KEGG   Silurus meridionalis (southern catfish): 124384237
Entry
124384237         CDS       T08004                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124384237 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124384237 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124384237 (rab13)
   04031 GTP-binding proteins [BR:smeo04031]
    124384237 (rab13)
Membrane trafficking [BR:smeo04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    124384237 (rab13)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124384237 (rab13)
  Exosomal proteins of colorectal cancer cells
   124384237 (rab13)
GTP-binding proteins [BR:smeo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    124384237 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 RsgA_GTPase PduV-EutP Septin AAA_7 AAA FeoB_N AAA_22 AAA_16
Other DBs
NCBI-GeneID: 124384237
NCBI-ProteinID: XP_046702883
LinkDB
Position
4:complement(10132431..10144294)
AA seq 201 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLG
NKCDIEAKRKVSQEMGEKLAKDHGIRFFETSAKSSINVEESFLSLARDILMKSSMKPGSS
GREVRLTSPNPEKKTSKCLLL
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcaaagaaatacgacttcctctttaaattgctgctgattggtgatagcggagtggga
aaaacatgtctgatcatccggtttgcagaggataatttcaattccacatacatatcaact
atcggtattgactttaaagtgaagaccatcgaggtcgaggggaagaaagtcaagttgcaa
gtctgggacacagcaggacaggagagatttaagaccatcactacagcgtattacagagga
gctatggggatcatccttgtgtatgatattactgacgagaaatcctttgagaacattcaa
aactggatgaagagtatcaaggagaatgcatcagcaggagtgagtcgaatgctgctgggc
aataagtgtgacatcgaagccaagagaaaggtgtctcaggagatgggggagaagctcgca
aaggaccatgggattcggttctttgagacaagcgcaaagtcaagcatcaacgttgaggag
tctttcctttctctggctcgagatatattaatgaaatccagcatgaaaccgggctcatcc
ggccgtgaagtcagactcaccagccccaacccggagaaaaagacatccaagtgtcttctg
ttgtaa

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