Silurus meridionalis (southern catfish): 124384420
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Entry
124384420 CDS
T08004
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124384420 (nop2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124384420 (nop2)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124384420 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
124384420
NCBI-ProteinID:
XP_046703187
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All DBs
Position
4:complement(19858031..19867670)
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AA seq
746 aa
AA seq
DB search
MGRKLDPTTKVKRGPGRKARKQKGAETELAKILVDADEPKKLSSRARKRAVKRAQGATAP
KEEKQPKKGFSDENSEWLTPAKRKRKIDHSEGDEDSDSQWEEEEDDVDEVDDAVKGRKEL
LEDDDEDDDMVDDYGAMEDSEGEEQEEEEQEEAGSEGELLPIERAARKQKKRQEAAAQES
EDEDDDDDDDGEEEEEEDDDNMEGEEEEEEEEDTVQANIDHIDAFKLPSVKEREKEGLLP
LDLQSVHQRIKDNIDVLANFSEKREEGRERAEYLSLLKSDLCMYYSYNDFLMGNLMELFP
HSELIDFLEANEIQRPVTIRTNTLKTRRRDLAQGLINRGVNLDPLGKWSKVGLVIFDSSV
PIGATPEYLAGHYMLQGASSLLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGVIV
ANDASAERLKSVVGNIHRLGVTNTIICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDP
AVKTSKDSADILRSAHLQKELILAAIDSVNADSQTGGYLVYCTCSITVEENEWVVDYALK
KRNVKLVPTGLDFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTIPS
APTEENEKASETETPATPAEEKTSKSESKQQSKGTQGKSKETKQQLKAASSSKTESPTAK
KKPAIKGKKLKDEGPKKKIAKMDEQNSKEAKTKEKLKVLKVDKDIINESGTEKAEGSLLK
KKTNKKNQKNLFKRRKNKMGKTNLRS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagcttgatcccacaaccaaggtgaagcgtggacctggacgaaaagccagg
aagcagaaaggcgcagagactgagctggccaagattttagtggatgcagacgagccaaaa
aaactgtctagcagagcaagaaaacgtgctgtgaagagggcacagggggccactgcacca
aaggaagagaaacagcccaagaaaggattctccgatgagaacagcgaatggctgacacca
gctaagagaaagcgcaaaattgaccattcagaaggggacgaggacagcgacagccaatgg
gaggaagaggaagatgatgttgatgaagtagatgatgcagtgaaaggacgaaaagaacta
cttgaagatgatgatgaggatgatgatatggtcgatgactatggggcgatggaagatagt
gaaggagaagaacaggaggaggaggagcaggaggaggcaggcagtgaaggagagctgcta
cctattgaacgagctgcaaggaaacagaaaaaacgacaggaagctgcagcacaggagagt
gaagatgaggacgacgacgacgatgatgatggtgaggaggaggaggaagaagatgatgac
aacatggaaggggaggaggaggaggaagaggaggaagacacagtgcaggcaaatatcgac
cacatagatgcgttcaaactgcctagtgtaaaggagagagagaaagagggacttttgcct
ctagacctgcagagcgttcatcagaggatcaaagacaacattgatgttctcgccaacttc
agtgagaagagagaggaggggagagagagagcagagtacctttcactgctaaaatctgat
ctctgcatgtactacagctacaatgatttcctcatgggcaacctcatggagctgtttccg
cattctgagctcatagattttctggaagcgaatgaaattcagaggcctgtcaccattagg
accaatacccttaaaaccaggaggagagacttggctcagggtctgattaataggggtgta
aatctggatcctttgggaaagtggtcgaaagtgggcttggtcatctttgattcctcagtt
cccataggtgcaactcctgagtatctggctgggcattacatgcttcagggagcttcttca
ctgcttcctgtaatggctctttctccccaggagggggagtctgtgctggacatgagtgca
gctcctggaggaaagaccacatatatggctcagctgatgagaaacacaggagtgatagtt
gctaacgatgccagtgctgagaggttgaaaagtgttgtgggaaacatccatcgcctggga
gtcaccaacaccatcatttgtaactatgatggcagacagtttcctaaggtgatgggaggt
tttgacagagttttactggacgcgccttgttcaggcacaggggtcatctctaaagatcca
gcagtgaaaactagcaaggacagtgccgatatcctgcgctcagctcatctacagaaggag
ctgattctggctgctattgactcagtcaacgctgactcacagacgggtggctatcttgtc
tactgcacctgctccattacggttgaagagaatgagtgggttgtggattatgccctgaag
aagagaaatgtaaaactggttccgacaggattggactttggcaaagaaggctttaccaga
tttaaagagcgacgtttccacccttcacttaaactgtctcggagattctatccacactcc
cacaacatggatggattctttgtggcaaaactgaagaagttctctaataccatcccttct
gcacccacagaagaaaatgaaaaggccagcgaaacagaaacaccagctacaccagctgag
gaaaaaacctcaaaatcagagtctaagcaacagagcaaaggtacacagggaaaatccaaa
gagaccaagcaacaattaaaagctgctagcagcagcaaaactgaaagccccactgcgaag
aaaaagccagcgataaaaggtaaaaaattaaaggatgaaggtccgaaaaagaaaatagcc
aaaatggatgaacagaattcaaaggaagccaagaccaaagaaaagctcaaagttctaaaa
gtggacaaagacataataaatgagtctgggactgagaaagcagagggaagcttgcttaag
aagaagacaaacaaaaagaatcagaagaacctctttaaaagaaggaagaataaaatgggg
aaaactaatttaagaagttaa
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