Silurus meridionalis (southern catfish): 124384210
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Entry
124384210 CDS
T08004
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124384210 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124384210 (pex5)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124384210 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_8
TPR_17
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_20
TPR_Slam
ANAPC3
TPR_9
MAS20
TPR_10
Connexin50
PEX18_PEX21_C
DUF3915
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
124384210
NCBI-ProteinID:
XP_046702836
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All DBs
Position
4:complement(12950642..12969684)
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AA seq
641 aa
AA seq
DB search
MAMRELVEAECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIASEEELVNEFLQAP
PRPPQSFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWAAEFLSGADTAVSPAQA
GFDAADADWTREFINEVSDPGRWAEEYLEQSEEKLWLGDLGDKEQEREWTKEYQPGEDLK
QTANELLAKVDDPKLQNTQFLQFVRQIGEGSVTVEDRAGKQLADKAQAREAQNWASSFTK
VSEESAESWVDEFTQAGPDFQQAKAAVESDIDFWEKLQEEWEEMAKRDAEAHPWLSDFDQ
LLSTSYDKGYQFEEDNPYLSHEDPLTEGVKRMEAGDIPGAVRLFESAVQREPDNQLAWQY
LGTCQAENEQEFAAISALRRCIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNP
KYRNILEQRDREREREGVREREKERERFGSLLPEALFNEVQSLFLSAAAADPTRVDPQLQ
CGLGVLFNLSGEYDKAVDCFSAALSVTPQDYLLWNKLGATLANGNRSEEAVAAYRRALEL
QPGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAAGDLESGASRAPGSATSVMSDN
IWSTLRMALSMMGESSLYTAADRRDLDTLLAHFCQRDGETD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtagaggcggaatgtgggggagccaatcccctcatgaaattg
accggtcacatgacccaagaaggcggcgcttggagacacaggtcaacgcccactattccc
cccacgccgattgaaatagcctccgaggaagagctggtgaatgagtttttacaggcgccc
ccgcggcctcctcagagtttcgacatgggccaacttttggaagaaatgcagcaaatcgac
cagcagtcctacagacaggcaccacaaagagctccagacgtagccgcgttggcactatcg
ggtgactgggcggcagagtttctgtctggcgctgacaccgccgtctctccagcccaggca
ggttttgatgcagcagacgctgactggaccagagaattcattaacgaagtgtcagaccct
gggcgatgggctgaagagtatctagagcagtcggaggagaagctgtggttgggagatctg
ggagacaaggagcaagagagagaatggacaaaagagtatcaaccaggggaagatctaaaa
caaacagctaatgaacttcttgcaaaagtcgacgaccccaagcttcaaaacacacagttc
ctgcagtttgttaggcagattggcgagggcagtgtgacagtggaggacagagcaggaaag
caactcgctgataaagcacaggccagagaggcacagaactgggcatccagcttcacaaag
gtgtcagaagagtctgctgagtcctgggtagatgaattcacacaagcgggcccagatttt
cagcaggctaaagctgccgtggagagtgatatcgatttctgggagaagctgcaggaggag
tgggaggagatggctaagagagacgctgaggctcatccctggctgtctgactttgaccag
ctgctcagcacctcgtatgataagggctatcagtttgaggaagacaatccgtacttgtcc
cacgaggacccgctgacagagggagtaaagaggatggaagccggggacatccccggagcc
gtgcgcctgtttgagagtgcagtgcagagagaaccagacaaccagctggcctggcagtat
ctgggaacatgccaagcagaaaatgagcaagagtttgctgccatcagcgccctccgcagg
tgtattgagctcaagaaagacaatctgacagctctcatggctctggcggtcagcttcact
aatgaatcactgcaccggcaggcctgtgagacacttcgtgattggttgagacacaatccg
aagtaccggaatattcttgaacagagggacagggagagggaaagggaaggagttcgagag
agagagaaggagagagagagatttggatcactgctaccagaggctctgtttaatgaagtg
cagtcattgtttctgagtgcggcggctgctgatcccacgcgggtcgaccctcagctgcag
tgtggtctcggggttctcttcaacttgagtggagagtatgacaaggcggtagactgtttt
agtgctgccttgtctgttactccacaggattatttgttgtggaataagttaggagctacg
ctagccaacggaaatcgctctgaggaggctgttgctgcttacagaagggcgctcgaactg
cagcctgggttcgtgcgcagtcgctacaatctgggcatcagctgtgttaatcttggagct
cacagggaagcggtggagcattttttggaggcgctttctctccagaggcaagccgccggt
gaccttgaaagcggtgcgagtcgggcaccaggctccgccaccagtgtaatgtcggacaac
atctggtccaccctgcgcatggcactgagcatgatgggagagagttcgttgtacaccgcc
gccgaccggcgagatctggacacactactggcgcacttctgccagagggacggagagaca
gactga
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