Silurus meridionalis (southern catfish): 124384434
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Entry
124384434 CDS
T08004
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124384434 (ascc3)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124384434 (ascc3)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124384434 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_15
AAA_25
Motif
Other DBs
NCBI-GeneID:
124384434
NCBI-ProteinID:
XP_046703228
LinkDB
All DBs
Position
4:complement(22368930..22528867)
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AA seq
2203 aa
AA seq
DB search
MAPPRLTGALRSFSTVSKQEDVSLNQYDLKAKRLKRQELFAREGLNWAKVVQFFTQNLEK
KEQQRESRELKNLLQAAKQIVGADSGQDAIESAAVFLFKTFQNKEQVSHEETRAIKQMFG
PFPASAVETACAAVSQLVAQHGESQVEAFIQTQTSNKSTGTYFGQNITFSFETYALDSSD
SLPLDEDKGDGPSLDFNSFLSNHANGRSTGIESAGAQSVKQSSSADRSILRSEVEKYLSG
GNMGSSSVEELCTSLFEMLASTRSDDELQNELFEFLGPEGFEMISTLLQKRSDIVDSLLS
VPPDSRISYPPDGMLKNAESAKPTYGCQVTIQSEQERQMMKLYRREEKRERKRERRVDEG
DSSEAVFHLDPKELRLQREQALQTSRRSPLLPRQREYERIHYPNVYDTYAEATKTSAFIG
GCKMLLPESIHRESNKMFEQVEIPPNEPMPIGFQEKPVYITELDEIGQLVFKGMKRLNRI
QSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKVVYVAPM
KALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDVAS
FLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQMHDMEEVCYDKVLQQIKAGHQVM
VFVHARNSTVRTAMNMIEMAKNRGESLFFQPDHGPDYGNCEKQVQRSRNKQMREMFPDGF
GIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTMV
DLGILDVMQIFGRAGRPQFDKYGEGSIITTHDKLSHYLTLLTQQNPIESQFHASLADNLN
AEIALGTVTNVEEAVKWLSYTYLYVRMRANPLVYGINHKAYQMDPGLELYRKELVVEAGR
KLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNDLFNAQKTEADILSIVSKAE
EFEQVKVRDEELEELDQLLCSFCELPAAGGVENGYGKINILLQTYIGRGEVESFSLISDL
SYVAQNAARIMRALFEIALRKRWPAMTNRLLSLCKVIDKRLWGWAHPLRQFPTLPPTVLS
RLEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPAMLMEATIQPITRTVLRVR
LTITPDFRWNDQVHGSVGEPWWLWVEDPVNDHIYHSEYFLLQKKQVLSGEPQQVVFTIPI
FEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGNREYE
SLYKFTHYNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPDAKAVYIA
PLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQ
NRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARDL
ADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVL
IFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDVIATVRESNLKLTLAFGIGLH
HAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYFDGKTHRYVDYP
ITDVLQMMGRAGRPQFDDEGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLADHLNAEI
AAGTIASKQDAMDYITWTYFFRRLVMNPSYYNLGDTSHETINKYLSNLVERSLRDLESSY
CMEIQEDECTIDPLTYGRIASYYYLKHQTVRMFKERLKPELPIKELLSILTDAEEYAELP
VRHNEDQLNSELAQRLPLPVNPHSYDSAHTKTNLLLQAHFSRAQLPCSDYGTDTKTVLDN
AIRICQAMLDVVANEGWLVSALSICNLVQMIVQARWLHDSSLLTLPHIDQQNLYLFRKWS
SKGGKGGSKGYQGPIEGLPELIAACDGREEIFRAMVKDELESQQSAQVWSFLSHLPVLEV
SLSVKGCWEGSEEQAERALSASVTNIREKSSFLSVHADQEYVLQVSLQRLNAGRQRRKQD
SKAQAPRFPKPKDEGWFLVLGEVDKKELLAIKRLGYVRNRSVTSVAFYTPEQTGKCIYTL
YLMSDSYLGLDQQYDIHLNVIPANISAQVTTEVTDRMSDMNLK
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctcgacttaccggtgcattgcgctctttctctacggttagcaagcaggag
gacgtctcactcaaccagtatgatttaaaggccaaacgtttgaaaaggcaggagctgttt
gccagagagggtctgaactgggcaaaggtggtccaatttttcacacaaaatctcgagaag
aaggaacaacagcgagagtctcgggagctgaaaaatcttctacaagcggccaagcagata
gtgggtgcagattccggacaggatgccatcgaaagtgctgcagttttcttgttcaagacg
ttccagaacaaagagcaggtcagccatgaagagacccgggctattaagcagatgttcgga
cctttcccggcttcagcagtcgaaactgcctgtgctgcagtcagccagctggtggctcag
cacggagagtcccaggtggaagctttcatccagacccagacgtcaaacaagtctaccggc
acgtattttggacagaacatcaccttctcttttgagacgtatgccttagacagttcagat
agtctcccgttagacgaggacaaaggtgatgggccaagtctggacttcaacagctttttg
agcaaccatgccaacgggcgtagcactggtatagagagtgctggagcacagtccgtgaag
cagagcagcagtgctgaccgctccatccttagaagtgaggtggagaagtacctaagtgga
ggcaacatgggttcgtccagtgtggaggagctctgtacctcactgtttgagatgctggct
tccaccaggagtgatgatgaacttcagaatgagctgtttgagtttcttggtcctgaggga
tttgagatgatctcgacactcctccagaaaaggtctgatattgtggactctcttctgtct
gtgcccccagacagcagaatcagctacccgccagatgggatgctcaaaaatgcggagtct
gccaagcccacatatggttgtcaggtgaccattcaatccgagcaggaaaggcagatgatg
aaactctaccgccgggaagagaaaagggagaggaagagagagaggcgagtagacgagggc
gactcgtcggaagcggtttttcaccttgaccctaaggagctgagactgcagagagagcag
gccttgcagacctcacggcgttccccgttgttgccacgtcagagagaatatgagcgtatt
cactaccccaatgtgtacgacacatatgctgaagccaccaagacctctgccttcatcgga
ggctgcaagatgctgctgcctgagagcatccacagagagagtaataagatgtttgagcag
gttgagatcccgcccaacgagcccatgcccatcggcttccaggagaaacctgtctacatc
acagagctagatgagattggccagctggtgtttaaaggtatgaagcggctaaacaggatc
cagtcgatcgtttttgaaacagcctacaacaccaatgagaacatgctgatctgcgctccc
accggagcaggcaagaccaacattgccatgctcaccgttctgcacgagatccgccagcac
ctgcagccaggaggtgtcatccgcaaagaccagtttaaggtagtctatgtagctccaatg
aaggctttagctgctgagatgactaattacttcagtaagcgcttggagccactgggcatc
gctgtcaaagagctgacaggcgacatgcagctgaccaaaggggaaattctccgtactcag
atgttggtgacaacgccggagaagtgggacgtggtgacgaggaaaagcgtgggagacgtg
gctctgtcccaaatcgtccgcttgctcattttggatgaggtgcacctgctgcatgaggac
agaggacccgtcttggagagtctggtggccaggacgcttcggcaggtggagtcaactcag
agcatgattcgcatcctgggcctgtctgccacgctgcctaattacttggacgtggcatca
ttcctgcatgtgaacccctacattggcctgttcttcttcgacagccgattccgccctgtt
ccccttggacaaacgtttgttggaattaaaagcacaaataagattcagcagatgcacgac
atggaggaggtctgctacgacaaagtactgcagcagattaaagctggacatcaggtgatg
gtttttgtccatgctcgtaactccactgtgcgcacagccatgaacatgattgagatggcc
aagaaccgaggggagtcgttattcttccagccggatcatggacccgattacggcaactgc
gaaaagcaggtacagcgctcacggaataagcagatgagggagatgtttccagatggattt
gggattcaccacgctgggatgctgaggcaggaccgaacgctcatggagaacatgttctcc
agaggctacttaaaggtcctggtgtgcacagccactttagcctggggtgtcaacttgccc
gctcatgcagtcatcattaagggtactcagatctacgatgcaaagaggggtactatggtg
gatctgggcatcttggatgtgatgcagatttttggacgtgctggccgtcctcagtttgat
aagtatggagagggcagcattatcaccacccacgacaagctgagccactacctcaccctc
ctcacacaacagaaccccatcgagagtcagttccatgccagcctggctgataacctcaat
gccgagatcgctttgggaactgtgaccaacgttgaagaagccgtcaagtggttgagctac
acctacctctatgtacgaatgagagccaatccgcttgtttacggcatcaaccacaaggcc
taccagatggatccagggctggagctctacaggaaagagctagtagtagaagccgggcgg
aagctggataaagctcggatgatccgttttgatgagaggactggctattttgcttctaca
gaccttggtagaacagccagccacttctatataaaatacaacaccattgagacgtttaat
gatctgttcaacgctcaaaaaacagaagccgacattctgagtatcgtctctaaagcagag
gagtttgaacaggttaaggtacgagacgaggaactggaggaactggaccagttgttgtgt
tccttttgtgagctaccagcggctggaggagtggagaatggctacggcaagatcaacata
ctgctgcagacctacatcgggcgcggcgaggtggaaagcttctccctcatctctgacctg
tcttatgtggcccagaatgctgcacgtatcatgagggccctgttcgagatcgctctgagg
aaacgctggccagccatgaccaacaggttgctcagtctatgtaaggtcatcgataagcgt
ctgtggggatgggcacaccccctgcgtcagttccccacgctgcctccaactgtactctcc
aggctggaggagaagaacctcaccgtggacaagctgaaagatatgcgcaaagatgagata
ggtcacatgttacaccatgtgaatattggcctgaaagtgaagcagtgtgtccatcagatt
cctgccatgctgatggaagctaccattcagccgatcacgcggaccgtcctgcgcgtgcgc
ctcactatcacccccgacttcaggtggaatgaccaggtgcacggctcagttggagagcca
tggtggctgtgggtggaggaccccgtcaacgaccacatttatcattcagagtacttcctc
cttcagaagaaacaggtactgagtggggagcctcagcaggtggtgttcaccatcccaatc
tttgagcccatgccgtcacagtactacatccgtgctgtttcagaccgttggctgggctct
gaggccgtgtgcataatcaacttccagcacctcattttacctgaaagacatcccccacac
acagagcttctggacctacagccactgcctgtgacagcgttaggcaacagggagtatgag
agtctatataaattcacccattataatcccattcagacacaaatcttccacacactctac
cacaccgacaccaacgtgctgctcggagcaccaactggctcaggaaaaaccatcgccgcg
gagatggctatcttccgagtttttaacaagtatcctgatgctaaggcggtgtacattgct
cctctgaaagcactggtcagggagaggattgaagactggaaagttaggatagaggagaag
cttggcaaaaaggtggtagagctgactggtgatgtgactccagacatgcgggccatagcg
caggctgatttgattgtcaccactccagagaagtgggatggagtcagtcgcagctggcag
aatcgcagctatgttcagaaagtggccattcttattattgatgaaatccacctactcggg
gaagacagaggacctgttctggaggtcattgtatcgaggacaaactttatctcgtctcac
acctccaagactgtccgagtggtcgggctctccacagcactcgctaatgcccgagacctg
gcagattggctgggcatcggacaggtgggattgtttaatttcagaccgtcggttcgtcca
gtcccattggaggtacacatacaaggtttccctgggcagcactactgtcctcgtatggcc
agcatgaataaacccacctttcaagccatccgcagccattcccctgccaagcctgtcctg
atatttgtgtcatctcgacggcagacacgtctcactgcactcgacctgatcgcctttttg
gctacggaggatgacccaaagcagtggttacaccaggatgagcgagagatgacggatgta
attgccacagtgagggagtctaacctcaagctgacccttgcatttggcatcggtttgcat
cacgctggtctgcacgagagagacaggaagactgtggaagagctgttcgtcaactgcaag
attcaggtgttaatcgccactagtactttggcctggggtgtgaatttcccagcccatttg
gtgattgtgaaaggcacggaatactttgatgggaaaacacaccgttatgtggattaccca
attacagatgttctacagatgatggggagggcaggtagacctcagtttgatgacgagggc
aaagcggtcatccttgtacatgacatcaaaaaagatttctacaagaagttcctctacgag
cccttccctgtcgagtccagcctgcttggcgttctggctgatcatttgaatgcagagata
gctgcaggaaccattgcttccaagcaggatgccatggattacatcacctggacgtacttc
ttccgccgactcgtcatgaaccccagctactacaatttgggtgacaccagccatgagact
ataaacaagtacctgtccaatctggtggagagaagcctcagagatctggaaagttcttac
tgtatggaaatacaagaggatgagtgcaccatcgatcctctcacgtatggtcgcatcgcc
tcgtattattacctgaagcatcagactgttcgcatgttcaaggagagattgaagccagag
cttcccatcaaggagctgttgtccattcttactgatgcagaggaatatgctgaactgcca
gtgcgccataacgaagatcagctgaacagcgagctagcccagcggcttcctctgccggtc
aacccgcactcatacgacagcgctcacaccaaaaccaacctgctgttgcaggcccacttc
agccgtgctcagctgccctgcagcgattatggcacggacaccaaaaccgttctggacaac
gccatccgcatctgtcaggcgatgttggacgttgtggcgaacgaaggctggctggtgtct
gctctgagtatctgcaatctagtgcagatgattgttcaggctagatggcttcatgactcc
tctctgcttaccctgcctcatatagaccagcagaacctctacctcttcaggaaatggagc
tccaaaggtgggaagggtggaagcaaaggttatcaaggcccaatcgaagggcttcctgag
ctcatagctgcctgtgatggaagagaggagatctttagagcaatggtgaaggacgagctt
gagtcccaacagagcgctcaggtgtggtcttttctaagtcacttgcctgtgctggaggtc
agtttgagtgtgaagggctgctgggaaggctctgaggaacaggctgagcgtgctctgtcc
gccagtgtcaccaacatcagggagaagagcagctttctgtccgtgcacgctgaccaggaa
tatgtgctccaagtgtcgctgcagcgtctcaatgcgggccggcaaagaaggaagcaggac
agcaaggcgcaggctccacggttccccaagcccaaagacgagggctggttcctggtgctg
ggtgaggtagacaagaaggagcttctggccatcaaacgactgggatacgtccgcaaccgg
agcgtgacatcagtggccttctacacccctgaacagaccgggaagtgtatctacacactc
tacctgatgagcgacagttacctgggcttggatcagcagtatgacatccacctgaatgtg
attcctgccaacatctccgcccaggttaccacagaggtcactgacagaatgagcgacatg
aacttaaagtga
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integrated database retrieval system
