Silurus meridionalis (southern catfish): 124384262
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Entry
124384262 CDS
T08004
Symbol
si:ch73-103b11.2
Name
(RefSeq) trichohyalin isoform X1
KO
K23792
myosin phosphatase Rho-interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124384262 (si:ch73-103b11.2)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
124384262 (si:ch73-103b11.2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH
PH_11
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
124384262
NCBI-ProteinID:
XP_046702920
LinkDB
All DBs
Position
4:complement(41266375..41347832)
Genome browser
AA seq
2355 aa
AA seq
DB search
MAGKENTCRKFQANIFNKSKCQNCFKPRESHLLSDDDYTQANPIYGGWLLLAPEGTNFDN
PLHRSRKWQRRFFLLYEHGLLRYALDEMASTLPQGTINLNVCVDVVDAESVTGQKHSLCI
CTPDREHYIRAENREVINGWQDALIVFPRTNKQNQKKKRKVEPPTPQEPGPAKVTVTSSS
VLCASNSVVQSDGAEPVRESERVIGGRKPRVESGYFSLEKPKPEQPLQEALSSLSSSSSS
SRLRYSTSEPALFLSLSSHNTHHTSLDTHTTHSDFTDTPTVSQSVDAPHTSPTAHTLQSP
SSCTSTNTHTLASPLSSSQSSLDSESSSERRSRDKRVGGANQSEAGGMNVKPGLGGRSYA
ALADVPRARRLSHREAFRSERKRQELRARTRSPGREEVERLFGHQRKRAQVIERFEMQQS
TDALEHMDTTENSSSSSQSTNQRTGRSERRLPAQKQDLSLDAGTGSVTDFSGRMAVYRRA
KSLDRRVTESSMTPDLLNFKKGWMTKLYEDGLWKKHWFVLTDQSLRYYRDSIAEEAVDLD
GEIDLSTCFDVTEFPVQRNYGFQIHSKEGLYTLSAMTSGIRRNWIQAVMKCVRPTISPDV
TRSVPDEHANAKTAPQTPEVSRPSHMWGQRSCDVTVDSASDHRKPRPRDRRREGRSKTFD
WAEFKNERAETLDTSSSPSPSSVSSSTSSPSSSVSDRKLIHWEQEVAPENKKGVGVASGV
PSVNKNSDVQVEIEERWHQVETTPLREEKQVPITGGSAPFSPGDKISAEFTEKELVKLQD
QNTLLQEQLHNAEQNAREGYVLQCTNEPVQPSSDSVSLSSRAPLQHLSKMNHELKTELET
QRRKHDLANQLVNNLRRSYSEAQDMLGHHEAEIEVLQAKLVSAMAEIIASEQAVARMRSE
LKLEQSRCHEREEECIRNETTLRAQLRDSEDRLRDVEASLLEKTQALRLLERQQALQRDQ
HKEVQRLQEKLTEVTKCLIATEEAQALREEREKKEHRCLEENYERERQGLSRRLAESEEK
RREAEEQLQEVQEQVETLLRGGVGEKKESEVSEEMLRLQQVLNEQADVIENLRESVRRLE
KERDHLTCRCQELVNQIAEADREVGKLQEQLKIEETDYYSLESSYERVSEEFARISRVLR
EKEEEVRQTKETYEKLVKQKDQDLNEALVKMAALGSSLEETEQRLKAKDELLSRVGHREV
EQDLQVKLAVAENRISELEEHLSALRLGFTNLKMERCCSQQDVLDALEEQAEHDISFSTT
SSLSLVRSSSETEVSFAKRQRIRFSNIQCQKYHQSQRIEKVQRDNTLIDFTQEERQDLVA
DTSLNITDDTIQDLSQDISLVSDNTFQYCSDTERFMSIIHALESKLQATEEKLKDMTSKM
QNEVCTVNASAEPEQDEPDDKSISCLDDIVQGSVTIEDYKKALGFVESCRVRVREILSDQ
NEKGGAEAQVHILAEIEKDLVKASLHIRQVATRYEGSLPCQTEPQAQVDKSAIKVLARML
AFEATVLEKIAFSLQDPKSELMQSLREINQDSQQVKTSHQDCLSAIYTDILTRKLKLQSM
LINELHQADSLSDQSDNLHIPDSVFAQNSIHNACISAELAYSLQNFKHSYQDKFEELQRD
LVKVKEILQQRDIVVTPDVGNKLEADTDIRSDVTPSELAPYEQQIKMEEAHTLAEEIVER
HLAEIMQSCVTESVASLYNTSESLITELKRQSKVLQHLSQQLGKACEEDNSSVICGLAGQ
IQAVLGPRDPGVLMCNSLSMHEALIQVQVAYVACRLRADHERELSLCQETSHNMATLVQE
HAQHVAAIQQRFQSSLEEERIQYFKTINSIQEENETLREEATMQLKEMSKKQKQIVQMEQ
DFQREIQEIKRKHAEELGRAMQGQATSELVLLERAENTQQTLETLLQDVEEAELRHKKHI
CKLEHELRGKVEELENVHQEEIQKLHDRYSQTIRTLGERLETIADDTQPPSTTEPQDAGH
LEEDKGHEQEVSRDSMSLLRSRVQELELQMMNMRDELENKPPDGDMAGLREKYQRDFDSL
KETCERGFAAMEETHQKVIEDLQRQHQREISKLLEEKERLLEEETNATIAAIEAMKNAHR
EELEKTQRAQLSGVSTDIEQLRIQYEEELQSIHRELEVLSEQYSQKCLENTHLAQALEAE
RHALQQCQRENQQLHTHNQELNNRLTVEISRMRSCYSGEKMPSPLTQGKDLYELEVLLRI
KDSEIQYLKQEINSLKDELQSALRDKKYASDKYKDIYTELSIVRAKADCDISKLREKLLA
ATEALGERDTPSHTPGYEMCVFTDIMKSKSNPDFSKKGHSAVSRQVRGMRSKSLKEGLTV
QERMKLFEAKDTRKI
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaaagagaacacctgccgcaagttccaggcgaacatcttcaacaagagcaag
tgccagaactgcttcaaaccccgagagtcacacctgctgagtgacgacgactacacacag
gctaatcctatatatggaggatggctgcttctggcacctgaaggaacaaactttgacaac
ccactacaccgatctcgaaaatggcaaagacgattcttccttctttatgaacacggactc
ctgcgctacgctctcgatgagatggccagcactcttcctcagggcactataaacctgaat
gtgtgtgtggatgttgtggacgcagagagtgtgacgggacagaaacactcactctgcatc
tgcactccggaccgagagcattacatcagagccgagaaccgtgaggttatcaatggatgg
caggatgctttgatcgtctttccacgtaccaacaaacagaaccaaaagaagaaacggaag
gtggagccgccaaccccacaggaacctggcccggccaaggtcacagtaacgagcagtagt
gtcctgtgtgccagtaacagtgtggttcagtctgatggagctgagcctgtgagagaatcg
gagcgtgtgattggaggacgtaagccaagggtggagagcggctacttttcattggaaaaa
cccaaacctgagcagcccttgcaggaagcgctatcttccctatcctcatcctcctcttcc
tctcgtctgaggtacagcacctcggaacctgcgctcttcctctccttgtcctcacacaac
acacaccacacttcacttgacacacacactacacactcagactttacagacacacccact
gtttcacaatctgtcgatgctccacacacatcgccaacagcacacacactgcaatctcct
tcctcatgcacctccaccaacacacacactctagcatcaccgctctcgtcctctcagagc
tctctcgactctgagtcgagctctgagaggcgaagtcgtgacaaaagagtgggtggagct
aaccaatcagaggctggaggaatgaacgttaagcctgggctaggtgggcggagctacgca
gcactggcagatgtcccccgtgccagaaggctgagccatcgcgaggcgtttcgttctgag
cgcaagcggcaagaactgagagcgagaacccgaagcccgggcagagaggaggtggagaga
ctgttcggccatcagaggaagcgtgctcaagtgattgaaagatttgagatgcaacagtca
acagatgcattggagcacatggacacaacagaaaactcctcctcctccagtcaatccacc
aatcagaggacaggacgcagtgagaggcgtctccctgctcagaaacaggatctctcatta
gatgctggaactggaagcgtaacggatttttccggaagaatggccgtgtacaggagagcg
aagagtctggaccgccgagttacagagtcgtccatgacgcctgatctactgaactttaag
aaaggatggatgacaaaactgtatgaggatggcctgtggaagaagcactggtttgttctt
actgatcaaagtctgagatattacagagactccatcgctgaagaggcggtggatctggat
ggagagattgatttgtccacatgttttgatgtcactgagtttccagtgcagaggaactac
ggctttcaaatccatagtaaggagggattgtatactctctctgcgatgacgtctggtatc
aggaggaactggatccaggcagtaatgaagtgtgtgagaccgaccatctcccccgatgtc
acacgttctgtcccagatgaacatgctaatgctaaaacagcccctcaaactcccgaagtc
tctcggccttcacacatgtggggtcaaaggtcatgtgatgtcactgtggattccgcctct
gatcaccgtaagccccgcccccgtgaccgcaggcgagagggccgatcgaaaacttttgac
tgggcggagtttaaaaacgagagggcagaaactttggatacaagctcctccccctcacca
tcctctgtttcatcttctacttcctctccctcctcgtcagtctcagacaggaagttaatt
cattgggaacaggaagtggctccagagaacaaaaaaggtgtgggtgtggccagtggagtt
ccgtcagttaataagaactctgatgtacaagtggagatcgaagagcggtggcatcaggtg
gagaccacgcccctcagggaggagaaacaggtcccaatcactggaggctccgcccccttt
tcacctggagacaaaatttcagcagagttcacggagaaggagttagtgaagctgcaagac
caaaacacacttctgcaggaacaactccataatgcagaacagaatgcacgggaaggttat
gtgttacagtgtaccaatgaaccagtgcagccttcatccgactccgtgtctctttcctcc
cgagctccattgcaacatctcagcaagatgaaccatgaacttaagacggagctggaaact
cagcgacggaagcatgatctggctaatcagctggttaacaacctgagacggagctatagt
gaggcacaggatatgcttgggcatcatgaggctgaaatcgaggttcttcaagcaaagctt
gtttctgcgatggccgagatcatagcaagtgagcaggcagtggctcgcatgcgcagtgag
ctgaagctagaacagagtcgttgccatgagcgtgaggaggagtgtattcgcaatgaaaca
actttacgcgcacaattgcgggacagcgaggatcgtctccgggacgtagaggcaagtttg
ttagaaaagacccaggcgctgagactcctggagagacagcaggccttgcaacgggaccag
cacaaggaagtacagaggctgcaggagaagctaaccgaggttactaaatgtctaattgcg
acagaggaggcacaggctctcagggaagagcgggaaaagaaagagcaccgttgcctggaa
gaaaattatgagcgtgagagacaaggactgagtcggaggctggcggaatctgaggaaaag
aggcgtgaggctgaggagcaacttcaggaagtccaggaacaagtagaaacacttctcaga
ggaggtgtaggtgagaagaaagaatcagaagtcagtgaggagatgctacgtcttcagcag
gttctaaatgagcaagcagatgtgattgagaaccttcgggagagtgtgagaaggttggaa
aaggagagagatcatcttacgtgtcgttgccaggaattggtgaatcagattgcagaggca
gacagagaggtaggaaaactgcaggaacagttaaagatagaagaaacagactactactct
ttggaaagctcatatgagcgtgtttcagaagagtttgcaagaatcagccgggttctgagg
gagaaggaggaggaagtcagacagaccaaggagacatatgagaagctggtgaaacaaaaa
gaccaggatttaaatgaagctcttgtcaagatggctgctcttggaagcagcctggaggaa
acggaacaacgcctgaaggcaaaggatgagcttcttagtcgggttgggcatagggaggtg
gagcaagatttgcaggtgaagctggctgtagcagagaaccgaatatctgaactggaagag
catctcagcgcattgcgtttggggttcacaaaccttaagatggaacgatgctgctctcaa
caggatgtccttgatgcactagaagaacaagcagagcatgatatatccttttctaccact
tcctctttgtctcttgtaagaagcagctcagagacagaagtgtcctttgccaagcgtcag
aggattcgcttctccaacatccagtgccaaaaataccaccagtctcaacgaatcgaaaaa
gttcagagagataacacattaatagattttactcaagaggagagacaggaccttgtggca
gatacaagtctaaacatcacagatgataccatccaggacttgtcccaggatatcagttta
gtaagtgacaacacattccagtattgcagtgatacagaaagatttatgtccatcatccat
gcactagaatcaaaactccaggcaacagaggagaagcttaaagatatgacatcaaagatg
caaaatgaagtatgtactgttaatgcctctgctgaaccagaacaggatgaaccagatgat
aaatccatctcttgcttggatgacattgtacagggaagtgtcacaattgaagattacaag
aaagctctgggttttgtcgagtcctgcagggttagagttagggagattctcagtgatcaa
aatgaaaagggaggagcagaagcgcaagttcatatattagcagagattgagaaagacctg
gttaaagcttctttgcacattaggcaagttgccacacgatatgaaggttctcttccctgt
caaactgagccccaggcacaggtggataaaagtgcaattaaggttcttgcgagaatgtta
gcctttgaagcaactgttttggaaaaaattgcattttctcttcaagatccaaaatcagaa
ctaatgcaaagccttagagagataaatcaagattcccaacaggttaagacaagccaccag
gattgtctttctgcaatttacactgatattctgacaagaaaactaaaactacagagcatg
ctgataaatgagctccaccaagcagatagtctgagtgaccagtcagacaatttgcatata
cctgatagtgtctttgctcaaaattcaattcacaatgcttgtattagtgctgaacttgca
tactcccttcaaaacttcaagcactcttaccaagacaaattcgaggaacttcaaagagac
ttggtaaaggtaaaagagattttgcagcaaagggatattgttgtgaccccagatgttggc
aataagcttgaagctgatacagacattcgttctgatgtcaccccttctgagcttgcccct
tatgaacagcagattaagatggaagaagctcacactcttgctgaagaaatagtagaaaga
cacttagctgaaataatgcagtcctgtgttacagaatcagtggcatcactgtacaacacg
agtgaaagtctcattactgagttgaaaagacaatcaaaagttcttcaacacttgtctcag
cagctggggaaggcatgtgaggaagataacagctctgttatttgtggacttgcaggacaa
atccaggcagttttaggacccagagaccctggagtcctaatgtgcaactctctcagcatg
catgaggctctgattcaggttcaggtagcttatgttgcctgtcgactgcgagctgaccat
gagagagagctatccctttgccaggagaccagccacaatatggccactttggtccaggag
catgcccagcatgtagcagccatccagcagcgtttccagagtagcctggaagaagaacgg
attcagtactttaaaacaataaactccattcaggaggaaaatgaaactcttcgagaggag
gctacaatgcagctgaaggagatgagcaagaagcagaaacagattgtacagatggagcag
gatttccagagggagattcaggagattaagagaaagcatgcagaagaattgggtcgggca
atgcaaggacaagcgaccagtgagctcgtgttgctggaacgtgccgaaaacacccaacag
acgttagaaaccttgctgcaagacgttgaggaagcagagctaaggcacaagaaacacatc
tgcaagctggagcatgaactccgtgggaaggttgaggaactggaaaatgtacatcaagaa
gagattcagaaactacatgaccgctacagtcagactattcgcactctcggggagagatta
gaaacgatagcagatgatacacaacctccatccacaacagagccacaagatgcaggtcat
ttagaggaggacaaggggcatgagcaagaggtcagcagggactcaatgtcactgctgaga
agccgtgtgcaggaactggagctacagatgatgaacatgcgtgatgaattggaaaacaag
ccaccagatggagacatggccgggctgcgagaaaagtaccagagagacttcgacagtctt
aaggagacatgcgagcgtgggtttgcagcgatggaggaaactcatcagaaggtgatcgag
gatcttcagcgccagcatcagcgtgagatcagcaaactgctggaggagaaggagaggtta
ctggaggaagagaccaacgccaccatcgctgcaattgaggcaatgaaaaatgcacatcgt
gaagaactggagaaaacacaacgcgcgcagctgagtggagtcagtacagacatcgaacaa
ttacgcatacagtacgaggaggagttacagtcaatccaccgtgagctggaggtgctatca
gagcagtattctcagaaatgtctggaaaacacacaccttgctcaggcactggaggccgag
agacacgcactgcagcagtgtcagagagagaaccaacaactacacacacacaaccaggaa
ctgaataatcgtttgacagtggagatttctcgcatgcgttcctgctacagtggagagaaa
atgccatcacctctcacacagggcaaagacctgtatgaactggaggtcctgctccgtata
aaggactcagaaattcagtatctgaaacaggagatcaactcactaaaggatgagcttcaa
tctgcactgagggataaaaagtatgcctctgataagtataaggacatctacacggagcta
agcatagtgagagctaaagccgactgtgacatcagtaaactgagggaaaaactactggct
gcgacagaagctctcggggaaagagacacaccctcacacacaccgggttatgaaatgtgt
gtgtttacagatatcatgaagtcaaaaagtaaccctgacttcagtaagaaaggtcactca
gctgtttccaggcaggtccgtggcatgaggtcaaagagtctgaaagagggattaacagtg
caggaacggatgaagctgtttgaagcaaaagacacgaggaagatctga
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integrated database retrieval system