Silurus meridionalis (southern catfish): 124384212
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Entry
124384212 CDS
T08004
Name
(RefSeq) toll-like receptor 13
KO
K18807
toll-like receptor 12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
smeo04054
]
124384212
Pattern recognition receptors [BR:
smeo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
124384212
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GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_5
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
124384212
NCBI-ProteinID:
XP_046702842
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Position
4:11044174..11052677
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AA seq
954 aa
AA seq
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MGMYKLTPVRSTLRFCSRFVLCFSMFTVVTALINEHCKTFKEHLLNDIGALCHYPPGLGP
YAECKGLDFQRDLSEVATGVRFLCIFTDSTMIPASAFSHLGTIEFLIIHGYNLRRVESGA
FSGLSNLKYLYVYFNDSNCSNIVLDKSVFAGLENLEVIHLKGINLSNIPNTTFEHLVSLV
NFSLDGVCVKELGDVLCKIPNEMSRLKSLKVLTSGITSIRSAQKGCSSWPFAVLAGIRVL
DLSLNPIKIIEADSLAVFRNLSSFSLNFNGVWLGQIWESGVRNLSRILFSGSITEKYALK
SKDMCQLVSKLNIHSLELTYVHLDSLSMEDFEDCGTELKELSIFYSNVKQLDLGFWRSIA
GTQTMELYRISLTEAAFCDAANGTVWNVTTLNLMENHLTVVKTHQFVCTPLLEQLLLSKN
AITTLEPEAFSGLYRLKILKLSTNKIKTLATDDFRSLRSLEVLLIDENVIEKIEEGIFRN
QEKLRELSFGRLEYVYKLPLNLLFYGFPEDLERLSIDANFGTAFSFGSMGRPKKNLTFEL
SGLELNMDNYTPFLESIREFKLNTRLFFYKIDFLVPFFTNLELLEFTADPEQLFINYTGI
NRLHYLKRLKLINLNFSNHTNPGMTFWNLKRLRILVLYNCRLNFLTKMMFRDLQSLELLN
LYSANPLTLKDGMFDALPVLSAVVLDRVDFQCDCDMGWFLEWAQSTRTQVINLQQQQCIW
HYQKLNLLSTMEKLCQTDVQYLCYLGTVNIISLLLVSALCYRFAYWPCVVLILRLRGYME
RRFGKFWWRRRQRQGLDDPEDDMKYDAFVSFSSRDEAWVLEELAPRLEEQGHPRLRLCLH
SRDFEVGKGIVDNIAECIYSSRRTVCVLTRQYLRSDWCGLEMRIATHRLLEEEKHRLILI
FLEHISLFELSNFHRLAKLVKSRTYLDWPQDKSERIHFWERLRRNIAEGEMDAP
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgtacaaactaacacctgtgcgttcgactctgcgtttctgctcgagattcgtt
ctgtgttttagtatgtttactgtagtcactgctctcattaatgagcactgcaagactttt
aaagagcatctcctcaatgacatcggtgccttgtgccattatcctcctgggctcggtccc
tacgccgaatgcaaaggtttagatttccaaagggatctttcggaggttgcgacaggagtt
cgatttctctgcattttcactgattcaacaatgattccagctagtgcgttctctcacctt
ggaacgattgaatttctaataatacatggctacaatctcaggagggttgaatcgggtgcc
ttctcaggcctttccaaccttaaatacttgtatgtttatttcaatgactccaattgcagc
aacattgtattggacaagtctgtgtttgctggattggagaatctagaagtcatccacttg
aaaggtattaatttgtcaaacattcccaatacgacatttgagcatttggtcagtttagta
aacttttctctggatggcgtttgtgtgaaagaacttggcgatgttttatgcaaaatccca
aatgaaatgtcccgcttgaaatctttaaaggtgttgaccagcgggatcacttctatcaga
agtgctcagaaaggatgttcgtcttggcctttcgctgtacttgcaggaattcgggtttta
gatcttagtctaaaccctattaaaataatagaggccgattctctggcagtgtttcgaaac
ctttcaagtttctcactaaattttaatggtgtttggctgggacaaatttgggagtctgga
gtcagaaacttgagcaggattttattttctggatccatcacggaaaaatatgctttaaag
tccaaagacatgtgtcaactagtttctaaattaaatatccactctctcgaactgacctat
gtacaccttgattcattgtcaatggaagatttcgaagattgtggaacagagcttaaagaa
cttagtatattttattcaaatgtcaagcaactggacctaggattctggagaagcatagca
ggaacacagacaatggagttgtataggatttcattaactgaagctgcgttctgtgatgct
gcaaacgggactgtttggaatgtaactactctgaatctaatggagaaccatctaaccgtt
gtgaaaacgcaccagtttgtttgcacccctctacttgagcaactactactttctaaaaat
gccattacaactctagaacccgaagcgttcagtgggttgtatcgtcttaagattctcaaa
ctttccacgaacaagatcaaaacgctcgcaaccgatgacttccgatctcttcgatctctg
gaagtcctgcttattgatgaaaatgtgattgagaaaatcgaagaggggatatttaggaat
caggagaagctgcgtgaactttcattcggaaggttggaatacgtctataagttacccctg
aacttactgttttatggttttccagaagatttggagcgtcttagcattgatgcgaatttc
gggactgcgttttctttcggaagtatgggaagacccaaaaaaaacttgacatttgaacta
agtggattggagctcaacatggacaactatactccctttttggagtccatccgagagttt
aaattaaatacccgcctttttttttacaagatcgactttttagttccttttttcaccaat
ctagaattgttagaatttacagctgaccctgagcagttgttcatcaattacacaggaatc
aacagattgcattatctcaagcgtcttaaactcatcaaccttaatttctcaaaccacacc
aatcccggaatgaccttctggaatctaaaacgcctacggatcctagtactctacaactgc
cgtctgaactttctgacaaagatgatgttccgagatctgcaatcattggaactgttgaat
ctctacagtgccaaccctttgaccttgaaggatgggatgtttgatgccctgccagtcttg
agtgctgtggtgcttgacagagtggactttcagtgtgactgtgacatgggctggttcctg
gaatgggcgcagagcacacgaacacaggtcatcaatctgcaacagcagcaatgcatctgg
cattaccagaaactgaatttgttgtccaccatggaaaaattgtgccagacagatgtgcag
tacttgtgctatttgggcaccgtcaacatcatcagtctgctgctggtcagtgctctctgc
tatcggtttgcctactggccatgcgtggtcttaatccttcgcctcagaggatatatggag
aggaggtttggtaaattttggtggaggagaaggcaaaggcagggactggatgatccagaa
gacgacatgaaatatgatgcattcgtgtcattcagcagccgtgatgaagcttgggtcctg
gaggagttggctccaaggttagaggaacaaggccaccccaggctgcgactctgcttgcac
agcagagactttgaggtgggaaagggaattgtcgacaacatcgcagagtgtatctacagc
agccggcgcacggtgtgtgttcttactcgtcagtatctgcgaagtgactggtgcggcctg
gagatgagaatagcaacgcaccggctgcttgaagaagagaaacatcgtctcattctcatc
tttctcgagcacatctccctatttgagctcagcaattttcaccgcttggccaagctggta
aaatcacgcacgtatttggactggccacaggacaagtcagagaggatacacttctgggaa
cgtctgagaagaaacattgctgaaggtgaaatggatgccccttaa
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