Silurus meridionalis (southern catfish): 124384486
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Entry
124384486 CDS
T08004
Symbol
fars2
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124384486 (fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124384486 (fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124384486 (fars2)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
124384486 (fars2)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
124384486 (fars2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124384486 (fars2)
Prokaryotic type
124384486 (fars2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
124384486
NCBI-ProteinID:
XP_046703349
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All DBs
Position
4:32493794..32652644
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AA seq
476 aa
AA seq
DB search
MQRVMVLRLQQVYFPIMRLYCRSIYKPLSFLKLFELVVRPWPSTCLGSRTSTLSQRHCLH
THVSSQQPQITPESVEILGRIYPRDDMTNVTAKILSLVGRDLHNQKHHPLWIIKERIKEH
FYRSYTSRTGTPIFSVYDNISQVVTVEQNFDSLLIPKDHPSRKKGDNYYLNQTHMLRAHT
SAHQRELVRSGLDCFLLAGDVYRRDEIDASHYPVFHQMEGVRLFNNHELFARVENGEDLS
LFENSGRRTAQKQEIHTLEAVKLVEFNLKHTLTQLIRHLFGEELEIRWVECYFPFTHPSF
EMEVRFQGDWLEVLGCGVMEQELLHSAGAENKVGWAFGLGLERLAMVLFGIPDIRLFWSK
DERFLKQFHLTNINDSVTFQALGKYPPLFNDISFWLPAEGYTETDFYDLVRSIGGDLVEK
VELQDQFTHPKTNKVSHCYRIVYRHMERTLSQEEVRLIHQAIEQAAEQKLGVQGRF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggttatggttctgaggttgcaacaggtttactttccaatcatgaggctttac
tgtagaagcatttacaaacctctgtccttccttaaactctttgaacttgttgtccgccca
tggccaagcacctgcctcgggtccaggacctctacactatctcagagacactgcctccac
acacacgtctcctcccagcagccacagatcacccccgaatcggtggaaattcttggccgc
atctacccaagagatgacatgaccaatgtgactgcaaaaatcctgtccttggttggcaga
gatcttcacaaccagaagcaccatccattgtggatcatcaaagaacggataaaagagcat
ttttaccgttcctacacaagtcgaacaggaacgccaatcttttctgtatatgataacatc
agccaagtggtgactgtggagcagaattttgacagcctgcttatccctaaagaccaccct
agccgaaaaaagggggacaattactacttgaaccagacgcacatgctgcgtgcgcatacc
tccgcccaccagagggagctggtccgctctgggcttgattgcttcttgttagccggggac
gtctacaggagggatgagattgacgcaagccactatcctgtcttccaccagatggaggga
gtgcgactctttaacaaccacgagttgtttgcacgagtggagaatggcgaggatctgtcg
ctctttgagaacagcggtcgacgcacagcacagaagcaggagattcacactctggaggct
gtaaagctagtggagttcaacctgaaacacaccctcacgcagctcatcaggcaccttttc
ggagaagagttggagatccgctgggtggagtgctacttccccttcacacatccctccttc
gaaatggaggttcgttttcagggtgactggttggaagtgcttggatgtggtgtgatggag
caggagctgctgcactcagcgggagcagagaataaagttggctgggcttttggtttgggt
ctggaaagactcgccatggttctctttggcattccggatatccgactcttctggagcaag
gatgagcgcttcctgaaacagttccatctgaccaacatcaatgactctgtgacctttcag
gccctcggtaaatacccaccgctcttcaacgacatctccttctggctgccagctgagggc
tacacagagactgacttctacgatttggtgcgcagcatcggaggagatctggttgagaag
gtcgagctgcaggaccagttcactcatccaaagaccaataaggtgagccactgttaccgc
atcgtgtaccgccacatggagagaactttgagccaagaagaagtgcggctgattcaccag
gccattgaacaggcagctgagcaaaagctgggggtacaagggagattctga
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