccaggacgctactgctgaagaagagggcgagtttgaggaggagggc
gatgaggttgcgtaa
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