Silurus meridionalis (southern catfish): 124384438
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Entry
124384438 CDS
T08004
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124384438 (atxn1b)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
124384438
NCBI-ProteinID:
XP_046703239
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Position
4:8600964..8609664
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AA seq
812 aa
AA seq
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MKSNQERSNECLPPKKREILALEERQVLVASTVNESQSGENLAWLASVASMASMATVPNL
VPAQSHSTESSSPAPSTKALTLVTEYPLSTSVSNSSLSSFTNSTPAGGLSGTTTITANPA
VLSSSLPHVTGPIQPNQLPPNLQIIGPYTSYISSQILPAAASPTQSRRQAQELYATAAVI
PQASNGNPQKQHVISSLPNVAHTPSQCIQVESTPVGLPVISPSSQVPLQLHTHSTVLAPH
GLTLAPSQVLVHYTDGLITKQPDSQSRDLQNGALGEVTVVKHTTSIVKGLSNKPESDDAQ
RQIQNLGLPAQTQVLLPADYAAHDSAGLQTSVMLLSSSHLMANNSTELQSTQDKEHTSLA
RVERTRLSVGKPVSRVSSISLSSSESMAASLAPTLPPHTLLHTSPSAPTQEISTNLFSTT
QLPIIGYITSTSGAPQHSVASYHSNLSQHLVISGSPSLLIPVNAGNINTSSTESEVTRCS
ISTISAASVPTVATGLPQAYITAATPTATTSILPNGKDITGPEEHHAAAGIHSSTQVQLP
VLSTGVVAPPGPGLPPTPPSPQNAPLSPSSALPSFFMKGSIIQLADGELKRVEDLRTEDF
LQSAEVSRELKIDSSTVERIDSSRTPDAVIIQFSVGEHKAQVCVEVLVEYPFFVFGQGWS
SCCPDRTTQLLALSCAKLSVGDVCISLTLKSLKNGASRKDQTFGHVKNHNDSPHKAAKTS
GPTGAPQAQRENQRDANVFGLDLEHKFEGIGLKSPNSGKVQGAGSRKRRWSAPEKGEIER
SQENDQLETLPKLSFLSQELKVSIEGRSSMGT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgtagtaatgagtgcctgcctccaaagaagagagaaatcctg
gcgcttgaggagcggcaggtgcttgtagcatcaactgtgaatgagagccaaagtggtgag
aacctggcttggcttgctagtgttgccagcatggccagcatggccactgttcccaacctg
gttcctgcacagagccacagtactgaatcaagcagcccagcaccatcaaccaaagccctg
acactagtgacagagtacccactttccacctctgtctccaacagctctttgtcatcattt
acaaattccacacctgcaggaggtctctctggaacaacgacaataacagccaacccagct
gttctctcctccagccttccccatgtaacaggacccatccagcccaaccagctgccacct
aatttacaaatcattggaccctacaccagttatatctcctcccagatactaccagctgca
gcaagtccgacccagtcacgtagacaagctcaagagctttatgctactgccgctgtaatc
ccacaagcttctaatggaaacccacagaagcaacatgtgatttcatctttacctaatgta
gctcacacccctagccagtgcattcaggtagagagcacaccagttggtttgccagtgatt
tcaccatcttcacaagtaccccttcaacttcacactcattcaactgttcttgcccctcat
ggtttgactctcgctccctctcaggtgcttgtgcattataccgatggcctcatcacaaaa
caacctgactcccaaagcagagatctgcagaatggtgctctgggagaggttaccgtggtc
aaacacaccaccagcattgtgaagggattgtcaaacaaaccagaaagtgatgatgcccaa
aggcagattcagaacctgggtctaccagcgcaaactcaggtcttgctcccagctgactac
gctgctcatgacagtgcaggacttcagacatcagtcatgctattgtcaagcagccacctg
atggccaataatagcactgagcttcagagcacccaggataaagagcacacatctctggct
cgggtggagagaacaagactatctgtggggaaaccagtctctcgagtttcctccatttct
ctttcatcatcagagagcatggcagcatctcttgctccaactctcccccctcacacacta
ctgcatacatctccatctgcccccacccaggagatttctacgaaccttttctccaccaca
cagctgcctattattggatacattactagtacatctggggcaccccagcattctgtggcg
agttaccatagtaacctttcacagcatctagtgatctcaggcagtccctctctccttatt
cctgtgaatgctggcaacatcaacacatcgtctactgagtcagaggttactcgttgctct
atctcaaccatttctgctgctagtgtaccaacagtagccacaggtctgcctcaggcttac
atcactgcagccacacctactgctacaacctctattctccctaatggaaaagacatcaca
gggccagaggagcatcatgctgcagcaggtatacacagttcaacacaggttcaacttcct
gtgctttcaacaggggtagtagcccctccaggtcctgggctcccaccaacacccccaagc
ccacagaatgcacctttatctccatcatctgccctgccttcattcttcatgaagggctcc
attatccagctggcagatggagagcttaagcgggtggaggacctaagaacagaggacttc
ttgcagagtgcagaagtgagcagagaactaaaaattgactcgagcacagttgagcggata
gactccagcagaacacctgatgcagtcatcattcaattttcagttggggaacataaagca
caggtatgtgtggaggtgctggtagagtaccctttcttcgtgtttggtcagggatggtca
tcctgctgcccagaccgcactacacagttactggcattgtcatgtgccaaactctctgtt
ggtgatgtttgcatctccctcactctaaagagcctgaagaatggtgcatcaagaaaagac
caaacctttggtcatgtgaagaaccataatgacagtcctcataaagcagctaaaaccagt
ggaccgactggagcaccacaggctcaaagggaaaatcagagggatgcgaatgtttttgga
ttagacctggaacacaaatttgaaggtattgggcttaagagtcctaactctgggaaagtt
caaggtgcagggagtcgcaagagaaggtggtctgccccagagaaaggagagatagagcgg
tcacaagagaatgaccagctggaaaccctacctaaactttcctttctttctcaagagcta
aaggtcagcattgagggaaggtccagtatgggcacctga
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