Silurus meridionalis (southern catfish): 124384569
Help
Entry
124384569 CDS
T08004
Symbol
scrt1b
Name
(RefSeq) transcriptional repressor scratch 1b
KO
K09219
scratch
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124384569 (scrt1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
124384569 (scrt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
DUF7479
zf-C2H2_15
HypA
zf-C2H2_11
zf-BED
DUF7565
Zf-C2H2_ZNF451
zf-C2H2_16
LIM
Motif
Other DBs
NCBI-GeneID:
124384569
NCBI-ProteinID:
XP_046703483
LinkDB
All DBs
Position
4:18698991..18702317
Genome browser
AA seq
270 aa
AA seq
DB search
MPRSFLVKKVKLDDFSCAELESAYGRSRSDLNLRIHDKGYISDYITPAVYDAETDGGVKV
PSPEPLYDGAHSDYQADSPRSDTTGGSINGDAAVNGGYTAHAFFITDGRSRRRAAAGARS
PARHTCTECGKSYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHVLTHDLR
HKCDVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSSFKHFKCA
RCSKTFALKSYLNKHYESACFKGALSPLQA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggtctttcctggtgaagaaggtgaagctagatgatttctcatgcgcagagctg
gaaagcgcctatggcaggtcaagatctgacctgaacctgcggattcacgataaaggttac
attagtgactacattaccccagcggtgtatgatgcagagactgatggcggcgttaaggtt
ccctctcccgagcccctgtacgacggcgctcacagcgattatcaggcggacagcccgcga
tcggacaccacgggcggctcgatcaacggcgacgcagcagtgaatggcggctacacggcg
cacgccttcttcatcacagatggccggtcgcggcgcagagcggccgcaggagcgcgcagt
ccggctcggcacacgtgcaccgagtgcggcaagtcttacgccacgtcctcaaacttgagt
cgccataagcagacgcaccggagcctggacagcaagatggccaagaagtgcccgacctgc
ggcaaggtgtacgtgtccatgccggccatggccatgcacgtgcttacgcacgacttgcgg
cacaagtgcgatgtttgcggcaaagcgtttagtcgcccttggctgctgcagggccacatg
cgctctcacacgggagagaagcctttcggctgcgctcactgcgggaaggcgttcgccgac
cgctccaacctgcgcgcgcacatgcagacgcactcgtccttcaaacacttcaagtgcgcg
cgctgcagcaagactttcgcgctcaagtcgtacctgaacaaacattacgagtctgcgtgc
ttcaagggcgcactgtcacctctccaagcgtga
DBGET
integrated database retrieval system
