Silurus meridionalis (southern catfish): 124384231
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Entry
124384231 CDS
T08004
Name
(RefSeq) apolipoprotein A-I-like
KO
K08760
apolipoprotein A-IV
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
124384231
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Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
Apo-CIII
Fib_alpha
ApoLp-III
ZYG-11_interact
BAR_4
ApoO
FAM92
GldM_1st
DUF4456
DUF3164
Bacillus_HBL
FlaX
AcaB
DUF1204
UxuA
Exonuc_VII_L
DUF6401
DUF6507
Sec8_N
MAP65_ASE1
TolA_bind_tri
ASY3-like
AAA_13
Phage_Mu_Gam
CYP38_PsbQ-like
DUF885
Prominin
FUT8_N_cat
TetR_C_6
DUF5063
OmpH
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
124384231
NCBI-ProteinID:
XP_046702876
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Position
4:complement(10047325..10048678)
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AA seq
255 aa
AA seq
DB search
MRVLVVLVLAVATGCQANLFYADEPKPQLEQLTDAFWDYVAKATHTAEDTVKTIRESQLG
QEVNARFTDGTNMASEYAVTLQKQVSPFAQDIMTKIFQEAEVLKERLQQDLTTVKGKLEP
YSDDLKTQIQQKVEELRVAVAPYAESIDTEALKATMLQKTDELRGSLEEKVKELQSQMEP
YAEQLRQKVDQHLQEFQNAVAPLTDDLQTKVAERAALVQQGLAPYAEDLREKLDPYAQNL
KDQLTSLYESFTKTN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgcttgtggtacttgtgctggctgtagccacaggctgccaagccaacttgttc
tatgctgatgagcccaaaccacagctggaacaattgactgatgctttctgggattatgtt
gccaaggcaacacacactgcagaggacacagtgaaaacaattagagagtctcaacttggc
caggaagtcaatgctagatttacagatggcactaatatggccagtgagtatgctgtcact
ctccagaaacaagtgagcccttttgcccaggacatcatgaccaagatcttccaggaggct
gaggttctgaaggagcgtcttcagcaggatttgaccactgtgaagggcaaacttgagccc
tattctgatgatctgaagacccaaattcagcagaaagtggaggagctcagagtagctgtg
gctccctatgctgagtccattgacactgaagctctgaaagccaccatgctgcagaagaca
gacgagctcagaggaagtttggaggagaaagtgaaggagctgcagtcccagatggagccc
tatgctgaacaactcagacagaaagtagatcagcacctgcaggaattccaaaacgctgtg
gcccctctgactgacgatcttcagaccaaggttgctgagagagccgctttggttcagcag
ggtctggctccttatgctgaagatctgagagagaaactggacccctatgcccagaatctg
aaggaccagcttacctctctgtatgagtccttcaccaagaccaactaa
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