Silurus meridionalis (southern catfish): 124384534
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Entry
124384534 CDS
T08004
Symbol
abcb5
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124384534 (abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124384534 (abcb5)
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124384534 (abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
Rad17
DUF2207_C
AAA_5
AAA_28
AAA_30
AAA_7
AAA_29
AAA_24
Zeta_toxin
AAA_15
Motif
Other DBs
NCBI-GeneID:
124384534
NCBI-ProteinID:
XP_046703432
LinkDB
All DBs
Position
4:complement(17322431..17337451)
Genome browser
AA seq
1338 aa
AA seq
DB search
MREDQNAEPQPDQEEGNPVGHLNLAFTQDEKYLNENPENPPGEDSKSKSNTKKKKKKKSD
KPKEQIKSVGLFQLFRYATCPEVFLMLIALVCAAIHGAALPIMCIVFGQMTDSFVQSGQT
FNITGNYSFNITLDPTLCVPIPGVDIEASMTTYAYYFVAIGAGVFFFGVFQVMLFVMTAT
RQTKRIRENYFHAILHQPMAWFDTHPIGELNTRLTDDINTINDGLGDKIAIFVQFFCRFL
TGVIIGFIFGWKLTLVILAVSPLLAGSAAVWSTILATLTSKELTSYAKAGAVAEEILVAI
RTVVAFNGQKKALDKYETNLVDAKNLGVKKAITTNVSMGLTQFFILGTYALAFWYGTKLS
VDEPENYSIGKVLTVFFSVMIGAFSLGQAAPNLESVAKARGAASAIYNTIDMPRPIDSSS
KEGYKPDTVKGDIEFKNIHFSYPSRKDVKILQGMSLKVPSGKTIALVGESGCGKSTTIQL
LQRFYDTDQGEVTLDGRDIRTLNVRWLRENVGIVSQEPVLFGTTIAENIRYGRENATDED
IEQAVREANAYEFISNLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEATS
ALDTQSEAIVQAALDKARAGRTTIVIAHRLSTIRSADIIAGFKDGQVVEHGTHRELMSKK
GVYYSLVTQQSQGNPDDDSDDDGEDFDFDEDDDEEEESSDNADDLMEVTIENNGIARNSI
RRSINLQRRESKRKSKKKLKKTKSKKKKKEKEKVEDVSFGRILALNKPEWPYMMVGILAS
FVGGAVYPCVAILFAKIIGVFAEPDPDVKRQKTLMFSLLFLLLGAVSFITYFLQGFMFGK
SGEILTMRLRSQAFKAILRQDIAWFDNHDNAVGVLTTKLATDASMVKGASGSRLGLAVGT
VCSLGIAVIIAFIYCWQLTLLILACVPFLIGSHFIQMRALGGHASKDQNALEMSGKISTE
VVENFKTVVALTREDVFFRKFNESLSKPYRSALCKAPIYGLTFAISQAIPFFVNAAIFRF
GSWLIAHCYTQYENVFLVFSVIVFSAMSIGQSSSFAPDFAKAKVATWRILDLLAKEPEID
IYSEAGDKPRNFKGDIAFHDVHFAYPTRPNTKILQGLNVSVAQGQTLALVGGSGCGKSTS
VQLLERFYNTASGEVLLDGVDSKKLNIAWLRSQLGLVSQEPILFDCTIAENIQYGDNSRV
VSQAEVEEAAKNANIHSFILGLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKVLLL
DEATSALDTESEKIVQKALDDARQGRTCIVIAHRLSTIQNADIIAVIQNGRVVEQGTHSE
LIAKQGAYYDLVNAQVSH
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggaccagaatgcagaaccccaaccagaccaagaggagggaaatcccgttggt
catctcaacttggccttcactcaagatgagaaatacttgaacgagaacccagagaatcct
ccaggggaggactccaaatccaaatcaaataccaaaaaaaagaagaaaaaaaagtctgat
aagccaaaggaacaaataaaatcagttgggctttttcagctgtttcgttatgccacctgt
ccagaggtcttcctgatgttgattgctcttgtatgtgctgctatacatggtgctgcactg
cccataatgtgtatagtgtttggacaaatgactgacagctttgtacaaagtggacaaacg
ttcaacatcacaggaaactacagctttaacatcacactggatcctacactctgtgttcct
ataccaggagttgacattgaagcatcaatgacaacatatgcctattactttgttgccatt
ggggctggggtttttttctttggagtgtttcaagtcatgttattcgtaatgacagccact
agacagaccaagcggatcagagagaattacttccatgcgatcctccatcagcctatggca
tggttcgacacacatcccattggagaacttaacactcgactcacagatgatataaacacc
attaatgatggcctgggagacaagattgcaatatttgtgcagttcttctgcagatttctt
accggtgtaattattggatttattttcggttggaagttgaccttagtcattttggcagtg
agtccactgctggcaggttcagctgctgtatggtctacaattcttgccactcttacaagt
aaagagttgacatcttatgccaaagcaggagctgtggcagaagaaatacttgtggctatt
aggacagttgttgcattcaatggtcaaaagaaagctctggataagtatgaaactaacttg
gtagatgcaaaaaaccttggagtgaagaaagctattactacaaatgtgtcaatggggcta
acacagttcttcatattaggaacatatgcccttgcattttggtatggcacaaagctctct
gtggatgaaccagaaaactactccattggaaaagtcctcactgtcttcttctcagtgatg
ataggggcattctctctgggtcaggcagctcccaacttggagagtgttgctaaagcccgt
ggtgctgcaagcgccatctacaataccattgatatgcctcgtcccattgacagcagttca
aaagaaggctacaaaccagacacggtgaaaggtgacattgaattcaaaaacattcacttc
agttacccttccagaaaggatgtgaagattctgcagggaatgagcctaaaagtgcccagt
gggaagacaattgctctggtgggggagagtggctgtgggaagagcaccaccattcagctg
ctgcagcggttttatgatacagatcaaggagaggtcaccctggatggtcgagatatccgc
actctaaatgtgcgttggctgagagaaaacgtgggcattgtgagccaggagcctgtactc
tttggcaccactattgctgagaacatacgctatggtcgtgagaatgccactgatgaggac
attgaacaagctgtgagagaggccaatgcttatgaattcatctctaacctaccagataag
ctgaacaccatggttggggagcgtggagctcaactgagtggtgggcagaagcagaggatt
gctattgctcgtgctttggtcaaaaatcccaaaatcctcttgctggatgaagccacatca
gccctggacactcagagtgaagctattgtccaggctgctttagataaggcaagggcaggc
cgaacaactatagtgattgctcaccgtctgtccacaattcgttctgctgatataattgct
ggcttcaaagatggtcaggtggtcgagcacggcactcacagggaactcatgagcaagaaa
ggagtctactattctcttgtcacacagcagtcacagggaaatccagatgatgacagtgat
gatgatggtgaggatttcgattttgacgaggatgatgacgaggaagaggaatcatccgac
aatgctgacgacttgatggaagtcacaattgaaaataatggaattgcaaggaattcaata
agacgtagcattaatcttcaaaggagagaatcaaaaaggaaatcgaaaaagaagttgaaa
aagaccaaatccaagaagaagaagaaggagaaggaaaaggttgaagatgtctcttttgga
aggattctggctctgaacaaacctgagtggccctacatgatggtgggcatactggccagc
tttgtgggaggagctgtctatccttgtgtggctatcctgtttgccaaaatcattggtgta
tttgctgagcctgaccctgatgtgaagcgacagaagactctaatgttctctcttctgttc
ctcctccttggggctgtgtcattcatcacctatttcctccagggcttcatgtttggcaag
tctggggagattttaaccatgaggctgaggagtcaggcatttaaagccattttgagacag
gacattgcctggtttgataatcacgacaatgcagtgggagttctaaccactaaattagca
acagatgcatcaatggttaaaggggcctcaggatctcgactgggcttggctgttggcaca
gtttgttccctaggcattgctgtgattatagccttcatttattgctggcaacttaccctt
cttatcctcgcctgtgtgccattcctcattgggtcccatttcatccagatgagagctctg
ggaggtcatgcatccaaagaccagaatgcattagagatgtctggcaagatatccacagaa
gtagtagaaaacttcaagactgttgttgcattaacaagagaagatgtcttcttccgcaag
tttaatgaaagcctgtctaaaccatatcggtctgccttgtgtaaagcacctatctatgga
ctcacctttgcgatttctcaagcaattcctttctttgttaatgctgcaatcttccgtttt
ggctcttggctgattgcacattgctacactcaatatgagaatgttttcctggtgttttca
gtcattgtctttagtgccatgagtatcggccagtcttcatcatttgccccagactttgcc
aaagctaaagttgcaacttggagaatcttagacttacttgcaaaagagcctgagattgac
atttatagtgaggcaggagacaaaccaagaaactttaagggagatatagcattccatgat
gtgcacttcgcatacccgacacgtccaaacacaaaaattctgcaaggcctaaacgtatca
gtggctcaaggacagacgctcgcactggtgggaggcagtggttgtgggaaaagcacatca
gtccagctgttggaacggttctacaacactgcaagtggggaagtgctactggacggggtg
gactcaaagaaactgaacattgcttggctgcgctctcagctgggtcttgtctctcaggag
cccatcctgtttgactgcactattgctgagaacatacagtatggagacaacagccgtgtg
gtcagccaggcagaggttgaggaggctgctaaaaatgctaatatccatagctttattctt
ggcctgccagagaaatacaacacacgtgtgggagataaaggcactcagatgtctggtggg
cagaaacagaggatagcaattgctcgagctttggtccgacaacctaaagtgctgcttctg
gatgaagctacttcagccttggacacagagagtgaaaagattgtgcagaaagccctcgat
gatgctcgacagggccgcacctgcatcgtcattgctcaccgattgtctactatccaaaac
gctgacatcattgcagttattcagaatggcagggtggttgagcaaggaacacacagcgag
ctaattgccaaacaaggagcatactatgaccttgtaaatgcccaggtctcccactaa
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